Rh6DG498300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Reverse (-)
65553866 .. 65554075
210 bp
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UTR
Exon/CDS
Intron
Rh6DG498300.1

Sequence Viewer

Length: 210 bp
ATGGAGATGCCGAGGACCCAGATGTGGAGAATAAGGTCGACGAAAGAAGATAGTAGAAACATCAGATGCCCAGAAAGATTAGTGCTTCTGGGGGTTGAATTGATGGGCAGTGATCGGTGGGTCTTGGTCGGCGATGAAACATGCCCATTGGACGGTGGTGAGGGCTGGAGTCGATGGGGAGATGACGGTAGAGAAGAGGTGCAACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

69

Amino Acids

8.05

Weight (kDa)

4.71

Isoelectric Point (pI)

69.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 38
AfiI CCNNNNNNNGG 2 cut(s) 24, 152
AgsI TTSAA 1 cut(s) 98
AspS9I GGNCC 1 cut(s) 15
AsuHPI GGTGA 1 cut(s) 170
AvaII GGWCC 1 cut(s) 15
BccI CCATC 2 cut(s) 97, 168
Bme18I GGWCC 1 cut(s) 15
BmgT120I GGNCC 1 cut(s) 15
BmiI GGNNCC 1 cut(s) 17
BmsI GCATC 1 cut(s) 56
BpmI CTGGAG 1 cut(s) 187
BsaJI CCNNGG 1 cut(s) 11
Bsc4I CCNNNNNNNGG 2 cut(s) 24, 152
BseDI CCNNGG 1 cut(s) 11
BseLI CCNNNNNNNGG 2 cut(s) 24, 152
BslI CCNNNNNNNGG 2 cut(s) 24, 152
Bsp143I GATC 1 cut(s) 112
BspLI GGNNCC 1 cut(s) 17
BssECI CCNNGG 1 cut(s) 11
BssMI GATC 1 cut(s) 112
Bst4CI ACNGT 3 cut(s) 155, 188, 207
Bst6I CTCTTC 1 cut(s) 189
BstKTI GATC 1 cut(s) 115
BstMBI GATC 1 cut(s) 112
BstNSI RCATGY 1 cut(s) 144
BtgZI GCGATG 1 cut(s) 147
BtsI GCAGTG 1 cut(s) 115
BtsIMutI CAGTG 1 cut(s) 115
Cfr13I GGNCC 1 cut(s) 15
CviAII CATG 1 cut(s) 141
CviJI RGCY 1 cut(s) 165
CviKI_1 RGCY 1 cut(s) 165
DpnI GATC 1 cut(s) 114
DpnII GATC 1 cut(s) 112
Eam1104I CTCTTC 1 cut(s) 189
EarI CTCTTC 1 cut(s) 189
Eco47I GGWCC 1 cut(s) 15
EcoO109I RGGNCCY 1 cut(s) 15
FaeI CATG 1 cut(s) 144
FaiI YATR 1 cut(s) 142
FatI CATG 1 cut(s) 140
FblI GTMKAC 1 cut(s) 38
GsuI CTGGAG 1 cut(s) 187
Hin1II CATG 1 cut(s) 144
HincII GTYRAC 1 cut(s) 39
HindII GTYRAC 1 cut(s) 39
HinfI GANTC 1 cut(s) 169
HphI GGTGA 1 cut(s) 170
Hpy166II GTNNAC 1 cut(s) 39
Hpy188I TCNGA 1 cut(s) 65
Hpy8I GTNNAC 1 cut(s) 39
Hpy99I CGWCG 1 cut(s) 43
HpyCH4III ACNGT 3 cut(s) 155, 188, 207
HpyCH4V TGCA 1 cut(s) 202
Hsp92II CATG 1 cut(s) 144
Kzo9I GATC 1 cut(s) 112
LpnPI CCDG 4 cut(s) 32, 74, 84, 151
LweI GCATC 1 cut(s) 56
MalI GATC 1 cut(s) 114
MboI GATC 1 cut(s) 112
MboII GAAGA 2 cut(s) 59, 206
MluCI AATT 1 cut(s) 98
MlyI GAGTC 1 cut(s) 178
MnlI CCTC 3 cut(s) 6, 154, 190
NdeII GATC 1 cut(s) 112
NlaIII CATG 1 cut(s) 144
NlaIV GGNNCC 1 cut(s) 17
NmeAIII GCCGAG 1 cut(s) 36
NspI RCATGY 1 cut(s) 144
PleI GAGTC 1 cut(s) 177
PpsI GAGTC 1 cut(s) 177
PpuMI RGGWCCY 1 cut(s) 15
Psp5II RGGWCCY 1 cut(s) 15
PspN4I GGNNCC 1 cut(s) 17
PspPI GGNCC 1 cut(s) 15
PspPPI RGGWCCY 1 cut(s) 15
SalI GTCGAC 1 cut(s) 37
Sau3AI GATC 1 cut(s) 112
Sau96I GGNCC 1 cut(s) 15
SchI GAGTC 1 cut(s) 178
SetI ASST 2 cut(s) 38, 201
SfaNI GCATC 1 cut(s) 56
SgeI CNNG 7 cut(s) 24, 31, 83, 101, 136, 153, 178
SinI GGWCC 1 cut(s) 15
Sse9I AATT 1 cut(s) 98
TaaI ACNGT 3 cut(s) 155, 188, 207
TaqI TCGA 2 cut(s) 38, 172
TasI AATT 1 cut(s) 98
TscAI CASTG 1 cut(s) 115
TspDTI ATGAA 1 cut(s) 150
TspRI CASTG 1 cut(s) 115
VpaK11BI GGWCC 1 cut(s) 15
XceI RCATGY 1 cut(s) 144
XmiI GTMKAC 1 cut(s) 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.