Rroxscaffold_2G00079790
MYB Family

RNA polymerase II transcription regulator recruiting activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0004738
Physical Location & Seq
Reverse (-)
2759387 .. 2762021
2635 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00079790.1

Sequence Viewer

Length: 1386 bp
ATGAAGCCGGAGCCTCATCCGGAGAATGTCGACCTCAACACTCGTTTATTCAAACCTCCCTCACCTAATGGTGACTATAAGACAAACACTCTCTTTGAAAACCCCTCTCACTTTGAGAACCAAGACAGCAGGGGGATTGATCTGAATTATTCAGATCAATACCATCAGAGTTCTCCTCTCCTCGGTGGTAACCATTTCGGTGGTAGCACTGTTGAGGGCTCTTCATCAAACCCCTTTCGTGGGGTTGATCTCGCTACCATCAAAGGGTTCAATCAACCTTTTGATGCATGTTACAACCAGGCTGATAATCCCAACCTGCAATCAAACAATGTCAATATTTTCCCTTATGCCCCCACGGCAGCTGTTTCGTTTGCAGACAGCCAGAAGGCTGTCATGCATGGCGGGTGGGGGGACTACGATGACGCTCCTCCTCGTCGTCATCAAGACCAACACCATCACCAGATGCCAGACTGCCACCACCACCACCAGATGGCAGCTAAGCAGCCGTTGCCGGAGGCTACACAAGCGACAAGCTATGTCCAGCTTCCGCCCCTCGTCAATTTCCAAGAATTCGAATCAGCTACGCCTAGGGTTATGCTGCCATCAGCTGATGAGTACCACTCCCGTAGCATAACCCCTAAGGAAAATGAGCTTGGCAAGAAGAAGAGGCATTACAATAAAAAAGACAGTAAAGATGGGCGCGAAGCAATGATCATCAAGGGGCAATGGACGCCCCAGGAAGACAGACTACTGACAGAGCTAGTGGAGAGATATGGGGATAAAAAGTGGTCTCAAATTTCTAAGGTGCTGAAAGGTCGAGTCGGAAAACAGTGTAGAGAAAGATGGCACAACCATCTCCGGCCTGACATTAGGAAAGAAATGTGGAGCGAAGAAGAGGATAAGATCCTGATCGAGGTGCACAAACAGATCGGAAACCGGTGGGCCGAGATCGCCAAGAGGCTTCCGGGAAGGACCGAGAACACTATCAAGAACCACTGGAACGCCACCATGAGGAAGCGATACCTCAAGAGAAAACTGACTACCAGTATCAATCGGAACATTATGGACTCCTCCGCTAGCTACATTAATGAGAGCACTGTCCTGTCCAACTACATCAAGAGCGTGGTGAAATCCTCGGCCGCTGCTTCGGCCGAAAAGAAGAAGGGGAAGACTGCAGTGGTGTATGGTGAACAATCAAGTCTGCAAAATTTACCTGAGTCCGACGTCTATCATCCCCAGTTTGAGAAGGGTAACGGTGCAATGGTGTATGGTGAACAATCAACAAGTTTGCACGATCTACCTATTTCCGAAGTCTATCGTCCCCAGTTCGAGCCTAGCTCTTACAATATGGAATGGGCGGCTTCGGTGGCAGCCCCGCTGCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000278 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006109 GO:0006355 GO:0006357 GO:0006935 GO:0007049 GO:0007275 GO:0008150 GO:0009553 GO:0009605 GO:0009790 GO:0009791 GO:0009793 GO:0009856 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009960 GO:0009987 GO:0010154 GO:0010183 GO:0010228 GO:0010262 GO:0010439 GO:0010468 GO:0010556 GO:0010557 GO:0010565 GO:0010604 GO:0010628 GO:0010675 GO:0019216 GO:0019217 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0040011 GO:0042221 GO:0042304 GO:0042330 GO:0042592 GO:0042762 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043455 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0044706 GO:0045595 GO:0045691 GO:0045697 GO:0045723 GO:0045834 GO:0045893 GO:0045923 GO:0045935 GO:0045995 GO:0046889 GO:0046890 GO:0048229 GO:0048316 GO:0048518 GO:0048519 GO:0048522 GO:0048580 GO:0048581 GO:0048608 GO:0048731 GO:0048856 GO:0048868 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0050918 GO:0051093 GO:0051171 GO:0051173 GO:0051239 GO:0051241 GO:0051252 GO:0051254 GO:0051704 GO:0055081 GO:0055088 GO:0055089 GO:0060255 GO:0061458 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0080050 GO:0080090 GO:0097159 GO:0140110 GO:1900376 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1904095 GO:2000014 GO:2000026 GO:2000034 GO:2000112 GO:2000241 GO:2000242 GO:2000692 GO:2001141 GO:2001279 GO:2001280
KEGG Pathways
Metabolic & Signaling
ko04151 ko05166 map04151 map05166
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

461

Amino Acids

52.49

Weight (kDa)

8.19

Isoelectric Point (pI)

53.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 240 - 286 1.5e-16 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 243 - 298 1.3e-18 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 292 - 334 2.8e-16 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 295 - 338 1.2e-10 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1227
Acc36I ACCTGC 1 cut(s) 324
AccB7I CCANNNNNTGG 1 cut(s) 490
AccI GTMKAC 1 cut(s) 30
AccII CGCG 1 cut(s) 702
AccIII TCCGGA 1 cut(s) 19
AciI CCGC 6 cut(s) 402, 548, 1074, 1140, 1358, 1376
AclWI GGATC 1 cut(s) 898
AcoI YGGCCR 2 cut(s) 1137, 1149
AcsI RAATTY 3 cut(s) 569, 795, 1207
AcyI GRCGYC 2 cut(s) 731, 1224
AfaI GTAC 1 cut(s) 617
AfiI CCNNNNNNNGG 7 cut(s) 182, 239, 240, 264, 490, 913, 1011
AgeI ACCGGT 1 cut(s) 936
AgsI TTSAA 3 cut(s) 52, 98, 271
AjnI CCWGG 2 cut(s) 297, 735
AjuI GAANNNNNNNTTGG 2 cut(s) 636, 668
Alw21I GWGCWC 2 cut(s) 921, 1097
Alw26I GTCTC 1 cut(s) 795
Alw44I GTGCAC 1 cut(s) 917
AlwI GGATC 1 cut(s) 898
Aor13HI TCCGGA 1 cut(s) 19
AoxI GGCC 4 cut(s) 860, 942, 1137, 1149
ApaLI GTGCAC 1 cut(s) 917
ApeKI GCWGC 7 cut(s) 359, 494, 502, 598, 1142, 1370, 1378
ApoI RAATTY 3 cut(s) 569, 795, 1207
AseI ATTAAT 1 cut(s) 1086
AsiGI ACCGGT 1 cut(s) 936
AspA2I CCTAGG 1 cut(s) 587
AspLEI GCGC 1 cut(s) 702
AspS9I GGNCC 2 cut(s) 942, 972
AsuC2I CCSGG 1 cut(s) 966
AsuHPI GGTGA 6 cut(s) 54, 83, 449, 1138, 1199, 1283
AsuII TTCGAA 1 cut(s) 573
AsuNHI GCTAGC 1 cut(s) 1076
AvaII GGWCC 1 cut(s) 972
AvrII CCTAGG 1 cut(s) 587
AxyI CCTNAGG 1 cut(s) 639
BaeGI GKGCMC 1 cut(s) 921
BanII GRGCYC 1 cut(s) 221
BarI GAAGNNNNNNTAC 4 cut(s) 656, 688, 732, 764
BbsI GAAGAC 2 cut(s) 747, 1175
Bbv12I GWGCWC 2 cut(s) 921, 1097
BbvI GCAGC 7 cut(s) 371, 506, 514, 585, 1129, 1365, 1382
BccI CCATC 8 cut(s) 171, 266, 462, 484, 610, 689, 837, 861
BceAI ACGGC 2 cut(s) 372, 490
BcgI CGANNNNNNTGC 2 cut(s) 348, 382
BciT130I CCWGG 2 cut(s) 299, 737
BclI TGATCA 1 cut(s) 711
BcnI CCSGG 1 cut(s) 966
BcoDI GTCTC 1 cut(s) 795
BfaI CTAG 4 cut(s) 588, 761, 1077, 1335
BfmI CTRYAG 1 cut(s) 1173
BfuAI ACCTGC 1 cut(s) 324
BglI GCCNNNNNGGC 1 cut(s) 356
BisI GCNGC 9 cut(s) 360, 495, 503, 599, 1140, 1143, 1359, 1371, 1379
BlnI CCTAGG 1 cut(s) 587
BlpI GCTNAGC 1 cut(s) 498
BlsI GCNGC 9 cut(s) 361, 496, 504, 600, 1141, 1144, 1360, 1372, 1380
Bme1390I CCNGG 3 cut(s) 299, 737, 966
Bme18I GGWCC 1 cut(s) 972
BmgT120I GGNCC 2 cut(s) 942, 972
BmiI GGNNCC 1 cut(s) 12
BmrFI CCNGG 3 cut(s) 299, 737, 966
BmrI ACTGGG 2 cut(s) 1231, 1318
BmsI GCATC 2 cut(s) 274, 453
BmtI GCTAGC 1 cut(s) 1080
BmuI ACTGGG 2 cut(s) 1231, 1318
BpiI GAAGAC 2 cut(s) 747, 1175
BplI GAGNNNNNCTC 6 cut(s) 160, 192, 605, 637, 1322, 1354
Bpu1102I GCTNAGC 1 cut(s) 498
Bpu14I TTCGAA 1 cut(s) 573
BpuEI CTTGAG 1 cut(s) 1010
BpuMI CCSGG 1 cut(s) 966
BsaBI GATNNNNATC 1 cut(s) 908
BsaHI GRCGYC 2 cut(s) 731, 1224
BsaI GGTCTC 1 cut(s) 795
BsaJI CCNNGG 5 cut(s) 181, 354, 587, 735, 1134
BsaWI WCCGGW 2 cut(s) 19, 936
Bsc4I CCNNNNNNNGG 7 cut(s) 182, 239, 240, 264, 490, 913, 1011
Bse118I RCCGGY 1 cut(s) 936
Bse1I ACTGG 4 cut(s) 1001, 1044, 1237, 1324
Bse21I CCTNAGG 1 cut(s) 639
Bse3DI GCAATG 3 cut(s) 714, 731, 1266
Bse8I GATNNNNATC 1 cut(s) 908
BseAI TCCGGA 1 cut(s) 19
BseBI CCWGG 2 cut(s) 299, 737
BseDI CCNNGG 5 cut(s) 181, 354, 587, 735, 1134
BseGI GGATG 2 cut(s) 16, 1231
BseJI GATNNNNATC 1 cut(s) 908
BseLI CCNNNNNNNGG 7 cut(s) 182, 239, 240, 264, 490, 913, 1011
BseMI GCAATG 3 cut(s) 714, 731, 1266
BseMII CTCAG 1 cut(s) 1206
BseNI ACTGG 4 cut(s) 1001, 1044, 1237, 1324
BseRI GAGGAG 5 cut(s) 165, 170, 417, 420, 1060
BseSI GKGCMC 1 cut(s) 921
BseX3I CGGCCG 2 cut(s) 1137, 1149
BseXI GCAGC 7 cut(s) 371, 506, 514, 585, 1129, 1365, 1382
Bsh1236I CGCG 1 cut(s) 702
Bsh1285I CGRYCG 2 cut(s) 1140, 1152
BshFI GGCC 4 cut(s) 862, 944, 1139, 1151
BshTI ACCGGT 1 cut(s) 936
BsiEI CGRYCG 2 cut(s) 1140, 1152
BsiHKAI GWGCWC 2 cut(s) 921, 1097
BsiSI CCGG 6 cut(s) 8, 20, 512, 859, 937, 965
BslFI GGGAC 2 cut(s) 425, 1305
BslI CCNNNNNNNGG 7 cut(s) 182, 239, 240, 264, 490, 913, 1011
BsmAI GTCTC 1 cut(s) 795
BsmFI GGGAC 2 cut(s) 425, 1305
BsnI GGCC 4 cut(s) 862, 944, 1139, 1151
Bso31I GGTCTC 1 cut(s) 795
Bsp119I TTCGAA 1 cut(s) 573
Bsp1286I GDGCHC 3 cut(s) 221, 921, 1097
Bsp13I TCCGGA 1 cut(s) 19
Bsp143I GATC 9 cut(s) 139, 154, 247, 711, 903, 909, 927, 948, 1294
Bsp1720I GCTNAGC 1 cut(s) 498
BspACI CCGC 6 cut(s) 402, 548, 1074, 1140, 1358, 1376
BspANI GGCC 4 cut(s) 862, 944, 1139, 1151
BspCNI CTCAG 1 cut(s) 1207
BspEI TCCGGA 1 cut(s) 19
BspFNI CGCG 1 cut(s) 702
BspLI GGNNCC 1 cut(s) 12
BspMAI CTGCAG 1 cut(s) 1177
BspMI ACCTGC 1 cut(s) 324
BspOI GCTAGC 1 cut(s) 1080
BspPI GGATC 1 cut(s) 898
BspQI GCTCTTC 1 cut(s) 226
BspT104I TTCGAA 1 cut(s) 573
BspTNI GGTCTC 1 cut(s) 795
BsrDI GCAATG 3 cut(s) 714, 731, 1266
BsrFI RCCGGY 1 cut(s) 936
BsrI ACTGG 4 cut(s) 1001, 1044, 1237, 1324
BssAI RCCGGY 1 cut(s) 936
BssECI CCNNGG 5 cut(s) 181, 354, 587, 735, 1134
BssMI GATC 9 cut(s) 139, 154, 247, 711, 903, 909, 927, 948, 1294
BssNI GRCGYC 2 cut(s) 731, 1224
BssT1I CCWWGG 1 cut(s) 587
Bst2UI CCWGG 2 cut(s) 299, 737
Bst4CI ACNGT 5 cut(s) 211, 689, 831, 1099, 1256
Bst6I CTCTTC 3 cut(s) 226, 659, 888
BstACI GRCGYC 2 cut(s) 731, 1224
BstAPI GCANNNNNTGC 1 cut(s) 508
BstBI TTCGAA 1 cut(s) 573
BstC8I GCNNGC 1 cut(s) 1078
BstDEI CTNAG 4 cut(s) 498, 639, 801, 1215
BstDSI CCRYGG 1 cut(s) 354
BstEII GGTNACC 1 cut(s) 188
BstENI CCTNNNNNAGG 1 cut(s) 911
BstF5I GGATG 2 cut(s) 16, 1231
BstFNI CGCG 1 cut(s) 702
BstHHI GCGC 1 cut(s) 702
BstKTI GATC 9 cut(s) 142, 157, 250, 714, 906, 912, 930, 951, 1297
BstMAI GTCTC 1 cut(s) 795
BstMBI GATC 9 cut(s) 139, 154, 247, 711, 903, 909, 927, 948, 1294
BstMCI CGRYCG 2 cut(s) 1140, 1152
BstMWI GCNNNNNNNGC 7 cut(s) 356, 508, 524, 730, 950, 1148, 1367
BstNI CCWGG 2 cut(s) 299, 737
BstNSI RCATGY 1 cut(s) 291
BstPI GGTNACC 1 cut(s) 188
BstSCI CCNGG 3 cut(s) 297, 735, 964
BstSFI CTRYAG 1 cut(s) 1173
BstSLI GKGCMC 1 cut(s) 921
BstUI CGCG 1 cut(s) 702
BstV1I GCAGC 7 cut(s) 371, 506, 514, 585, 1129, 1365, 1382
BstV2I GAAGAC 2 cut(s) 747, 1175
BstX2I RGATCY 1 cut(s) 903
BstXI CCANNNNNNTGG 1 cut(s) 200
BstYI RGATCY 1 cut(s) 903
BstZI CGGCCG 2 cut(s) 1137, 1149
Bsu36I CCTNAGG 1 cut(s) 639
BsuRI GGCC 4 cut(s) 862, 944, 1139, 1151
BtgI CCRYGG 1 cut(s) 354
BtsCI GGATG 2 cut(s) 16, 1231
BtsI GCAGTG 1 cut(s) 1182
BtsIMutI CAGTG 5 cut(s) 207, 836, 994, 1095, 1182
BveI ACCTGC 1 cut(s) 324
Cac8I GCNNGC 1 cut(s) 1078
CfoI GCGC 1 cut(s) 702
Cfr10I RCCGGY 1 cut(s) 936
Cfr13I GGNCC 2 cut(s) 942, 972
CseI GACGC 2 cut(s) 431, 739
Csp6I GTAC 1 cut(s) 616
CspAI ACCGGT 1 cut(s) 936
CviAII CATG 4 cut(s) 288, 394, 398, 1009
CviQI GTAC 1 cut(s) 616
DdeI CTNAG 4 cut(s) 498, 639, 801, 1215
DpnI GATC 9 cut(s) 141, 156, 249, 713, 905, 911, 929, 950, 1296
DpnII GATC 9 cut(s) 139, 154, 247, 711, 903, 909, 927, 948, 1294
EaeI YGGCCR 2 cut(s) 1137, 1149
EagI CGGCCG 2 cut(s) 1137, 1149
Eam1104I CTCTTC 3 cut(s) 226, 659, 888
EarI CTCTTC 3 cut(s) 226, 659, 888
EciI GGCGGA 1 cut(s) 537
EclXI CGGCCG 2 cut(s) 1137, 1149
Eco130I CCWWGG 1 cut(s) 587
Eco24I GRGCYC 1 cut(s) 221
Eco31I GGTCTC 1 cut(s) 795
Eco47I GGWCC 1 cut(s) 972
Eco52I CGGCCG 2 cut(s) 1137, 1149
Eco81I CCTNAGG 1 cut(s) 639
Eco91I GGTNACC 1 cut(s) 188
EcoNI CCTNNNNNAGG 1 cut(s) 911
EcoO65I GGTNACC 1 cut(s) 188
EcoRI GAATTC 1 cut(s) 569
EcoRII CCWGG 2 cut(s) 297, 735
EcoT14I CCWWGG 1 cut(s) 587
EcoT22I ATGCAT 2 cut(s) 289, 399
EcoT38I GRGCYC 1 cut(s) 221
ErhI CCWWGG 1 cut(s) 587
FaeI CATG 4 cut(s) 291, 397, 401, 1012
FaqI GGGAC 2 cut(s) 425, 1305
FatI CATG 4 cut(s) 287, 393, 397, 1008
FauI CCCGC 2 cut(s) 395, 1383
FbaI TGATCA 1 cut(s) 711
FblI GTMKAC 1 cut(s) 30
Fnu4HI GCNGC 9 cut(s) 360, 495, 503, 599, 1140, 1143, 1359, 1371, 1379
FokI GGATG 2 cut(s) 3, 1218
FriOI GRGCYC 1 cut(s) 221
Fsp4HI GCNGC 9 cut(s) 360, 495, 503, 599, 1140, 1143, 1359, 1371, 1379
FspBI CTAG 4 cut(s) 588, 761, 1077, 1335
GlaI GCGC 1 cut(s) 701
GluI GCNGC 9 cut(s) 360, 495, 503, 599, 1140, 1143, 1359, 1371, 1379
HaeIII GGCC 4 cut(s) 862, 944, 1139, 1151
HapII CCGG 6 cut(s) 8, 20, 512, 859, 937, 965
HgaI GACGC 2 cut(s) 431, 739
HhaI GCGC 1 cut(s) 702
Hin1I GRCGYC 2 cut(s) 731, 1224
Hin1II CATG 4 cut(s) 291, 397, 401, 1012
Hin6I GCGC 1 cut(s) 700
HinP1I GCGC 1 cut(s) 700
HincII GTYRAC 1 cut(s) 31
HindII GTYRAC 1 cut(s) 31
HinfI GANTC 4 cut(s) 575, 819, 1067, 1217
HpaII CCGG 6 cut(s) 8, 20, 512, 859, 937, 965
HphI GGTGA 6 cut(s) 54, 83, 449, 1138, 1199, 1283
Hpy166II GTNNAC 4 cut(s) 31, 919, 1190, 1274
Hpy188I TCNGA 8 cut(s) 144, 154, 168, 824, 932, 1056, 1222, 1309
Hpy188III TCNNGA 6 cut(s) 20, 443, 907, 988, 1027, 1117
Hpy8I GTNNAC 4 cut(s) 31, 919, 1190, 1274
Hpy99I CGWCG 2 cut(s) 438, 1226
HpyAV CCTTC 4 cut(s) 379, 963, 1156, 1240
HpyCH4III ACNGT 5 cut(s) 211, 689, 831, 1099, 1256
HpyCH4IV ACGT 1 cut(s) 1224
HpyCH4V TGCA 9 cut(s) 287, 319, 374, 397, 919, 1175, 1204, 1259, 1291
HpyF10VI GCNNNNNNNGC 7 cut(s) 356, 508, 524, 730, 950, 1148, 1367
HpyF3I CTNAG 4 cut(s) 498, 639, 801, 1215
HpySE526I ACGT 1 cut(s) 1224
Hsp92I GRCGYC 2 cut(s) 731, 1224
Hsp92II CATG 4 cut(s) 291, 397, 401, 1012
HspAI GCGC 1 cut(s) 700
Kpn2I TCCGGA 1 cut(s) 19
Ksp22I TGATCA 1 cut(s) 711
Kzo9I GATC 9 cut(s) 139, 154, 247, 711, 903, 909, 927, 948, 1294
LguI GCTCTTC 1 cut(s) 226
LmnI GCTCC 3 cut(s) 10, 430, 885
Lsp1109I GCAGC 7 cut(s) 371, 506, 514, 585, 1129, 1365, 1382
LweI GCATC 2 cut(s) 274, 453
MaeI CTAG 4 cut(s) 588, 761, 1077, 1335
MaeII ACGT 1 cut(s) 1224
MaeIII GTNAC 4 cut(s) 71, 188, 290, 1250
MalI GATC 9 cut(s) 141, 156, 249, 713, 905, 911, 929, 950, 1296
MboI GATC 9 cut(s) 139, 154, 247, 711, 903, 909, 927, 948, 1294
MboII GAAGA 8 cut(s) 213, 673, 676, 752, 902, 905, 1171, 1180
MflI RGATCY 1 cut(s) 903
MhlI GDGCHC 3 cut(s) 221, 921, 1097
MluCI AATT 5 cut(s) 145, 559, 569, 795, 1207
MlyI GAGTC 3 cut(s) 828, 1061, 1226
MmeI TCCRAC 3 cut(s) 802, 1131, 1245
Mph1103I ATGCAT 2 cut(s) 289, 399
MroI TCCGGA 1 cut(s) 19
MseI TTAA 1 cut(s) 1086
MslI CAYNNNNRTG 1 cut(s) 198
MspA1I CMGCKG 4 cut(s) 362, 608, 1142, 1378
MspI CCGG 6 cut(s) 8, 20, 512, 859, 937, 965
MspR9I CCNGG 3 cut(s) 299, 737, 966
MvaI CCWGG 2 cut(s) 299, 737
MvnI CGCG 1 cut(s) 702
MwoI GCNNNNNNNGC 7 cut(s) 356, 508, 524, 730, 950, 1148, 1367
NciI CCSGG 1 cut(s) 966
NdeII GATC 9 cut(s) 139, 154, 247, 711, 903, 909, 927, 948, 1294
NheI GCTAGC 1 cut(s) 1076
NlaIII CATG 4 cut(s) 291, 397, 401, 1012
NlaIV GGNNCC 1 cut(s) 12
NmeAIII GCCGAG 2 cut(s) 970, 1115
NmuCI GTSAC 1 cut(s) 71
NsiI ATGCAT 2 cut(s) 289, 399
NspI RCATGY 1 cut(s) 291
NspV TTCGAA 1 cut(s) 573
PciSI GCTCTTC 1 cut(s) 226
PfeI GAWTC 1 cut(s) 575
PflMI CCANNNNNTGG 1 cut(s) 490
PfoI TCCNGGA 1 cut(s) 964
PinAI ACCGGT 1 cut(s) 936
PkrI GCNGC 9 cut(s) 361, 496, 504, 600, 1141, 1144, 1360, 1372, 1380
PleI GAGTC 3 cut(s) 827, 1061, 1225
PpsI GAGTC 3 cut(s) 827, 1061, 1225
PshBI ATTAAT 1 cut(s) 1086
Psp6I CCWGG 2 cut(s) 297, 735
PspEI GGTNACC 1 cut(s) 188
PspGI CCWGG 2 cut(s) 297, 735
PspN4I GGNNCC 1 cut(s) 12
PspPI GGNCC 2 cut(s) 942, 972
PstI CTGCAG 1 cut(s) 1177
PsuI RGATCY 1 cut(s) 903
PvuII CAGCTG 2 cut(s) 362, 608
RsaI GTAC 1 cut(s) 617
RsaNI GTAC 1 cut(s) 616
RseI CAYNNNNRTG 1 cut(s) 198
SalI GTCGAC 1 cut(s) 29
SapI GCTCTTC 1 cut(s) 226
SaqAI TTAA 1 cut(s) 1086
SatI GCNGC 9 cut(s) 360, 495, 503, 599, 1140, 1143, 1359, 1371, 1379
Sau3AI GATC 9 cut(s) 139, 154, 247, 711, 903, 909, 927, 948, 1294
Sau96I GGNCC 2 cut(s) 942, 972
SchI GAGTC 3 cut(s) 828, 1061, 1226
ScrFI CCNGG 3 cut(s) 299, 737, 966
SduI GDGCHC 3 cut(s) 221, 921, 1097
SfaNI GCATC 2 cut(s) 274, 453
SfcI CTRYAG 1 cut(s) 1173
SfuI TTCGAA 1 cut(s) 573
SinI GGWCC 1 cut(s) 972
SmiMI CAYNNNNRTG 1 cut(s) 198
SmlI CTYRAG 1 cut(s) 1025
SmoI CTYRAG 1 cut(s) 1025
Sse9I AATT 5 cut(s) 145, 559, 569, 795, 1207
SsiI CCGC 6 cut(s) 402, 548, 1074, 1140, 1358, 1376
SspI AATATT 1 cut(s) 337
SspMI CTAG 4 cut(s) 588, 761, 1077, 1335
StyD4I CCNGG 3 cut(s) 297, 735, 964
StyI CCWWGG 1 cut(s) 587
TaaI ACNGT 5 cut(s) 211, 689, 831, 1099, 1256
TaiI ACGT 1 cut(s) 1227
TaqI TCGA 5 cut(s) 30, 573, 817, 912, 1329
TaqII GACCGA 1 cut(s) 989
TasI AATT 5 cut(s) 145, 559, 569, 795, 1207
TauI GCSGC 2 cut(s) 1142, 1361
TfiI GAWTC 1 cut(s) 575
Tru1I TTAA 1 cut(s) 1086
Tru9I TTAA 1 cut(s) 1086
TscAI CASTG 5 cut(s) 214, 836, 1001, 1102, 1182
TseFI GTSAC 1 cut(s) 71
TseI GCWGC 7 cut(s) 359, 494, 502, 598, 1142, 1370, 1378
Tsp45I GTSAC 1 cut(s) 71
TspDTI ATGAA 2 cut(s) 17, 213
TspRI CASTG 5 cut(s) 214, 836, 1001, 1102, 1182
Van91I CCANNNNNTGG 1 cut(s) 490
VneI GTGCAC 1 cut(s) 917
VpaK11BI GGWCC 1 cut(s) 972
VspI ATTAAT 1 cut(s) 1086
XagI CCTNNNNNAGG 1 cut(s) 911
XapI RAATTY 3 cut(s) 569, 795, 1207
XceI RCATGY 1 cut(s) 291
XmaJI CCTAGG 1 cut(s) 587
XmiI GTMKAC 1 cut(s) 30
XspI CTAG 4 cut(s) 588, 761, 1077, 1335
ZraI GACGTC 1 cut(s) 1225
Zsp2I ATGCAT 2 cut(s) 289, 399
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.