RLG00000028134

Signal peptide peptidase-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
19109832 .. 19118895
9064 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028134

Sequence Viewer

Length: 1365 bp
ATGGTTTGTGAAGACGACGAGCCTGATGTCGAGATAGGCATACCTGCTGTTATGCTTCCCAACAAAATTGGTGAAATCTTGGAAAATGGATTAACGAACAATTCCATAGTGCTGTATATGTGGCTTCAATTCTTGCTGGGTGAAGGTGCCAGTCCTCTAGTGGAGATTAGCACCATGGCAGCAATTCTCTTTGTTGTGATTGCTTCATGCTTCTTGGTTATGTTTTACAAACTTATGTCCTTCTGGTTCATCGAGATTCTGGTGGTTTTGTTTTGCATTGGTGGGATAGAGGGCCTACAGACTTGCTTGGTGGCCTTGCTATCATGTTTCAGACGGTTTAAACGTGCTGGAGAATCATATGTTAAGGTGCCCTTCTTTGGAGCTGTTTTATATTTGACACTAGCTGTCGCTCCCTTCTGCATAGCATTTGCTGTTGTTTGGGCAGTGTATCGCCGTGTGTCATTTGCTTGGATTGGCCAAGATATCCTTGGTATTGCACTGATAATCACCGTTCTTCAGATTGTTCGCGTACCGAATCTCAAGGTTGGAACAGTTCTTCTCAGTTGTGCCTTTTTTTATGACATCTTCTGGGTATTTGTTTCTAAATGGTGGTTCCATGAGAGTGTCATGATAGTGGTGGCTCGTGGTGATAAAAGTGGAGAGGATGGTATCCCAATGCTACTAAAAATCCCACGGATGTTTGATCCTTGGGGTGGCTATAGCATCATTGGGTTTGGTGATATTATCTTACCTGGATTGGTTGTAGCCTTTTCACTAAGAGTTCTGTTTTTTGACGAGAAGGAACTGGGTATTGCACTGATAATCACCGTTCTTCAGATTGTTCGTGTACCAAATCTCAAGGTTGGAACAGTTCTTCTCGGTTGTGCCTTTTTTTATGACATCTTCTGGGTATTTGTTTCTAAATGGTGGTTCCATGTGAGTGTCATGATAGTGGTGGCTCGTGGTGATAAAAGTGGAGAGGATGGTATCCCAATGCTACTAAAAATCCCACGGATGTTTGATCCTTGGGGTGGCTACAGCATCATCGGGTTTGGTGATATTATCTTACCTGGATTGGTTGTAGCCTTTTCACTAAGGTATGATTGGTTGACAAATAAGACTCTTCGAACGGGTTACTTTGTGTGGGCAATGACAGCTTATGGTGCAGGTCTCCTGGTCACCTATGTGGCTTTGAACTTGATGGATGGACATGGCCAACCTGCTTTGTTATACGTAGTTCCATTCACACTTGGTACCTTCTTAACCTTGGGACAGATGAGAGGTGACCTCAAAGTTCTGTGGACAAGAGGAGAACCAGAGAGGCCTTGCCCGCACGTACGACTCCAATCCTCTCACTCTCAATAG

Protein Analysis

455

Amino Acids

50.85

Weight (kDa)

6.24

Isoelectric Point (pI)

34.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_A22B PF04258 54 - 261 7.5e-69 Signal peptide peptidase
Peptidase_A22B PF04258 269 - 438 5.6e-73 Signal peptide peptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 52, 1157, 1228
Acc65I GGTACC 1 cut(s) 1253
AccB1I GGYRCC 3 cut(s) 146, 367, 1253
AccII CGCG 1 cut(s) 528
AciI CCGC 1 cut(s) 1331
AclWI GGATC 2 cut(s) 698, 1016
AcoI YGGCCR 2 cut(s) 475, 1213
AcuI CTGAAG 2 cut(s) 500, 818
AfaI GTAC 4 cut(s) 531, 849, 1255, 1338
AfiI CCNNNNNNNGG 3 cut(s) 377, 713, 1031
AgsI TTSAA 2 cut(s) 128, 1195
AjnI CCWGG 3 cut(s) 751, 1069, 1173
AleI CACNNNNGTG 1 cut(s) 1184
AluBI AGCT 3 cut(s) 383, 404, 1157
AluI AGCT 3 cut(s) 383, 404, 1157
Alw26I GTCTC 1 cut(s) 1175
AlwI GGATC 2 cut(s) 698, 1016
AoxI GGCC 5 cut(s) 292, 312, 475, 1213, 1322
ApeKI GCWGC 1 cut(s) 179
Asp718I GGTACC 1 cut(s) 1253
AspS9I GGNCC 1 cut(s) 292
AsuII TTCGAA 1 cut(s) 1126
BaeGI GKGCMC 1 cut(s) 372
BalI TGGCCA 2 cut(s) 477, 1215
BanI GGYRCC 3 cut(s) 146, 367, 1253
BauI CACGAG 2 cut(s) 642, 960
BbsI GAAGAC 1 cut(s) 18
BbvI GCAGC 1 cut(s) 191
BccI CCATC 4 cut(s) 659, 977, 1195, 1199
BceAI ACGGC 1 cut(s) 438
BciT130I CCWGG 3 cut(s) 753, 1071, 1175
BciVI GTATCC 2 cut(s) 680, 998
BcoDI GTCTC 1 cut(s) 1175
BfaI CTAG 2 cut(s) 158, 401
BfmI CTRYAG 3 cut(s) 296, 718, 1036
BfuAI ACCTGC 3 cut(s) 52, 1157, 1228
BfuI GTATCC 2 cut(s) 680, 998
BisI GCNGC 1 cut(s) 180
BlsI GCNGC 1 cut(s) 181
Bme1390I CCNGG 3 cut(s) 753, 1071, 1175
BmgT120I GGNCC 1 cut(s) 292
BmiI GGNNCC 5 cut(s) 148, 369, 614, 932, 1255
BmrFI CCNGG 3 cut(s) 753, 1071, 1175
BmrI ACTGGG 1 cut(s) 815
BmsI GCATC 2 cut(s) 732, 1050
BmuI ACTGGG 1 cut(s) 815
BpiI GAAGAC 1 cut(s) 18
BplI GAGNNNNNCTC 2 cut(s) 1272, 1304
BpmI CTGGAG 1 cut(s) 369
Bpu14I TTCGAA 1 cut(s) 1126
BpuEI CTTGAG 2 cut(s) 524, 842
BsaAI YACGTR 2 cut(s) 1234, 1336
BsaI GGTCTC 1 cut(s) 1175
BsaJI CCNNGG 7 cut(s) 174, 487, 692, 707, 1010, 1025, 1266
Bsc4I CCNNNNNNNGG 3 cut(s) 377, 713, 1031
Bse1I ACTGG 2 cut(s) 150, 810
Bse3DI GCAATG 1 cut(s) 1155
BseBI CCWGG 3 cut(s) 753, 1071, 1175
BseDI CCNNGG 7 cut(s) 174, 487, 692, 707, 1010, 1025, 1266
BseGI GGATG 5 cut(s) 670, 702, 988, 1020, 1210
BseLI CCNNNNNNNGG 3 cut(s) 377, 713, 1031
BseMI GCAATG 1 cut(s) 1155
BseMII CTCAG 1 cut(s) 574
BseNI ACTGG 2 cut(s) 150, 810
BseRI GAGGAG 1 cut(s) 1323
BseSI GKGCMC 1 cut(s) 372
BseXI GCAGC 1 cut(s) 191
BseYI CCCAGC 1 cut(s) 136
BsgI GTGCAG 1 cut(s) 1185
Bsh1236I CGCG 1 cut(s) 528
BshFI GGCC 5 cut(s) 294, 314, 477, 1215, 1324
BshNI GGYRCC 3 cut(s) 146, 367, 1253
BsiWI CGTACG 1 cut(s) 1336
BslFI GGGAC 1 cut(s) 1284
BslI CCNNNNNNNGG 3 cut(s) 377, 713, 1031
BsmAI GTCTC 1 cut(s) 1175
BsmFI GGGAC 1 cut(s) 1284
BsnI GGCC 5 cut(s) 294, 314, 477, 1215, 1324
Bso31I GGTCTC 1 cut(s) 1175
Bsp119I TTCGAA 1 cut(s) 1126
Bsp1286I GDGCHC 1 cut(s) 372
Bsp143I GATC 2 cut(s) 703, 1021
Bsp19I CCATGG 1 cut(s) 174
BspACI CCGC 1 cut(s) 1331
BspANI GGCC 5 cut(s) 294, 314, 477, 1215, 1324
BspCNI CTCAG 1 cut(s) 573
BspFNI CGCG 1 cut(s) 528
BspHI TCATGA 2 cut(s) 627, 945
BspLI GGNNCC 5 cut(s) 148, 369, 614, 932, 1255
BspMI ACCTGC 3 cut(s) 52, 1157, 1228
BspPI GGATC 2 cut(s) 698, 1016
BspT104I TTCGAA 1 cut(s) 1126
BspT107I GGYRCC 3 cut(s) 146, 367, 1253
BspTNI GGTCTC 1 cut(s) 1175
BsrDI GCAATG 1 cut(s) 1155
BsrI ACTGG 2 cut(s) 150, 810
BssECI CCNNGG 7 cut(s) 174, 487, 692, 707, 1010, 1025, 1266
BssMI GATC 2 cut(s) 703, 1021
BssSI CACGAG 2 cut(s) 642, 960
BssT1I CCWWGG 5 cut(s) 174, 487, 707, 1025, 1266
Bst2BI CACGAG 2 cut(s) 642, 960
Bst2UI CCWGG 3 cut(s) 753, 1071, 1175
Bst4CI ACNGT 5 cut(s) 336, 511, 553, 829, 871
Bst6I CTCTTC 1 cut(s) 1128
BstBAI YACGTR 2 cut(s) 1234, 1336
BstBI TTCGAA 1 cut(s) 1126
BstC8I GCNNGC 1 cut(s) 1331
BstDEI CTNAG 3 cut(s) 560, 776, 1094
BstDSI CCRYGG 3 cut(s) 174, 692, 1010
BstEII GGTNACC 2 cut(s) 1177, 1283
BstF5I GGATG 5 cut(s) 670, 702, 988, 1020, 1210
BstFNI CGCG 1 cut(s) 528
BstKTI GATC 2 cut(s) 706, 1024
BstMAI GTCTC 1 cut(s) 1175
BstMBI GATC 2 cut(s) 703, 1021
BstMWI GCNNNNNNNGC 3 cut(s) 1154, 1163, 1330
BstNI CCWGG 3 cut(s) 753, 1071, 1175
BstPI GGTNACC 2 cut(s) 1177, 1283
BstSCI CCNGG 3 cut(s) 751, 1069, 1173
BstSFI CTRYAG 3 cut(s) 296, 718, 1036
BstSLI GKGCMC 1 cut(s) 372
BstSNI TACGTA 1 cut(s) 1234
BstUI CGCG 1 cut(s) 528
BstV1I GCAGC 1 cut(s) 191
BstV2I GAAGAC 1 cut(s) 18
BsuI GTATCC 2 cut(s) 680, 998
BsuRI GGCC 5 cut(s) 294, 314, 477, 1215, 1324
BtgI CCRYGG 3 cut(s) 174, 692, 1010
BtsCI GGATG 5 cut(s) 670, 702, 988, 1020, 1210
BtsI GCAGTG 1 cut(s) 450
BtsIMutI CAGTG 3 cut(s) 450, 497, 815
BveI ACCTGC 3 cut(s) 52, 1157, 1228
Cac8I GCNNGC 1 cut(s) 1331
CciI TCATGA 2 cut(s) 627, 945
Cfr13I GGNCC 1 cut(s) 292
Csp6I GTAC 4 cut(s) 530, 848, 1254, 1337
CviAII CATG 8 cut(s) 175, 207, 324, 617, 628, 935, 946, 1211
CviQI GTAC 4 cut(s) 530, 848, 1254, 1337
DdeI CTNAG 3 cut(s) 560, 776, 1094
DpnI GATC 2 cut(s) 705, 1023
DpnII GATC 2 cut(s) 703, 1021
DraI TTTAAA 1 cut(s) 340
EaeI YGGCCR 2 cut(s) 475, 1213
Eam1104I CTCTTC 1 cut(s) 1128
EarI CTCTTC 1 cut(s) 1128
Eco105I TACGTA 1 cut(s) 1234
Eco130I CCWWGG 5 cut(s) 174, 487, 707, 1025, 1266
Eco147I AGGCCT 1 cut(s) 1324
Eco31I GGTCTC 1 cut(s) 1175
Eco32I GATATC 1 cut(s) 484
Eco57I CTGAAG 2 cut(s) 500, 818
Eco91I GGTNACC 2 cut(s) 1177, 1283
EcoO109I RGGNCCY 1 cut(s) 292
EcoO65I GGTNACC 2 cut(s) 1177, 1283
EcoRII CCWGG 3 cut(s) 751, 1069, 1173
EcoRV GATATC 1 cut(s) 484
EcoT14I CCWWGG 5 cut(s) 174, 487, 707, 1025, 1266
ErhI CCWWGG 5 cut(s) 174, 487, 707, 1025, 1266
FaeI CATG 8 cut(s) 178, 210, 327, 620, 631, 938, 949, 1214
FalI AAGNNNNNCTT 4 cut(s) 356, 388, 471, 503
FaqI GGGAC 1 cut(s) 1284
FatI CATG 8 cut(s) 174, 206, 323, 616, 627, 934, 945, 1210
FauI CCCGC 1 cut(s) 1338
FauNDI CATATG 1 cut(s) 358
Fnu4HI GCNGC 1 cut(s) 180
FokI GGATG 5 cut(s) 677, 709, 995, 1027, 1217
Fsp4HI GCNGC 1 cut(s) 180
FspBI CTAG 2 cut(s) 158, 401
GluI GCNGC 1 cut(s) 180
GsaI CCCAGC 1 cut(s) 140
GsuI CTGGAG 1 cut(s) 369
HaeIII GGCC 5 cut(s) 294, 314, 477, 1215, 1324
Hin1II CATG 8 cut(s) 178, 210, 327, 620, 631, 938, 949, 1214
HincII GTYRAC 1 cut(s) 1110
HindII GTYRAC 1 cut(s) 1110
HinfI GANTC 5 cut(s) 256, 353, 535, 1120, 1341
Hpy166II GTNNAC 3 cut(s) 848, 1110, 1302
Hpy188I TCNGA 3 cut(s) 332, 519, 837
Hpy188III TCNNGA 4 cut(s) 31, 253, 628, 946
Hpy8I GTNNAC 3 cut(s) 848, 1110, 1302
Hpy99I CGWCG 1 cut(s) 20
HpyAV CCTTC 6 cut(s) 137, 250, 382, 424, 793, 1267
HpyCH4III ACNGT 5 cut(s) 336, 511, 553, 829, 871
HpyCH4IV ACGT 3 cut(s) 343, 1233, 1335
HpyCH4V TGCA 5 cut(s) 276, 420, 497, 815, 1166
HpyF10VI GCNNNNNNNGC 3 cut(s) 1154, 1163, 1330
HpyF3I CTNAG 3 cut(s) 560, 776, 1094
HpySE526I ACGT 3 cut(s) 343, 1233, 1335
Hsp92II CATG 8 cut(s) 178, 210, 327, 620, 631, 938, 949, 1214
KpnI GGTACC 1 cut(s) 1257
Kzo9I GATC 2 cut(s) 703, 1021
LmnI GCTCC 2 cut(s) 380, 415
Lsp1109I GCAGC 1 cut(s) 191
LweI GCATC 2 cut(s) 732, 1050
MaeI CTAG 2 cut(s) 158, 401
MaeII ACGT 3 cut(s) 343, 1233, 1335
MaeIII GTNAC 3 cut(s) 1133, 1177, 1283
MalI GATC 2 cut(s) 705, 1023
MboI GATC 2 cut(s) 703, 1021
MboII GAAGA 8 cut(s) 23, 506, 548, 577, 824, 866, 895, 1115
MhlI GDGCHC 1 cut(s) 372
MlsI TGGCCA 2 cut(s) 477, 1215
MluCI AATT 4 cut(s) 66, 100, 128, 183
MluNI TGGCCA 2 cut(s) 477, 1215
MlyI GAGTC 2 cut(s) 1114, 1335
MmeI TCCRAC 2 cut(s) 526, 844
MnlI CCTC 9 cut(s) 165, 283, 655, 973, 1274, 1298, 1301, 1314, 1360
Mox20I TGGCCA 2 cut(s) 477, 1215
MscI TGGCCA 2 cut(s) 477, 1215
MseI TTAA 4 cut(s) 92, 339, 363, 1262
MslI CAYNNNNRTG 5 cut(s) 621, 632, 939, 950, 1184
Msp20I TGGCCA 2 cut(s) 477, 1215
MspR9I CCNGG 3 cut(s) 753, 1071, 1175
MssI GTTTAAAC 1 cut(s) 340
MvaI CCWGG 3 cut(s) 753, 1071, 1175
MvnI CGCG 1 cut(s) 528
MwoI GCNNNNNNNGC 3 cut(s) 1154, 1163, 1330
NcoI CCATGG 1 cut(s) 174
NdeI CATATG 1 cut(s) 358
NdeII GATC 2 cut(s) 703, 1021
NlaIII CATG 8 cut(s) 178, 210, 327, 620, 631, 938, 949, 1214
NlaIV GGNNCC 5 cut(s) 148, 369, 614, 932, 1255
NmuCI GTSAC 2 cut(s) 1177, 1283
NspV TTCGAA 1 cut(s) 1126
OliI CACNNNNGTG 1 cut(s) 1184
PagI TCATGA 2 cut(s) 627, 945
PceI AGGCCT 1 cut(s) 1324
PcsI WCGNNNNNNNCGW 1 cut(s) 340
PfeI GAWTC 3 cut(s) 256, 353, 535
Pfl23II CGTACG 1 cut(s) 1336
PkrI GCNGC 1 cut(s) 181
PleI GAGTC 2 cut(s) 1114, 1335
PmeI GTTTAAAC 1 cut(s) 340
PpsI GAGTC 2 cut(s) 1114, 1335
Ppu21I YACGTR 2 cut(s) 1234, 1336
Psp6I CCWGG 3 cut(s) 751, 1069, 1173
PspEI GGTNACC 2 cut(s) 1177, 1283
PspFI CCCAGC 1 cut(s) 136
PspGI CCWGG 3 cut(s) 751, 1069, 1173
PspLI CGTACG 1 cut(s) 1336
PspN4I GGNNCC 5 cut(s) 148, 369, 614, 932, 1255
PspPI GGNCC 1 cut(s) 292
RsaI GTAC 4 cut(s) 531, 849, 1255, 1338
RsaNI GTAC 4 cut(s) 530, 848, 1254, 1337
RseI CAYNNNNRTG 5 cut(s) 621, 632, 939, 950, 1184
SaqAI TTAA 4 cut(s) 92, 339, 363, 1262
SatI GCNGC 1 cut(s) 180
Sau3AI GATC 2 cut(s) 703, 1021
Sau96I GGNCC 1 cut(s) 292
SchI GAGTC 2 cut(s) 1114, 1335
ScrFI CCNGG 3 cut(s) 753, 1071, 1175
SduI GDGCHC 1 cut(s) 372
SfaNI GCATC 2 cut(s) 732, 1050
SfcI CTRYAG 3 cut(s) 296, 718, 1036
SfuI TTCGAA 1 cut(s) 1126
SmiMI CAYNNNNRTG 5 cut(s) 621, 632, 939, 950, 1184
SmlI CTYRAG 2 cut(s) 539, 857
SmoI CTYRAG 2 cut(s) 539, 857
SnaBI TACGTA 1 cut(s) 1234
Sse9I AATT 4 cut(s) 66, 100, 128, 183
SseBI AGGCCT 1 cut(s) 1324
SsiI CCGC 1 cut(s) 1331
SspMI CTAG 2 cut(s) 158, 401
StuI AGGCCT 1 cut(s) 1324
StyD4I CCNGG 3 cut(s) 751, 1069, 1173
StyI CCWWGG 5 cut(s) 174, 487, 707, 1025, 1266
TaaI ACNGT 5 cut(s) 336, 511, 553, 829, 871
TaiI ACGT 3 cut(s) 346, 1236, 1338
TaqI TCGA 3 cut(s) 30, 252, 1126
TasI AATT 4 cut(s) 66, 100, 128, 183
TfiI GAWTC 3 cut(s) 256, 353, 535
Tru1I TTAA 4 cut(s) 92, 339, 363, 1262
Tru9I TTAA 4 cut(s) 92, 339, 363, 1262
TscAI CASTG 3 cut(s) 450, 504, 822
TseFI GTSAC 2 cut(s) 1177, 1283
TseI GCWGC 1 cut(s) 179
Tsp45I GTSAC 2 cut(s) 1177, 1283
TspDTI ATGAA 2 cut(s) 195, 238
TspGWI ACGGA 2 cut(s) 709, 1027
TspRI CASTG 3 cut(s) 450, 504, 822
XcmI CCANNNNNNNNNTGG 2 cut(s) 157, 485
XspI CTAG 2 cut(s) 158, 401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.