Rw2G052560
MYB Family

RNA polymerase II transcription regulator recruiting activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0004738
Physical Location & Seq
Forward (+)
80489662 .. 80492469
2808 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G052560.1

Sequence Viewer

Length: 1581 bp
ATGGACTACAGAGAGGGGAGTTTTTCTTTTCTTTCCACCCTCCTCTCAGGGATGAAGCCGGAGCCTCATCCGGAGAATGTCGACCTCAACACCCGTTTATTCAAACCTCCCTCACCTAATGGTGACTATAAGCCAAACACTCTCTTTGAAAACCCCTCTCACTTTGAGAACCAAGACAGCAGGGGGATTGATCTGAATTATTCAGATCAATACCATCAGAGTTCTCCTCTCCTCGGTGGTAACCATTTCGGTGGTACCACTGTTGAGGGCTCTTCATCAAAACCCTTTTGTGGGGTTGATCTCGCTACCATCAAAGGGTTCAATCAACCTTTTGATGCATGTTACAATCAGGCTGATAATCCCAACCTGCAATCAAACAATGTCAATATTTTCCCTTATGCCCCCACGGCAGCTGTTTCGTTTGCAGACAGCCAGAAGGCTGTCATGCATGGCGGGTGGGGGGACTACGATGACGCTCCTCGTCATCGTTATCAAGACCAACACCATCACCAGATGCCAGACTACCACCACCACCACCAGATGGCAGCTACGCAGCCGTTGCCGGAGGCTACACAAGCGACAAGCTGTGTCCAGCTTCCGCCCCTCGTCAATTTCCAAGAATTCGAATCAGCTACGCCTAGGGTTATGCTGCCATCAGCTGATGAGTACTACTCCCGTAACATAACCCCGAAGGAAAATGAGCTTGGCAAGAAGAAGAGGCATTACACTAAAAAAGCCAGTAAAGATGGGCCCCCAGCAATGATCATCAAGGGGCAATGGACGCCCCAGGAAGACAGACTACTGATAGAGCTAGTGGGGAGGTATGGTGATAAAAAGTGGTCTCAAATTTCTAAGGTGCTGAAAGGTCGAGTCGGAAAACAGTGTAGAGAAAGATGGCACAACCATCTCCGGCCTGACATTAGGAAAGAAATGTGGAGCGAAGAAGAGGATAAGATCCTGATCGAGGTGCACAAACAGATCGGAAACCGGTGGGCCGAGATCGCCAAGAGGCTTCCGGGGAGGACCGAGAATACTATCAAGAACCACTGGAACGCCACCATGAGGAAGCGATACCTCAAAAGAAAACTGACTACCAGTATCAATCGGAACATTAAGGACTCCTCCGCCAGCTACATTAATGAGAGCACTGTCCTGTCCAACTACATCAAGAGCGTGGTGAAATCCTCGGCCGCTGCTTCGGCCGAAAAGAAGAAGGGGAAGACTGCAGTGGTGTATGGTGAACAATCAAGTCTGCAAAATTTACCTGAGACCGACGTCTATCATCCCCAGTTTGAGAAGGGTAACGGTGCAATGGTGTATGGTGAACAATCAACAAGTTTGCACGATCTACCTATGTCCGAAGTCTATCGTCCCCAGTTCGAGCCTAGCTCCTACAATATGGAATGGGCGGCTTCGGTGGCAGCCCCCGCTGCTATGAATGCAAACAAGCAGCTGAACAACTCCCGCGTGGAGGCGACTATGGGGAGCAGCAGCTCTTATCTCTCTTCTAACAGAACCATGTATCCTGAGTTCTACGGGTACGGCAATGGGGCTGAGAAGCTTGATAAAACTCCCTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000278 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006109 GO:0006355 GO:0006357 GO:0006935 GO:0007049 GO:0007275 GO:0008150 GO:0009553 GO:0009605 GO:0009790 GO:0009791 GO:0009793 GO:0009856 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009960 GO:0009987 GO:0010154 GO:0010183 GO:0010228 GO:0010262 GO:0010439 GO:0010468 GO:0010556 GO:0010557 GO:0010565 GO:0010604 GO:0010628 GO:0010675 GO:0019216 GO:0019217 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0040011 GO:0042221 GO:0042304 GO:0042330 GO:0042592 GO:0042762 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043455 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0044706 GO:0045595 GO:0045691 GO:0045697 GO:0045723 GO:0045834 GO:0045893 GO:0045923 GO:0045935 GO:0045995 GO:0046889 GO:0046890 GO:0048229 GO:0048316 GO:0048518 GO:0048519 GO:0048522 GO:0048580 GO:0048581 GO:0048608 GO:0048731 GO:0048856 GO:0048868 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0050918 GO:0051093 GO:0051171 GO:0051173 GO:0051239 GO:0051241 GO:0051252 GO:0051254 GO:0051704 GO:0055081 GO:0055088 GO:0055089 GO:0060255 GO:0061458 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0080050 GO:0080090 GO:0097159 GO:0140110 GO:1900376 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1904095 GO:2000014 GO:2000026 GO:2000034 GO:2000112 GO:2000241 GO:2000242 GO:2000692 GO:2001141 GO:2001279 GO:2001280
KEGG Pathways
Metabolic & Signaling
ko04151 ko05166 map04151 map05166
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

526

Amino Acids

59.52

Weight (kDa)

8.53

Isoelectric Point (pI)

49.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 257 - 303 1.7e-16 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 260 - 317 4.5e-20 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 309 - 351 3.3e-16 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 312 - 355 1.4e-10 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1278
Acc36I ACCTGC 1 cut(s) 375
Acc65I GGTACC 1 cut(s) 254
AccB1I GGYRCC 1 cut(s) 254
AccB7I CCANNNNNTGG 1 cut(s) 541
AccI GTMKAC 1 cut(s) 81
AccII CGCG 1 cut(s) 1467
AccIII TCCGGA 1 cut(s) 70
AciI CCGC 7 cut(s) 453, 599, 1125, 1191, 1409, 1428, 1465
AclWI GGATC 1 cut(s) 949
AcoI YGGCCR 2 cut(s) 1188, 1200
AcsI RAATTY 3 cut(s) 620, 846, 1258
AcyI GRCGYC 2 cut(s) 782, 1275
AfaI GTAC 3 cut(s) 256, 668, 1541
AfiI CCNNNNNNNGG 8 cut(s) 233, 290, 291, 315, 541, 964, 1062, 1471
AgeI ACCGGT 1 cut(s) 987
AgsI TTSAA 3 cut(s) 103, 149, 322
AjnI CCWGG 1 cut(s) 786
AjuI GAANNNNNNNTTGG 2 cut(s) 687, 719
AloI GAACNNNNNNTCC 2 cut(s) 1507, 1539
Alw21I GWGCWC 2 cut(s) 972, 1148
Alw26I GTCTC 2 cut(s) 846, 1262
Alw44I GTGCAC 1 cut(s) 968
AlwI GGATC 1 cut(s) 949
Aor13HI TCCGGA 1 cut(s) 70
AoxI GGCC 5 cut(s) 749, 911, 993, 1188, 1200
ApaI GGGCCC 1 cut(s) 753
ApaLI GTGCAC 1 cut(s) 968
ApoI RAATTY 3 cut(s) 620, 846, 1258
AseI ATTAAT 1 cut(s) 1137
AsiGI ACCGGT 1 cut(s) 987
Asp718I GGTACC 1 cut(s) 254
AspA2I CCTAGG 1 cut(s) 638
AspS9I GGNCC 4 cut(s) 749, 750, 993, 1023
AsuC2I CCSGG 1 cut(s) 1017
AsuHPI GGTGA 7 cut(s) 105, 134, 500, 839, 1189, 1250, 1334
AsuII TTCGAA 1 cut(s) 624
AvaII GGWCC 1 cut(s) 1023
AvrII CCTAGG 1 cut(s) 638
BaeGI GKGCMC 2 cut(s) 753, 972
BaeI ACNNNNGTAYC 2 cut(s) 246, 279
BanI GGYRCC 1 cut(s) 254
BanII GRGCYC 2 cut(s) 272, 753
BarI GAAGNNNNNNTAC 4 cut(s) 707, 739, 783, 815
BbsI GAAGAC 2 cut(s) 798, 1226
Bbv12I GWGCWC 2 cut(s) 972, 1148
BccI CCATC 8 cut(s) 222, 317, 513, 535, 661, 740, 888, 912
BceAI ACGGC 3 cut(s) 423, 541, 1558
BcgI CGANNNNNNTGC 2 cut(s) 399, 433
BciT130I CCWGG 1 cut(s) 788
BciVI GTATCC 1 cut(s) 1533
BclI TGATCA 1 cut(s) 762
BcnI CCSGG 1 cut(s) 1017
BcoDI GTCTC 2 cut(s) 846, 1262
BfaI CTAG 3 cut(s) 639, 812, 1386
BfmI CTRYAG 2 cut(s) 7, 1224
BfuAI ACCTGC 1 cut(s) 375
BfuI GTATCC 1 cut(s) 1533
BglI GCCNNNNNGGC 1 cut(s) 407
BlnI CCTAGG 1 cut(s) 638
BmcAI AGTACT 1 cut(s) 668
Bme1390I CCNGG 2 cut(s) 788, 1017
Bme18I GGWCC 1 cut(s) 1023
BmgT120I GGNCC 4 cut(s) 749, 750, 993, 1023
BmiI GGNNCC 4 cut(s) 63, 256, 751, 752
BmrFI CCNGG 2 cut(s) 788, 1017
BmrI ACTGGG 2 cut(s) 1282, 1369
BmsI GCATC 2 cut(s) 325, 504
BmuI ACTGGG 2 cut(s) 1282, 1369
BoxI GACNNNNGTC 1 cut(s) 1274
BpiI GAAGAC 2 cut(s) 798, 1226
BplI GAGNNNNNCTC 6 cut(s) 211, 243, 656, 688, 1373, 1405
Bpu14I TTCGAA 1 cut(s) 624
BpuMI CCSGG 1 cut(s) 1017
BsaBI GATNNNNATC 1 cut(s) 959
BsaHI GRCGYC 2 cut(s) 782, 1275
BsaI GGTCTC 2 cut(s) 846, 1262
BsaJI CCNNGG 6 cut(s) 232, 405, 638, 786, 1016, 1185
BsaWI WCCGGW 2 cut(s) 70, 987
BsaXI ACNNNNNCTCC 2 cut(s) 811, 841
Bsc4I CCNNNNNNNGG 8 cut(s) 233, 290, 291, 315, 541, 964, 1062, 1471
Bse118I RCCGGY 1 cut(s) 987
Bse1I ACTGG 5 cut(s) 738, 1052, 1095, 1288, 1375
Bse3DI GCAATG 4 cut(s) 765, 782, 1317, 1552
Bse8I GATNNNNATC 1 cut(s) 959
BseAI TCCGGA 1 cut(s) 70
BseBI CCWGG 1 cut(s) 788
BseDI CCNNGG 6 cut(s) 232, 405, 638, 786, 1016, 1185
BseGI GGATG 3 cut(s) 57, 67, 1282
BseJI GATNNNNATC 1 cut(s) 959
BseLI CCNNNNNNNGG 8 cut(s) 233, 290, 291, 315, 541, 964, 1062, 1471
BseMI GCAATG 4 cut(s) 765, 782, 1317, 1552
BseMII CTCAG 4 cut(s) 60, 1257, 1518, 1545
BseNI ACTGG 5 cut(s) 738, 1052, 1095, 1288, 1375
BseRI GAGGAG 5 cut(s) 32, 216, 221, 468, 1111
BseSI GKGCMC 2 cut(s) 753, 972
BseX3I CGGCCG 2 cut(s) 1188, 1200
BseYI CCCAGC 1 cut(s) 754
Bsh1236I CGCG 1 cut(s) 1467
Bsh1285I CGRYCG 2 cut(s) 1191, 1203
BshFI GGCC 5 cut(s) 751, 913, 995, 1190, 1202
BshNI GGYRCC 1 cut(s) 254
BshTI ACCGGT 1 cut(s) 987
BsiEI CGRYCG 2 cut(s) 1191, 1203
BsiHKAI GWGCWC 2 cut(s) 972, 1148
BsiSI CCGG 6 cut(s) 59, 71, 563, 910, 988, 1016
BslFI GGGAC 2 cut(s) 476, 1356
BslI CCNNNNNNNGG 8 cut(s) 233, 290, 291, 315, 541, 964, 1062, 1471
BsmAI GTCTC 2 cut(s) 846, 1262
BsmFI GGGAC 2 cut(s) 476, 1356
BsmI GAATGC 1 cut(s) 1444
BsnI GGCC 5 cut(s) 751, 913, 995, 1190, 1202
Bso31I GGTCTC 2 cut(s) 846, 1262
Bsp119I TTCGAA 1 cut(s) 624
Bsp120I GGGCCC 1 cut(s) 749
Bsp1286I GDGCHC 4 cut(s) 272, 753, 972, 1148
Bsp13I TCCGGA 1 cut(s) 70
Bsp143I GATC 9 cut(s) 190, 205, 298, 762, 954, 960, 978, 999, 1345
BspACI CCGC 7 cut(s) 453, 599, 1125, 1191, 1409, 1428, 1465
BspANI GGCC 5 cut(s) 751, 913, 995, 1190, 1202
BspCNI CTCAG 4 cut(s) 59, 1258, 1519, 1546
BspEI TCCGGA 1 cut(s) 70
BspFNI CGCG 1 cut(s) 1467
BspLI GGNNCC 4 cut(s) 63, 256, 751, 752
BspMAI CTGCAG 1 cut(s) 1228
BspMI ACCTGC 1 cut(s) 375
BspPI GGATC 1 cut(s) 949
BspQI GCTCTTC 1 cut(s) 277
BspT104I TTCGAA 1 cut(s) 624
BspT107I GGYRCC 1 cut(s) 254
BspTNI GGTCTC 2 cut(s) 846, 1262
BsrDI GCAATG 4 cut(s) 765, 782, 1317, 1552
BsrFI RCCGGY 1 cut(s) 987
BsrI ACTGG 5 cut(s) 738, 1052, 1095, 1288, 1375
BssAI RCCGGY 1 cut(s) 987
BssECI CCNNGG 6 cut(s) 232, 405, 638, 786, 1016, 1185
BssMI GATC 9 cut(s) 190, 205, 298, 762, 954, 960, 978, 999, 1345
BssNI GRCGYC 2 cut(s) 782, 1275
BssT1I CCWWGG 1 cut(s) 638
Bst2UI CCWGG 1 cut(s) 788
Bst4CI ACNGT 4 cut(s) 262, 882, 1150, 1307
Bst6I CTCTTC 4 cut(s) 277, 710, 939, 1510
BstACI GRCGYC 2 cut(s) 782, 1275
BstAPI GCANNNNNTGC 1 cut(s) 559
BstBI TTCGAA 1 cut(s) 624
BstC8I GCNNGC 1 cut(s) 1129
BstDEI CTNAG 5 cut(s) 46, 852, 1266, 1527, 1554
BstDSI CCRYGG 1 cut(s) 405
BstEII GGTNACC 1 cut(s) 239
BstENI CCTNNNNNAGG 1 cut(s) 962
BstF5I GGATG 3 cut(s) 57, 67, 1282
BstFNI CGCG 1 cut(s) 1467
BstKTI GATC 9 cut(s) 193, 208, 301, 765, 957, 963, 981, 1002, 1348
BstMAI GTCTC 2 cut(s) 846, 1262
BstMBI GATC 9 cut(s) 190, 205, 298, 762, 954, 960, 978, 999, 1345
BstMCI CGRYCG 2 cut(s) 1191, 1203
BstNI CCWGG 1 cut(s) 788
BstNSI RCATGY 1 cut(s) 342
BstPAI GACNNNNGTC 1 cut(s) 1274
BstPI GGTNACC 1 cut(s) 239
BstSCI CCNGG 2 cut(s) 786, 1015
BstSFI CTRYAG 2 cut(s) 7, 1224
BstSLI GKGCMC 2 cut(s) 753, 972
BstUI CGCG 1 cut(s) 1467
BstV2I GAAGAC 2 cut(s) 798, 1226
BstX2I RGATCY 1 cut(s) 954
BstXI CCANNNNNNTGG 1 cut(s) 251
BstYI RGATCY 1 cut(s) 954
BstZI CGGCCG 2 cut(s) 1188, 1200
BsuI GTATCC 1 cut(s) 1533
BsuRI GGCC 5 cut(s) 751, 913, 995, 1190, 1202
BtgI CCRYGG 1 cut(s) 405
BtsCI GGATG 3 cut(s) 57, 67, 1282
BtsI GCAGTG 1 cut(s) 1233
BtsIMutI CAGTG 5 cut(s) 258, 887, 1045, 1146, 1233
BveI ACCTGC 1 cut(s) 375
Cac8I GCNNGC 1 cut(s) 1129
Cfr10I RCCGGY 1 cut(s) 987
Cfr13I GGNCC 4 cut(s) 749, 750, 993, 1023
CseI GACGC 2 cut(s) 482, 790
Csp6I GTAC 3 cut(s) 255, 667, 1540
CspAI ACCGGT 1 cut(s) 987
CviAII CATG 5 cut(s) 339, 445, 449, 1060, 1519
CviQI GTAC 3 cut(s) 255, 667, 1540
DdeI CTNAG 5 cut(s) 46, 852, 1266, 1527, 1554
DpnI GATC 9 cut(s) 192, 207, 300, 764, 956, 962, 980, 1001, 1347
DpnII GATC 9 cut(s) 190, 205, 298, 762, 954, 960, 978, 999, 1345
EaeI YGGCCR 2 cut(s) 1188, 1200
EagI CGGCCG 2 cut(s) 1188, 1200
Eam1104I CTCTTC 4 cut(s) 277, 710, 939, 1510
EarI CTCTTC 4 cut(s) 277, 710, 939, 1510
EciI GGCGGA 2 cut(s) 588, 1114
EclXI CGGCCG 2 cut(s) 1188, 1200
Eco130I CCWWGG 1 cut(s) 638
Eco24I GRGCYC 2 cut(s) 272, 753
Eco31I GGTCTC 2 cut(s) 846, 1262
Eco47I GGWCC 1 cut(s) 1023
Eco52I CGGCCG 2 cut(s) 1188, 1200
Eco91I GGTNACC 1 cut(s) 239
EcoNI CCTNNNNNAGG 1 cut(s) 962
EcoO109I RGGNCCY 1 cut(s) 750
EcoO65I GGTNACC 1 cut(s) 239
EcoRI GAATTC 1 cut(s) 620
EcoRII CCWGG 1 cut(s) 786
EcoT14I CCWWGG 1 cut(s) 638
EcoT22I ATGCAT 2 cut(s) 340, 450
EcoT38I GRGCYC 2 cut(s) 272, 753
ErhI CCWWGG 1 cut(s) 638
FaeI CATG 5 cut(s) 342, 448, 452, 1063, 1522
FaqI GGGAC 2 cut(s) 476, 1356
FatI CATG 5 cut(s) 338, 444, 448, 1059, 1518
FauI CCCGC 3 cut(s) 446, 1435, 1472
FbaI TGATCA 1 cut(s) 762
FblI GTMKAC 1 cut(s) 81
FokI GGATG 3 cut(s) 54, 64, 1269
FriOI GRGCYC 2 cut(s) 272, 753
FspBI CTAG 3 cut(s) 639, 812, 1386
GsaI CCCAGC 1 cut(s) 758
HaeIII GGCC 5 cut(s) 751, 913, 995, 1190, 1202
HapII CCGG 6 cut(s) 59, 71, 563, 910, 988, 1016
HgaI GACGC 2 cut(s) 482, 790
Hin1I GRCGYC 2 cut(s) 782, 1275
Hin1II CATG 5 cut(s) 342, 448, 452, 1063, 1522
HincII GTYRAC 1 cut(s) 82
HindII GTYRAC 1 cut(s) 82
HindIII AAGCTT 1 cut(s) 1559
HinfI GANTC 3 cut(s) 626, 870, 1118
HpaII CCGG 6 cut(s) 59, 71, 563, 910, 988, 1016
HphI GGTGA 7 cut(s) 105, 134, 500, 839, 1189, 1250, 1334
Hpy166II GTNNAC 4 cut(s) 82, 970, 1241, 1325
Hpy188I TCNGA 7 cut(s) 195, 205, 219, 875, 983, 1107, 1360
Hpy188III TCNNGA 6 cut(s) 71, 494, 958, 1039, 1168, 1526
Hpy8I GTNNAC 4 cut(s) 82, 970, 1241, 1325
Hpy99I CGWCG 1 cut(s) 1277
HpyAV CCTTC 4 cut(s) 430, 685, 1207, 1291
HpyCH4III ACNGT 4 cut(s) 262, 882, 1150, 1307
HpyCH4IV ACGT 1 cut(s) 1275
HpyF3I CTNAG 5 cut(s) 46, 852, 1266, 1527, 1554
HpySE526I ACGT 1 cut(s) 1275
Hsp92I GRCGYC 2 cut(s) 782, 1275
Hsp92II CATG 5 cut(s) 342, 448, 452, 1063, 1522
Kpn2I TCCGGA 1 cut(s) 70
KpnI GGTACC 1 cut(s) 258
Ksp22I TGATCA 1 cut(s) 762
Kzo9I GATC 9 cut(s) 190, 205, 298, 762, 954, 960, 978, 999, 1345
LguI GCTCTTC 1 cut(s) 277
LmnI GCTCC 5 cut(s) 61, 481, 936, 1394, 1485
LweI GCATC 2 cut(s) 325, 504
MaeI CTAG 3 cut(s) 639, 812, 1386
MaeII ACGT 1 cut(s) 1275
MaeIII GTNAC 5 cut(s) 122, 239, 341, 677, 1301
MalI GATC 9 cut(s) 192, 207, 300, 764, 956, 962, 980, 1001, 1347
MboI GATC 9 cut(s) 190, 205, 298, 762, 954, 960, 978, 999, 1345
MboII GAAGA 9 cut(s) 264, 724, 727, 803, 953, 956, 1222, 1231, 1497
MflI RGATCY 1 cut(s) 954
MhlI GDGCHC 4 cut(s) 272, 753, 972, 1148
MluCI AATT 5 cut(s) 196, 610, 620, 846, 1258
MlyI GAGTC 2 cut(s) 879, 1112
MmeI TCCRAC 2 cut(s) 853, 1182
Mph1103I ATGCAT 2 cut(s) 340, 450
MroI TCCGGA 1 cut(s) 70
MseI TTAA 3 cut(s) 1113, 1137, 1579
MslI CAYNNNNRTG 1 cut(s) 249
MspA1I CMGCKG 5 cut(s) 413, 659, 1193, 1430, 1453
MspI CCGG 6 cut(s) 59, 71, 563, 910, 988, 1016
MspR9I CCNGG 2 cut(s) 788, 1017
Mva1269I GAATGC 1 cut(s) 1444
MvaI CCWGG 1 cut(s) 788
MvnI CGCG 1 cut(s) 1467
NciI CCSGG 1 cut(s) 1017
NdeII GATC 9 cut(s) 190, 205, 298, 762, 954, 960, 978, 999, 1345
NlaIII CATG 5 cut(s) 342, 448, 452, 1063, 1522
NlaIV GGNNCC 4 cut(s) 63, 256, 751, 752
NmeAIII GCCGAG 2 cut(s) 1021, 1166
NmuCI GTSAC 1 cut(s) 122
NsiI ATGCAT 2 cut(s) 340, 450
NspI RCATGY 1 cut(s) 342
NspV TTCGAA 1 cut(s) 624
PciSI GCTCTTC 1 cut(s) 277
PctI GAATGC 1 cut(s) 1444
PfeI GAWTC 1 cut(s) 626
PflMI CCANNNNNTGG 1 cut(s) 541
PinAI ACCGGT 1 cut(s) 987
PleI GAGTC 2 cut(s) 878, 1112
PpsI GAGTC 2 cut(s) 878, 1112
PshAI GACNNNNGTC 1 cut(s) 1274
PshBI ATTAAT 1 cut(s) 1137
Psp6I CCWGG 1 cut(s) 786
PspEI GGTNACC 1 cut(s) 239
PspFI CCCAGC 1 cut(s) 754
PspGI CCWGG 1 cut(s) 786
PspN4I GGNNCC 4 cut(s) 63, 256, 751, 752
PspOMI GGGCCC 1 cut(s) 749
PspPI GGNCC 4 cut(s) 749, 750, 993, 1023
PsrI GAACNNNNNNTAC 2 cut(s) 1514, 1546
PstI CTGCAG 1 cut(s) 1228
PsuI RGATCY 1 cut(s) 954
PvuII CAGCTG 3 cut(s) 413, 659, 1453
RsaI GTAC 3 cut(s) 256, 668, 1541
RsaNI GTAC 3 cut(s) 255, 667, 1540
RseI CAYNNNNRTG 1 cut(s) 249
SalI GTCGAC 1 cut(s) 80
SapI GCTCTTC 1 cut(s) 277
SaqAI TTAA 3 cut(s) 1113, 1137, 1579
Sau3AI GATC 9 cut(s) 190, 205, 298, 762, 954, 960, 978, 999, 1345
Sau96I GGNCC 4 cut(s) 749, 750, 993, 1023
ScaI AGTACT 1 cut(s) 668
SchI GAGTC 2 cut(s) 879, 1112
ScrFI CCNGG 2 cut(s) 788, 1017
SduI GDGCHC 4 cut(s) 272, 753, 972, 1148
SfaNI GCATC 2 cut(s) 325, 504
SfcI CTRYAG 2 cut(s) 7, 1224
SfuI TTCGAA 1 cut(s) 624
SinI GGWCC 1 cut(s) 1023
SmiMI CAYNNNNRTG 1 cut(s) 249
Sse9I AATT 5 cut(s) 196, 610, 620, 846, 1258
SsiI CCGC 7 cut(s) 453, 599, 1125, 1191, 1409, 1428, 1465
SspI AATATT 1 cut(s) 388
SspMI CTAG 3 cut(s) 639, 812, 1386
StyD4I CCNGG 2 cut(s) 786, 1015
StyI CCWWGG 1 cut(s) 638
TaaI ACNGT 4 cut(s) 262, 882, 1150, 1307
TaiI ACGT 1 cut(s) 1278
TaqI TCGA 5 cut(s) 81, 624, 868, 963, 1380
TaqII GACCGA 2 cut(s) 1040, 1286
TasI AATT 5 cut(s) 196, 610, 620, 846, 1258
TatI WGTACW 1 cut(s) 666
TauI GCSGC 2 cut(s) 1193, 1412
TfiI GAWTC 1 cut(s) 626
Tru1I TTAA 3 cut(s) 1113, 1137, 1579
Tru9I TTAA 3 cut(s) 1113, 1137, 1579
TscAI CASTG 5 cut(s) 265, 887, 1052, 1153, 1233
TseFI GTSAC 1 cut(s) 122
Tsp45I GTSAC 1 cut(s) 122
TspDTI ATGAA 3 cut(s) 68, 264, 1451
TspRI CASTG 5 cut(s) 265, 887, 1052, 1153, 1233
Van91I CCANNNNNTGG 1 cut(s) 541
VneI GTGCAC 1 cut(s) 968
VpaK11BI GGWCC 1 cut(s) 1023
VspI ATTAAT 1 cut(s) 1137
XagI CCTNNNNNAGG 1 cut(s) 962
XapI RAATTY 3 cut(s) 620, 846, 1258
XceI RCATGY 1 cut(s) 342
XmaJI CCTAGG 1 cut(s) 638
XmiI GTMKAC 1 cut(s) 81
XspI CTAG 3 cut(s) 639, 812, 1386
ZraI GACGTC 1 cut(s) 1276
ZrmI AGTACT 1 cut(s) 668
Zsp2I ATGCAT 2 cut(s) 340, 450
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.