Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0008903

Physical Location & Seq

Genomic Coordinates Forward (+)

15806872 .. 15832623

Gene Structure 25752 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022956

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGTGGTGCCGGAAAGGTGAACGTCGCGTTCTGTTACTATGCGGGGACTACATGGAAGACCACAAGTCAATGGTCCCTTTTCAAGCACTGCAGGCCTATGGAGTCACTGTCGACGCCGTCTGTCCCGACAAGAAAGCCGGTGACTACTGCCGCACCGCCATTCATCAACACACTTCGGCTCATCAGACTCATCCGGAATCAAGTGGTCACAACTTTGCTCTGAATGCAACGTTTGATGACATTGAATATAGCAACTATGATGGAATAATAATCCCCGGAAGACGATCTCCTGAGTATCTTGCCATGGATGCATCGGTTTTAGAATTGGTCAACAAGCTTGCCGCGTCCAGGAAGATAATTGCTGCTATATGCCGTGGGGTATTGGTCTTAGCAGCTGCAGGCTTGGTTAAGGGGCGCAACTGCACAGGGTTCCCACCTATGAGACCTGTCCTCCTTGCTGGGGGTGATCATTGGGTGGAACCTGATACCATGGGGACGTGTATCGCAGATGGTAATATAATTACTGGGTTCATCAGGCTTTTTGTCAAGGCATTGGGAGGCCACATAATAGTTCAGAGAGAAGAGTCCTGTTTCTCTGTGGACAATTCACAAAGCAAAAGCAATTGGATCTCGGCGCCAAAATCGAGGCTGCCGAAAGAGCTGAAAAGAGATGAATCGAGGGAAAGCTCTGGAAGGAAATGTACTGCACATCTAGCGGTCAGAGTCTATGTAGTTTTGTCAGGAGCAAAATGGGAGGAACCTGATCCAATAGATAGTTCCGTTACAGATGGAAATCTGGTAACTGGAGCTGTTTGGCTGGGCCATCCCGACTTTATTTCTCCGTTGATGGTGTTGCTTGCTGTTCAACCTAATCAAGGAAGAGAGCTTCTTGGAGCCCTGCCTGGATCAACCAGCACCGACCAGAGCCGCCTCAGACCCCCTAAAAAAAAAATCGCCGCCCAAGTCGTCCAAAGTCCAATGCAGAGAACAGCTCACCGCCTAGATCGTCCCACTGGCACTGCACCAACGCTGAAGATCACTCCATCACCTCTGCAGCCCAGCACCCTCAATCACGACAATCTTCAACCGCGGCAATCGGAGCACCGTAGAATGTCTCCTCTTTTACGCCTACGCCGTCCCTCCCTTATCTGGTCTGGGCAATTAAACATCGTCCCTCCCTTACAGTCGTGCAGCCCAGAAGCCGGTGCTCGTGCAGTCGGCGACGAGTTTGTGCAGCCCAGAAGACGGCGGCGAGTTCGTGCAGACGGCGGCGAGTTTGTGCAGCCGGCGCCATCGATCGTACAGCCGGCGGCGAGTTCGTGCAGCGAGCTCGGAGTTCCTTTACGTCACCTCCGTGCAGCTAGGTTGGAGTTCCGGTTCTTGCAGCGTGCTCGGGGTACGCACCATCCATTGCCGGCGGCGAGTTCGTCCAGGTACAGGTACTCCCTGCTGCACTGGATTACTGTCTCAAAATTGAAAACCCTAGCAGATTCGCAAACTCCCATCAGCCTCTCATTTTCAGTTTTTCACTTTGCACTTTTGCAGTCTTTGCTAGCCTCCTCCGGACCTCATCTCTCTCGAATCACGACGAAGACGACTGAAGCTGACTACGCCGACGATGCTGACGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006081 GO:0006082 GO:0006089 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009438 GO:0009987 GO:0016053 GO:0016829 GO:0016835 GO:0016836 GO:0019172 GO:0019249 GO:0019752 GO:0032787 GO:0042180 GO:0042182 GO:0043436 GO:0044237 GO:0044248 GO:0044249 GO:0044281 GO:0044282 GO:0044283 GO:0046185 GO:0046394 GO:0051596 GO:0061727 GO:0071704 GO:0072330 GO:1901575 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00620 ko01120 map00620 map01120

Pfam Domains

Protein Families

DJ-1_PfpI

Protein Analysis

544

Amino Acids

59.68

Weight (kDa)

9.39

Isoelectric Point (pI)

58.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DJ-1_PfpI	PF01965	8 - 176	1.7e-33	DJ-1/PfpI family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008903)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr2g0117571
rosa_laevigata	RLG00000001220 RLG00000001333 RLG00000001877 RLG00000008081 RLG00000011424 RLG00000013237 RLG00000015905 RLG00000022956
rosa_multiflora	Rmu_sc0000735.1_g000011 Rmu_sc0001408.1_g000014 Rmu_sc0005263.1_g000012 Rmu_sc0032693.1_g000001 Rmu_ssc0000330.1_g000006
rosa_roxburghii	Rroxscaffold_4G00295960 Rroxscaffold_6G00410330
rosa_samantha	Rh1AG061500 Rh2BG435400 Rh5DG024800 Rh6CG096100 Rh6CG237800 Rh6DG498300 Rh7BG199200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	6, 634, 1288
AccI	GTMKAC	1 cut(s)	111
AccII	CGCG	3 cut(s)	27, 344, 1090
AccIII	TCCGGA	2 cut(s)	193, 1562
AclI	AACGTT	1 cut(s)	230
AclWI	GGATC	3 cut(s)	635, 758, 913
AcuI	CTGAAG	2 cut(s)	1052, 1620
AcyI	GRCGYC	3 cut(s)	114, 635, 1289
AfaI	GTAC	5 cut(s)	703, 1302, 1399, 1436, 1442
AfiI	CCNNNNNNNGG	7 cut(s)	348, 460, 875, 1149, 1202, 1245, 1437
AflIII	ACRYGT	1 cut(s)	497
AgsI	TTSAA	5 cut(s)	83, 245, 866, 1085, 1477
AhdI	GACNNNNNGTC	1 cut(s)	64
AjiI	CACGTC	1 cut(s)	498
AjnI	CCWGG	3 cut(s)	347, 901, 1430
AjuI	GAANNNNNNNTTGG	2 cut(s)	760, 792
AleI	CACNNNNGTG	1 cut(s)	1353
AloI	GAACNNNNNNTCC	2 cut(s)	1361, 1393
Alw21I	GWGCWC	4 cut(s)	1104, 1210, 1332, 1393
Alw26I	GTCTC	3 cut(s)	436, 1119, 1471
AlwI	GGATC	3 cut(s)	635, 758, 913
Ama87I	CYCGRG	1 cut(s)	1392
Aor13HI	TCCGGA	2 cut(s)	193, 1562
AoxI	GGCC	3 cut(s)	93, 559, 820
AspLEI	GCGC	3 cut(s)	417, 637, 1291
AspS9I	GGNCC	3 cut(s)	73, 820, 1565
AsuC2I	CCSGG	1 cut(s)	276
AsuHPI	GGTGA	6 cut(s)	29, 152, 476, 986, 1038, 1340
AsuNHI	GCTAGC	1 cut(s)	1552
AvaI	CYCGRG	1 cut(s)	1392
AvaII	GGWCC	2 cut(s)	73, 1565
BanI	GGYRCC	3 cut(s)	6, 634, 1288
BanII	GRGCYC	2 cut(s)	898, 1332
BarI	GAAGNNNNNNTAC	2 cut(s)	685, 717
BauI	CACGAG	1 cut(s)	1209
BbsI	GAAGAC	4 cut(s)	63, 286, 1249, 1598
Bbv12I	GWGCWC	4 cut(s)	1104, 1210, 1332, 1393
BccI	CCATC	9 cut(s)	254, 503, 782, 831, 841, 1051, 1300, 1413, 1511
BceAI	ACGGC	5 cut(s)	101, 357, 1119, 1262, 1282
BcgI	CGANNNNNNTGC	4 cut(s)	1312, 1346, 1373, 1407
BciT130I	CCWGG	3 cut(s)	349, 903, 1432
BclI	TGATCA	1 cut(s)	466
BcnI	CCSGG	1 cut(s)	276
BcoDI	GTCTC	3 cut(s)	436, 1119, 1471
BfaI	CTAG	5 cut(s)	713, 1001, 1362, 1484, 1553
BfmI	CTRYAG	3 cut(s)	89, 396, 1052
BfoI	RGCGCY	2 cut(s)	638, 1292
Bme1390I	CCNGG	4 cut(s)	276, 349, 903, 1432
Bme18I	GGWCC	2 cut(s)	73, 1565
BmeRI	GACNNNNNGTC	1 cut(s)	64
BmeT110I	CYCGRG	1 cut(s)	1392
BmgBI	CACGTC	1 cut(s)	498
BmgT120I	GGNCC	3 cut(s)	73, 820, 1565
BmiI	GGNNCC	8 cut(s)	8, 75, 431, 480, 636, 759, 895, 1290
BmrFI	CCNGG	4 cut(s)	276, 349, 903, 1432
BmrI	ACTGGG	1 cut(s)	534
BmsI	GCATC	3 cut(s)	298, 320, 1609
BmtI	GCTAGC	1 cut(s)	1556
BmuI	ACTGGG	1 cut(s)	534
BpiI	GAAGAC	4 cut(s)	63, 286, 1249, 1598
BplI	GAGNNNNNCTC	2 cut(s)	976, 1008
BpmI	CTGGAG	1 cut(s)	825
BpuMI	CCSGG	1 cut(s)	276
Bsa29I	ATCGAT	1 cut(s)	1295
BsaBI	GATNNNNATC	1 cut(s)	792
BsaHI	GRCGYC	3 cut(s)	114, 635, 1289
BsaI	GGTCTC	1 cut(s)	436
BsaJI	CCNNGG	5 cut(s)	274, 303, 373, 489, 1088
BsaWI	WCCGGW	3 cut(s)	193, 1374, 1562
Bsc4I	CCNNNNNNNGG	7 cut(s)	348, 460, 875, 1149, 1202, 1245, 1437
Bse118I	RCCGGY	5 cut(s)	137, 1202, 1285, 1306, 1414
Bse1I	ACTGG	4 cut(s)	529, 808, 1018, 1460
Bse3DI	GCAATG	1 cut(s)	1409
Bse8I	GATNNNNATC	1 cut(s)	792
BseAI	TCCGGA	2 cut(s)	193, 1562
BseBI	CCWGG	3 cut(s)	349, 903, 1432
BseCI	ATCGAT	1 cut(s)	1295
BseDI	CCNNGG	5 cut(s)	274, 303, 373, 489, 1088
BseGI	GGATG	4 cut(s)	190, 313, 823, 1405
BseJI	GATNNNNATC	1 cut(s)	792
BseLI	CCNNNNNNNGG	7 cut(s)	348, 460, 875, 1149, 1202, 1245, 1437
BseMI	GCAATG	1 cut(s)	1409
BseMII	CTCAG	2 cut(s)	282, 946
BseNI	ACTGG	4 cut(s)	529, 808, 1018, 1460
BseRI	GAGGAG	2 cut(s)	1107, 1549
BseYI	CCCAGC	3 cut(s)	458, 817, 1058
Bsh1236I	CGCG	3 cut(s)	27, 344, 1090
Bsh1285I	CGRYCG	1 cut(s)	1299
BshFI	GGCC	3 cut(s)	95, 561, 822
BshNI	GGYRCC	3 cut(s)	6, 634, 1288
BshVI	ATCGAT	1 cut(s)	1295
BsiEI	CGRYCG	1 cut(s)	1299
BsiHKAI	GWGCWC	4 cut(s)	1104, 1210, 1332, 1393
BsiHKCI	CYCGRG	1 cut(s)	1392
BslFI	GGGAC	7 cut(s)	59, 59, 108, 508, 993, 1122, 1157
BslI	CCNNNNNNNGG	7 cut(s)	348, 460, 875, 1149, 1202, 1245, 1437
BsmAI	GTCTC	3 cut(s)	436, 1119, 1471
BsmFI	GGGAC	7 cut(s)	59, 59, 108, 508, 993, 1122, 1157
BsmI	GAATGC	1 cut(s)	229
BsnI	GGCC	3 cut(s)	95, 561, 822
Bso31I	GGTCTC	1 cut(s)	436
BsoBI	CYCGRG	1 cut(s)	1392
Bsp1286I	GDGCHC	5 cut(s)	898, 1104, 1210, 1332, 1393
Bsp13I	TCCGGA	2 cut(s)	193, 1562
Bsp143I	GATC	8 cut(s)	284, 466, 627, 763, 905, 1003, 1035, 1296
Bsp19I	CCATGG	2 cut(s)	303, 489
BspANI	GGCC	3 cut(s)	95, 561, 822
BspCNI	CTCAG	2 cut(s)	283, 945
BspDI	ATCGAT	1 cut(s)	1295
BspEI	TCCGGA	2 cut(s)	193, 1562
BspFNI	CGCG	3 cut(s)	27, 344, 1090
BspLI	GGNNCC	8 cut(s)	8, 75, 431, 480, 636, 759, 895, 1290
BspMAI	CTGCAG	3 cut(s)	93, 400, 1056
BspOI	GCTAGC	1 cut(s)	1556
BspPI	GGATC	3 cut(s)	635, 758, 913
BspT107I	GGYRCC	3 cut(s)	6, 634, 1288
BspTNI	GGTCTC	1 cut(s)	436
BsrDI	GCAATG	1 cut(s)	1409
BsrFI	RCCGGY	5 cut(s)	137, 1202, 1285, 1306, 1414
BsrI	ACTGG	4 cut(s)	529, 808, 1018, 1460
BssAI	RCCGGY	5 cut(s)	137, 1202, 1285, 1306, 1414
BssECI	CCNNGG	5 cut(s)	274, 303, 373, 489, 1088
BssMI	GATC	8 cut(s)	284, 466, 627, 763, 905, 1003, 1035, 1296
BssNI	GRCGYC	3 cut(s)	114, 635, 1289
BssSI	CACGAG	1 cut(s)	1209
BssT1I	CCWWGG	2 cut(s)	303, 489
Bst2BI	CACGAG	1 cut(s)	1209
Bst2UI	CCWGG	3 cut(s)	349, 903, 1432
Bst4CI	ACNGT	4 cut(s)	109, 1106, 1185, 1465
Bst6I	CTCTTC	2 cut(s)	576, 874
BstACI	GRCGYC	3 cut(s)	114, 635, 1289
BstAPI	GCANNNNNTGC	1 cut(s)	1549
BstDEI	CTNAG	3 cut(s)	291, 388, 932
BstDSI	CCRYGG	4 cut(s)	303, 373, 489, 1088
BstENI	CCTNNNNNAGG	1 cut(s)	873
BstF5I	GGATG	4 cut(s)	190, 313, 823, 1405
BstFNI	CGCG	3 cut(s)	27, 344, 1090
BstH2I	RGCGCY	2 cut(s)	638, 1292
BstHHI	GCGC	3 cut(s)	417, 637, 1291
BstKTI	GATC	8 cut(s)	287, 469, 630, 766, 908, 1006, 1038, 1299
BstMAI	GTCTC	3 cut(s)	436, 1119, 1471
BstMBI	GATC	8 cut(s)	284, 466, 627, 763, 905, 1003, 1035, 1296
BstMCI	CGRYCG	1 cut(s)	1299
BstNI	CCWGG	3 cut(s)	349, 903, 1432
BstSCI	CCNGG	4 cut(s)	274, 347, 901, 1430
BstSFI	CTRYAG	3 cut(s)	89, 396, 1052
BstUI	CGCG	3 cut(s)	27, 344, 1090
BstV2I	GAAGAC	4 cut(s)	63, 286, 1249, 1598
BstX2I	RGATCY	1 cut(s)	627
BstYI	RGATCY	1 cut(s)	627
Bsu15I	ATCGAT	1 cut(s)	1295
BsuRI	GGCC	3 cut(s)	95, 561, 822
BsuTUI	ATCGAT	1 cut(s)	1295
BtgI	CCRYGG	4 cut(s)	303, 373, 489, 1088
BtrI	CACGTC	1 cut(s)	498
BtsCI	GGATG	4 cut(s)	190, 313, 823, 1405
BtsI	GCAGTG	2 cut(s)	86, 1017
BtsIMutI	CAGTG	5 cut(s)	86, 105, 1011, 1017, 1453
CfoI	GCGC	3 cut(s)	417, 637, 1291
Cfr10I	RCCGGY	5 cut(s)	137, 1202, 1285, 1306, 1414
Cfr13I	GGNCC	3 cut(s)	73, 820, 1565
Cfr42I	CCGCGG	1 cut(s)	1091
ClaI	ATCGAT	1 cut(s)	1295
CseI	GACGC	2 cut(s)	122, 333
Csp6I	GTAC	5 cut(s)	702, 1301, 1398, 1435, 1441
CviAII	CATG	3 cut(s)	52, 304, 490
CviQI	GTAC	5 cut(s)	702, 1301, 1398, 1435, 1441
DdeI	CTNAG	3 cut(s)	291, 388, 932
DinI	GGCGCC	2 cut(s)	636, 1290
DpnI	GATC	8 cut(s)	286, 468, 629, 765, 907, 1005, 1037, 1298
DpnII	GATC	8 cut(s)	284, 466, 627, 763, 905, 1003, 1035, 1296
DriI	GACNNNNNGTC	1 cut(s)	64
Eam1104I	CTCTTC	2 cut(s)	576, 874
Eam1105I	GACNNNNNGTC	1 cut(s)	64
EarI	CTCTTC	2 cut(s)	576, 874
Ecl136II	GAGCTC	1 cut(s)	1330
Eco130I	CCWWGG	2 cut(s)	303, 489
Eco147I	AGGCCT	1 cut(s)	95
Eco24I	GRGCYC	2 cut(s)	898, 1332
Eco31I	GGTCTC	1 cut(s)	436
Eco47I	GGWCC	2 cut(s)	73, 1565
Eco53kI	GAGCTC	1 cut(s)	1330
Eco57I	CTGAAG	2 cut(s)	1052, 1620
Eco88I	CYCGRG	1 cut(s)	1392
EcoICRI	GAGCTC	1 cut(s)	1330
EcoNI	CCTNNNNNAGG	1 cut(s)	873
EcoRII	CCWGG	3 cut(s)	347, 901, 1430
EcoT14I	CCWWGG	2 cut(s)	303, 489
EcoT22I	ATGCAT	1 cut(s)	313
EcoT38I	GRGCYC	2 cut(s)	898, 1332
EgeI	GGCGCC	2 cut(s)	636, 1290
EheI	GGCGCC	2 cut(s)	636, 1290
ErhI	CCWWGG	2 cut(s)	303, 489
FaeI	CATG	3 cut(s)	55, 307, 493
FaqI	GGGAC	7 cut(s)	59, 59, 108, 508, 993, 1122, 1157
FatI	CATG	3 cut(s)	51, 303, 489
FauI	CCCGC	1 cut(s)	35
FbaI	TGATCA	1 cut(s)	466
FblI	GTMKAC	1 cut(s)	111
FokI	GGATG	4 cut(s)	177, 320, 810, 1392
FriOI	GRGCYC	2 cut(s)	898, 1332
FspBI	CTAG	5 cut(s)	713, 1001, 1362, 1484, 1553
GlaI	GCGC	3 cut(s)	416, 636, 1290
GsaI	CCCAGC	3 cut(s)	462, 821, 1062
GsuI	CTGGAG	1 cut(s)	825
HaeII	RGCGCY	2 cut(s)	638, 1292
HaeIII	GGCC	3 cut(s)	95, 561, 822
HgaI	GACGC	2 cut(s)	122, 333
HhaI	GCGC	3 cut(s)	417, 637, 1291
Hin1I	GRCGYC	3 cut(s)	114, 635, 1289
Hin1II	CATG	3 cut(s)	55, 307, 493
Hin6I	GCGC	3 cut(s)	415, 635, 1289
HinP1I	GCGC	3 cut(s)	415, 635, 1289
HincII	GTYRAC	2 cut(s)	112, 331
HindII	GTYRAC	2 cut(s)	112, 331
HindIII	AAGCTT	1 cut(s)	335
HinfI	GANTC	8 cut(s)	102, 187, 197, 584, 674, 723, 1490, 1581
HphI	GGTGA	6 cut(s)	29, 152, 476, 986, 1038, 1340
Hpy166II	GTNNAC	4 cut(s)	20, 112, 331, 601
Hpy188I	TCNGA	7 cut(s)	186, 222, 576, 722, 935, 1099, 1334
Hpy8I	GTNNAC	4 cut(s)	20, 112, 331, 601
Hpy99I	CGWCG	5 cut(s)	27, 116, 1226, 1591, 1619
HpyAV	CCTTC	1 cut(s)	687
HpyCH4III	ACNGT	4 cut(s)	109, 1106, 1185, 1465
HpyCH4IV	ACGT	4 cut(s)	22, 230, 497, 1345
HpyF3I	CTNAG	3 cut(s)	291, 388, 932
HpySE526I	ACGT	4 cut(s)	22, 230, 497, 1345
Hsp92I	GRCGYC	3 cut(s)	114, 635, 1289
Hsp92II	CATG	3 cut(s)	55, 307, 493
HspAI	GCGC	3 cut(s)	415, 635, 1289
KasI	GGCGCC	2 cut(s)	634, 1288
Kpn2I	TCCGGA	2 cut(s)	193, 1562
KroI	GCCGGC	3 cut(s)	1285, 1306, 1414
KroNI	GCCGGC	3 cut(s)	1287, 1308, 1416
Ksp22I	TGATCA	1 cut(s)	466
KspI	CCGCGG	1 cut(s)	1091
Kzo9I	GATC	8 cut(s)	284, 466, 627, 763, 905, 1003, 1035, 1296
LmnI	GCTCC	4 cut(s)	743, 806, 893, 1099
LweI	GCATC	3 cut(s)	298, 320, 1609
MaeI	CTAG	5 cut(s)	713, 1001, 1362, 1484, 1553
MaeII	ACGT	4 cut(s)	22, 230, 497, 1345
MaeIII	GTNAC	7 cut(s)	33, 103, 140, 206, 781, 799, 1346
MalI	GATC	8 cut(s)	286, 468, 629, 765, 907, 1005, 1037, 1298
MboI	GATC	8 cut(s)	284, 466, 627, 763, 905, 1003, 1035, 1296
MboII	GAAGA	9 cut(s)	68, 291, 364, 593, 891, 1045, 1073, 1254, 1603
MfeI	CAATTG	1 cut(s)	622
MflI	RGATCY	1 cut(s)	627
MhlI	GDGCHC	5 cut(s)	898, 1104, 1210, 1332, 1393
MluCI	AATT	7 cut(s)	323, 357, 519, 604, 622, 1160, 1472
Mly113I	GGCGCC	2 cut(s)	635, 1289
MlyI	GAGTC	4 cut(s)	111, 181, 593, 732
MmeI	TCCRAC	1 cut(s)	1347
Mph1103I	ATGCAT	1 cut(s)	313
MroI	TCCGGA	2 cut(s)	193, 1562
MroNI	GCCGGC	3 cut(s)	1285, 1306, 1414
MseI	TTAA	2 cut(s)	408, 1163
MslI	CAYNNNNRTG	1 cut(s)	1353
MspA1I	CMGCKG	2 cut(s)	395, 1090
MspR9I	CCNGG	4 cut(s)	276, 349, 903, 1432
MunI	CAATTG	1 cut(s)	622
Mva1269I	GAATGC	1 cut(s)	229
MvaI	CCWGG	3 cut(s)	349, 903, 1432
MvnI	CGCG	3 cut(s)	27, 344, 1090
NaeI	GCCGGC	3 cut(s)	1287, 1308, 1416
NarI	GGCGCC	2 cut(s)	635, 1289
NciI	CCSGG	1 cut(s)	276
NcoI	CCATGG	2 cut(s)	303, 489
NdeII	GATC	8 cut(s)	284, 466, 627, 763, 905, 1003, 1035, 1296
NgoMIV	GCCGGC	3 cut(s)	1285, 1306, 1414
NheI	GCTAGC	1 cut(s)	1552
NlaIII	CATG	3 cut(s)	55, 307, 493
NlaIV	GGNNCC	8 cut(s)	8, 75, 431, 480, 636, 759, 895, 1290
NmeAIII	GCCGAG	1 cut(s)	611
NmuCI	GTSAC	4 cut(s)	103, 140, 206, 1346
NsiI	ATGCAT	1 cut(s)	313
OliI	CACNNNNGTG	1 cut(s)	1353
PceI	AGGCCT	1 cut(s)	95
PcsI	WCGNNNNNNNCGW	5 cut(s)	650, 1132, 1351, 1592, 1623
PctI	GAATGC	1 cut(s)	229
PdiI	GCCGGC	3 cut(s)	1287, 1308, 1416
PfeI	GAWTC	4 cut(s)	197, 674, 1490, 1581
PflFI	GACNNNGTC	1 cut(s)	116
PfoI	TCCNGGA	1 cut(s)	347
Ple19I	CGATCG	1 cut(s)	1299
PleI	GAGTC	4 cut(s)	110, 181, 592, 731
PluTI	GGCGCC	2 cut(s)	638, 1292
PpsI	GAGTC	4 cut(s)	110, 181, 592, 731
Psp124BI	GAGCTC	1 cut(s)	1332
Psp1406I	AACGTT	1 cut(s)	230
Psp6I	CCWGG	3 cut(s)	347, 901, 1430
PspFI	CCCAGC	3 cut(s)	458, 817, 1058
PspGI	CCWGG	3 cut(s)	347, 901, 1430
PspN4I	GGNNCC	8 cut(s)	8, 75, 431, 480, 636, 759, 895, 1290
PspPI	GGNCC	3 cut(s)	73, 820, 1565
PstI	CTGCAG	3 cut(s)	93, 400, 1056
PsuI	RGATCY	1 cut(s)	627
PsyI	GACNNNGTC	1 cut(s)	116
PvuI	CGATCG	1 cut(s)	1299
PvuII	CAGCTG	1 cut(s)	395
RsaI	GTAC	5 cut(s)	703, 1302, 1399, 1436, 1442
RsaNI	GTAC	5 cut(s)	702, 1301, 1398, 1435, 1441
RseI	CAYNNNNRTG	1 cut(s)	1353
SacI	GAGCTC	1 cut(s)	1332
SacII	CCGCGG	1 cut(s)	1091
SalI	GTCGAC	1 cut(s)	110
SaqAI	TTAA	2 cut(s)	408, 1163
Sau3AI	GATC	8 cut(s)	284, 466, 627, 763, 905, 1003, 1035, 1296
Sau96I	GGNCC	3 cut(s)	73, 820, 1565
SchI	GAGTC	4 cut(s)	111, 181, 593, 732
ScrFI	CCNGG	4 cut(s)	276, 349, 903, 1432
SduI	GDGCHC	5 cut(s)	898, 1104, 1210, 1332, 1393
SfaNI	GCATC	3 cut(s)	298, 320, 1609
SfcI	CTRYAG	3 cut(s)	89, 396, 1052
SfoI	GGCGCC	2 cut(s)	636, 1290
Sfr303I	CCGCGG	1 cut(s)	1091
SgrBI	CCGCGG	1 cut(s)	1091
SinI	GGWCC	2 cut(s)	73, 1565
SmiMI	CAYNNNNRTG	1 cut(s)	1353
Sse9I	AATT	7 cut(s)	323, 357, 519, 604, 622, 1160, 1472
SseBI	AGGCCT	1 cut(s)	95
SspDI	GGCGCC	2 cut(s)	634, 1288
SspMI	CTAG	5 cut(s)	713, 1001, 1362, 1484, 1553
SstI	GAGCTC	1 cut(s)	1332
StuI	AGGCCT	1 cut(s)	95
StyD4I	CCNGG	4 cut(s)	274, 347, 901, 1430
StyI	CCWWGG	2 cut(s)	303, 489
TaaI	ACNGT	4 cut(s)	109, 1106, 1185, 1465
TaiI	ACGT	4 cut(s)	25, 233, 500, 1348
TaqI	TCGA	5 cut(s)	111, 644, 677, 1295, 1579
TasI	AATT	7 cut(s)	323, 357, 519, 604, 622, 1160, 1472
TatI	WGTACW	1 cut(s)	701
TauI	GCSGC	9 cut(s)	153, 344, 930, 959, 1093, 1252, 1272, 1313, 1421
TfiI	GAWTC	4 cut(s)	197, 674, 1490, 1581
Tru1I	TTAA	2 cut(s)	408, 1163
Tru9I	TTAA	2 cut(s)	408, 1163
TscAI	CASTG	5 cut(s)	93, 112, 1018, 1024, 1460
TseFI	GTSAC	4 cut(s)	103, 140, 206, 1346
Tsp45I	GTSAC	4 cut(s)	103, 140, 206, 1346
TspDTI	ATGAA	3 cut(s)	152, 520, 687
TspGWI	ACGGA	3 cut(s)	769, 831, 1343
TspRI	CASTG	5 cut(s)	93, 112, 1018, 1024, 1460
Tth111I	GACNNNGTC	1 cut(s)	116
VpaK11BI	GGWCC	2 cut(s)	73, 1565
XagI	CCTNNNNNAGG	1 cut(s)	873
XmiI	GTMKAC	1 cut(s)	111
XspI	CTAG	5 cut(s)	713, 1001, 1362, 1484, 1553
Zsp2I	ATGCAT	1 cut(s)	313

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.