RLG00000028145

Signal peptide peptidase-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
19333898 .. 19362137
28240 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028145

Sequence Viewer

Length: 1302 bp
ATGAAAAGAAAAAAAAAAAAAACCTCTAATCATGTTTTCTACGCTTTGTACGCATTCAGCGCCTTCACACCTTGCCATCAAATCTCAGGCAAGAATGATGGCAAAAGACGCCTTGCGGTCCGCGGCGGTTCGGTCGCAGAGGAGTTAACCTCCAATCTCCTTTCAGTTTCGGGTCGGGTCGGAGTTTCCCTCGGACCGGCTGTGCTGGTGCCGAGTCTCACCATCATCATCATAAATAACCGTCCAGAACTTTTCAAGATGGTTTGTGAAGACGACGAGCCTGATGTCGAGATAGGCATACCTGCTGTTATGCTTCCCAACAAAATTGGTGAAATCTTGGAAAATGGATTAACGAACAATTCCATAGTTTCTGTGCAGCTATACTCTCCATTGCGTCCACTGGTTGACATTGCAGAAGTATTTTTATGGCTTATGGCTGTTGGTACCATCTTATTTGCTTCTTATTGGTCTGCATGGACTGCAAGAGAAGCGGCTATTGAGCATGACAAGCTATTGAAGGATGCTTCTGACGAGTCTTCACATGTGGAAGGTGAAGGTGCCAGTCCTCTAGTGGAGATTAGCACCATGGCAGCAATTCTCTTTGTTGTGATTGCTTCATGCTTCTTGGGCCTACAGACTTGCTTGGTGGCCTTGCTATCATGTTTCAGACGGTTTAAACGTGCTGGAGAATCATATGTTAAGGTGCCCTTCTTTGGAGCTGTTTCATATTTGACACTAGCTGTCGCTCCCTTCTGCATAGCATTTGCTGTTGTTTGGGCAATGTATCGCCGTGTGTCATTTGCTTGGATTGGCCAAGATATCCTTGTTGGAACAGTTCTTCTTGGTTGTGCCTTTTTTTATGACATCTTCTGGGTATTTGTTTCTAAATGGTGGTTCCATGAGAGTGTCATGATAGTGTTGGCTTGTGGTGATAAAAGTGGAGAGGATGGTATCCCAATGCTACTAAAAATCCCACGGATGTTTGATCCTTGGGGTGGCTGCGATCCTTGGGGTGGCTACAACATCATCGGGTTTGGTGATATTATCTTACCTGGATTGGTTGTAGCCTTTTCACTAAGGTATGATTGGTTGACAAATAAGACTCTTCGAACGGGTTACTTTGGGTGGGCAATGACAGCTTATGGTGCAGGTCTCCTGGTCACCTATGTGGCTTTGAACTTGATGGATGGACATGGCCAACCTGCTTTGTTATACATAGTTCCATTCACACTTGGTAAGATTCTAAGTTTGGATAATCTGGGCAGTAACATGCATAGTGTGCCTCCGACCTTTCTGCGCTAA

Protein Analysis

434

Amino Acids

47.67

Weight (kDa)

6.66

Isoelectric Point (pI)

41.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_A22B PF04258 199 - 275 1.2e-07 Signal peptide peptidase
Peptidase_A22B PF04258 276 - 417 1.2e-55 Signal peptide peptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 310, 1139, 1210
Acc65I GGTACC 1 cut(s) 443
AccB1I GGYRCC 4 cut(s) 208, 443, 557, 703
AccII CGCG 1 cut(s) 123
AciI CCGC 5 cut(s) 116, 121, 123, 126, 491
AclWI GGATC 2 cut(s) 980, 998
AcoI YGGCCR 2 cut(s) 811, 1195
AcyI GRCGYC 1 cut(s) 109
AfaI GTAC 2 cut(s) 50, 445
AfiI CCNNNNNNNGG 4 cut(s) 196, 713, 995, 1013
AflIII ACRYGT 1 cut(s) 541
AgsI TTSAA 3 cut(s) 256, 517, 1177
AjnI CCWGG 2 cut(s) 1051, 1155
AleI CACNNNNGTG 1 cut(s) 1166
AluBI AGCT 5 cut(s) 379, 511, 719, 740, 1139
AluI AGCT 5 cut(s) 379, 511, 719, 740, 1139
Alw26I GTCTC 2 cut(s) 221, 1157
AlwI GGATC 2 cut(s) 980, 998
AoxI GGCC 4 cut(s) 628, 648, 811, 1195
ApeKI GCWGC 3 cut(s) 376, 590, 999
Asp718I GGTACC 1 cut(s) 443
AspLEI GCGC 2 cut(s) 62, 1299
AspS9I GGNCC 3 cut(s) 118, 194, 628
AsuHPI GGTGA 6 cut(s) 211, 341, 563, 941, 1049, 1153
AsuII TTCGAA 1 cut(s) 1108
AvaII GGWCC 2 cut(s) 118, 194
BaeGI GKGCMC 1 cut(s) 708
BalI TGGCCA 2 cut(s) 813, 1197
BanI GGYRCC 4 cut(s) 208, 443, 557, 703
BbsI GAAGAC 2 cut(s) 276, 528
BbvI GCAGC 3 cut(s) 388, 602, 986
BccI CCATC 8 cut(s) 84, 92, 230, 253, 455, 941, 1177, 1181
BceAI ACGGC 1 cut(s) 774
BcgI CGANNNNNNTGC 1 cut(s) 1276
BciT130I CCWGG 2 cut(s) 1053, 1157
BciVI GTATCC 1 cut(s) 962
BcoDI GTCTC 2 cut(s) 221, 1157
BfaI CTAG 2 cut(s) 569, 737
BfmI CTRYAG 1 cut(s) 632
BfoI RGCGCY 1 cut(s) 63
BfuAI ACCTGC 3 cut(s) 310, 1139, 1210
BfuI GTATCC 1 cut(s) 962
BisI GCNGC 5 cut(s) 124, 377, 492, 591, 1000
BlsI GCNGC 5 cut(s) 125, 378, 493, 592, 1001
Bme1390I CCNGG 2 cut(s) 1053, 1157
Bme18I GGWCC 2 cut(s) 118, 194
BmgT120I GGNCC 3 cut(s) 118, 194, 628
BmiI GGNNCC 5 cut(s) 210, 445, 559, 705, 896
BmrFI CCNGG 2 cut(s) 1053, 1157
BmsI GCATC 1 cut(s) 511
BpiI GAAGAC 2 cut(s) 276, 528
BplI GAGNNNNNCTC 4 cut(s) 134, 166, 174, 206
BpmI CTGGAG 1 cut(s) 705
Bpu14I TTCGAA 1 cut(s) 1108
BsaHI GRCGYC 1 cut(s) 109
BsaI GGTCTC 1 cut(s) 1157
BsaJI CCNNGG 6 cut(s) 121, 190, 585, 974, 989, 1007
Bsc4I CCNNNNNNNGG 4 cut(s) 196, 713, 995, 1013
Bse118I RCCGGY 1 cut(s) 196
Bse1I ACTGG 2 cut(s) 405, 561
Bse3DI GCAATG 4 cut(s) 389, 408, 786, 1137
BseBI CCWGG 2 cut(s) 1053, 1157
BseDI CCNNGG 6 cut(s) 121, 190, 585, 974, 989, 1007
BseGI GGATG 4 cut(s) 526, 952, 984, 1192
BseLI CCNNNNNNNGG 4 cut(s) 196, 713, 995, 1013
BseMI GCAATG 4 cut(s) 389, 408, 786, 1137
BseMII CTCAG 1 cut(s) 99
BseNI ACTGG 2 cut(s) 405, 561
BseRI GAGGAG 1 cut(s) 155
BseSI GKGCMC 1 cut(s) 708
BseXI GCAGC 3 cut(s) 388, 602, 986
BsgI GTGCAG 2 cut(s) 395, 1167
Bsh1236I CGCG 1 cut(s) 123
Bsh1285I CGRYCG 1 cut(s) 135
BshFI GGCC 4 cut(s) 630, 650, 813, 1197
BshNI GGYRCC 4 cut(s) 208, 443, 557, 703
BsiEI CGRYCG 1 cut(s) 135
BsiSI CCGG 1 cut(s) 197
BslI CCNNNNNNNGG 4 cut(s) 196, 713, 995, 1013
BsmAI GTCTC 2 cut(s) 221, 1157
BsmI GAATGC 1 cut(s) 53
BsnI GGCC 4 cut(s) 630, 650, 813, 1197
Bso31I GGTCTC 1 cut(s) 1157
Bsp119I TTCGAA 1 cut(s) 1108
Bsp1286I GDGCHC 1 cut(s) 708
Bsp143I GATC 2 cut(s) 985, 1003
Bsp19I CCATGG 1 cut(s) 585
BspACI CCGC 5 cut(s) 116, 121, 123, 126, 491
BspANI GGCC 4 cut(s) 630, 650, 813, 1197
BspCNI CTCAG 1 cut(s) 98
BspFNI CGCG 1 cut(s) 123
BspHI TCATGA 1 cut(s) 909
BspLI GGNNCC 5 cut(s) 210, 445, 559, 705, 896
BspMI ACCTGC 3 cut(s) 310, 1139, 1210
BspPI GGATC 2 cut(s) 980, 998
BspT104I TTCGAA 1 cut(s) 1108
BspT107I GGYRCC 4 cut(s) 208, 443, 557, 703
BspTNI GGTCTC 1 cut(s) 1157
BsrDI GCAATG 4 cut(s) 389, 408, 786, 1137
BsrFI RCCGGY 1 cut(s) 196
BsrI ACTGG 2 cut(s) 405, 561
BssAI RCCGGY 1 cut(s) 196
BssECI CCNNGG 6 cut(s) 121, 190, 585, 974, 989, 1007
BssMI GATC 2 cut(s) 985, 1003
BssNI GRCGYC 1 cut(s) 109
BssT1I CCWWGG 3 cut(s) 585, 989, 1007
Bst2UI CCWGG 2 cut(s) 1053, 1157
Bst4CI ACNGT 3 cut(s) 242, 672, 835
Bst6I CTCTTC 1 cut(s) 1110
BstACI GRCGYC 1 cut(s) 109
BstAPI GCANNNNNTGC 2 cut(s) 479, 1279
BstBI TTCGAA 1 cut(s) 1108
BstDEI CTNAG 3 cut(s) 85, 1076, 1244
BstDSI CCRYGG 3 cut(s) 121, 585, 974
BstEII GGTNACC 1 cut(s) 1159
BstF5I GGATG 4 cut(s) 526, 952, 984, 1192
BstFNI CGCG 1 cut(s) 123
BstH2I RGCGCY 1 cut(s) 63
BstHHI GCGC 2 cut(s) 62, 1299
BstKTI GATC 2 cut(s) 988, 1006
BstMAI GTCTC 2 cut(s) 221, 1157
BstMBI GATC 2 cut(s) 985, 1003
BstMCI CGRYCG 1 cut(s) 135
BstNI CCWGG 2 cut(s) 1053, 1157
BstNSI RCATGY 2 cut(s) 545, 1273
BstPI GGTNACC 1 cut(s) 1159
BstSCI CCNGG 2 cut(s) 1051, 1155
BstSFI CTRYAG 1 cut(s) 632
BstSLI GKGCMC 1 cut(s) 708
BstUI CGCG 1 cut(s) 123
BstV1I GCAGC 3 cut(s) 388, 602, 986
BstV2I GAAGAC 2 cut(s) 276, 528
BsuI GTATCC 1 cut(s) 962
BsuRI GGCC 4 cut(s) 630, 650, 813, 1197
BtgI CCRYGG 3 cut(s) 121, 585, 974
BtsCI GGATG 4 cut(s) 526, 952, 984, 1192
BtsIMutI CAGTG 1 cut(s) 398
BveI ACCTGC 3 cut(s) 310, 1139, 1210
CciI TCATGA 1 cut(s) 909
CfoI GCGC 2 cut(s) 62, 1299
Cfr10I RCCGGY 1 cut(s) 196
Cfr13I GGNCC 3 cut(s) 118, 194, 628
Cfr42I CCGCGG 1 cut(s) 124
CpoI CGGWCCG 2 cut(s) 118, 194
CseI GACGC 2 cut(s) 117, 383
Csp6I GTAC 2 cut(s) 49, 444
CspI CGGWCCG 2 cut(s) 118, 194
CviQI GTAC 2 cut(s) 49, 444
DdeI CTNAG 3 cut(s) 85, 1076, 1244
DpnI GATC 2 cut(s) 987, 1005
DpnII GATC 2 cut(s) 985, 1003
DraI TTTAAA 1 cut(s) 676
EaeI YGGCCR 2 cut(s) 811, 1195
Eam1104I CTCTTC 1 cut(s) 1110
EarI CTCTTC 1 cut(s) 1110
Eco130I CCWWGG 3 cut(s) 585, 989, 1007
Eco31I GGTCTC 1 cut(s) 1157
Eco32I GATATC 1 cut(s) 820
Eco47I GGWCC 2 cut(s) 118, 194
Eco91I GGTNACC 1 cut(s) 1159
EcoO65I GGTNACC 1 cut(s) 1159
EcoRII CCWGG 2 cut(s) 1051, 1155
EcoRV GATATC 1 cut(s) 820
EcoT14I CCWWGG 3 cut(s) 585, 989, 1007
EcoT22I ATGCAT 1 cut(s) 1275
ErhI CCWWGG 3 cut(s) 585, 989, 1007
FalI AAGNNNNNCTT 4 cut(s) 692, 724, 807, 839
FauNDI CATATG 1 cut(s) 694
Fnu4HI GCNGC 5 cut(s) 124, 377, 492, 591, 1000
FokI GGATG 4 cut(s) 533, 959, 991, 1199
Fsp4HI GCNGC 5 cut(s) 124, 377, 492, 591, 1000
FspBI CTAG 2 cut(s) 569, 737
GlaI GCGC 2 cut(s) 61, 1298
GluI GCNGC 5 cut(s) 124, 377, 492, 591, 1000
GsuI CTGGAG 1 cut(s) 705
HaeII RGCGCY 1 cut(s) 63
HaeIII GGCC 4 cut(s) 630, 650, 813, 1197
HapII CCGG 1 cut(s) 197
HgaI GACGC 2 cut(s) 117, 383
HhaI GCGC 2 cut(s) 62, 1299
Hin1I GRCGYC 1 cut(s) 109
Hin6I GCGC 2 cut(s) 60, 1297
HinP1I GCGC 2 cut(s) 60, 1297
HincII GTYRAC 3 cut(s) 147, 406, 1092
HindII GTYRAC 3 cut(s) 147, 406, 1092
HinfI GANTC 5 cut(s) 214, 533, 689, 1102, 1240
HpaI GTTAAC 1 cut(s) 147
HpaII CCGG 1 cut(s) 197
HphI GGTGA 6 cut(s) 211, 341, 563, 941, 1049, 1153
Hpy166II GTNNAC 4 cut(s) 147, 398, 406, 1092
Hpy188I TCNGA 5 cut(s) 182, 194, 529, 668, 1287
Hpy188III TCNNGA 4 cut(s) 245, 256, 289, 910
Hpy8I GTNNAC 4 cut(s) 147, 398, 406, 1092
Hpy99I CGWCG 1 cut(s) 278
HpyAV CCTTC 6 cut(s) 73, 511, 542, 548, 718, 760
HpyCH4III ACNGT 3 cut(s) 242, 672, 835
HpyCH4IV ACGT 1 cut(s) 679
HpyCH4V TGCA 7 cut(s) 376, 413, 473, 482, 756, 1148, 1273
HpyF3I CTNAG 3 cut(s) 85, 1076, 1244
HpySE526I ACGT 1 cut(s) 679
Hsp92I GRCGYC 1 cut(s) 109
HspAI GCGC 2 cut(s) 60, 1297
KpnI GGTACC 1 cut(s) 447
KspAI GTTAAC 1 cut(s) 147
KspI CCGCGG 1 cut(s) 124
Kzo9I GATC 2 cut(s) 985, 1003
LmnI GCTCC 2 cut(s) 716, 751
Lsp1109I GCAGC 3 cut(s) 388, 602, 986
LweI GCATC 1 cut(s) 511
MaeI CTAG 2 cut(s) 569, 737
MaeII ACGT 1 cut(s) 679
MaeIII GTNAC 3 cut(s) 1115, 1159, 1265
MalI GATC 2 cut(s) 987, 1005
MboI GATC 2 cut(s) 985, 1003
MboII GAAGA 5 cut(s) 281, 528, 830, 859, 1097
MhlI GDGCHC 1 cut(s) 708
MlsI TGGCCA 2 cut(s) 813, 1197
MluCI AATT 3 cut(s) 324, 358, 594
MluNI TGGCCA 2 cut(s) 813, 1197
MlyI GAGTC 3 cut(s) 223, 542, 1096
MmeI TCCRAC 2 cut(s) 160, 808
MnlI CCTC 7 cut(s) 34, 133, 160, 200, 576, 937, 1293
Mox20I TGGCCA 2 cut(s) 813, 1197
Mph1103I ATGCAT 1 cut(s) 1275
MscI TGGCCA 2 cut(s) 813, 1197
MseI TTAA 4 cut(s) 146, 350, 675, 699
MslI CAYNNNNRTG 3 cut(s) 903, 914, 1166
Msp20I TGGCCA 2 cut(s) 813, 1197
MspA1I CMGCKG 1 cut(s) 123
MspI CCGG 1 cut(s) 197
MspR9I CCNGG 2 cut(s) 1053, 1157
MssI GTTTAAAC 1 cut(s) 676
Mva1269I GAATGC 1 cut(s) 53
MvaI CCWGG 2 cut(s) 1053, 1157
MvnI CGCG 1 cut(s) 123
NcoI CCATGG 1 cut(s) 585
NdeI CATATG 1 cut(s) 694
NdeII GATC 2 cut(s) 985, 1003
NlaIV GGNNCC 5 cut(s) 210, 445, 559, 705, 896
NmeAIII GCCGAG 1 cut(s) 237
NmuCI GTSAC 1 cut(s) 1159
NsiI ATGCAT 1 cut(s) 1275
NspI RCATGY 2 cut(s) 545, 1273
NspV TTCGAA 1 cut(s) 1108
OliI CACNNNNGTG 1 cut(s) 1166
PagI TCATGA 1 cut(s) 909
PciI ACATGT 1 cut(s) 541
PcsI WCGNNNNNNNCGW 1 cut(s) 676
PctI GAATGC 1 cut(s) 53
PfeI GAWTC 2 cut(s) 689, 1240
PkrI GCNGC 5 cut(s) 125, 378, 493, 592, 1001
PleI GAGTC 3 cut(s) 222, 541, 1096
PmeI GTTTAAAC 1 cut(s) 676
PpsI GAGTC 3 cut(s) 222, 541, 1096
PscI ACATGT 1 cut(s) 541
Psp6I CCWGG 2 cut(s) 1051, 1155
PspEI GGTNACC 1 cut(s) 1159
PspGI CCWGG 2 cut(s) 1051, 1155
PspN4I GGNNCC 5 cut(s) 210, 445, 559, 705, 896
PspPI GGNCC 3 cut(s) 118, 194, 628
RsaI GTAC 2 cut(s) 50, 445
RsaNI GTAC 2 cut(s) 49, 444
RseI CAYNNNNRTG 3 cut(s) 903, 914, 1166
Rsr2I CGGWCCG 2 cut(s) 118, 194
RsrII CGGWCCG 2 cut(s) 118, 194
SacII CCGCGG 1 cut(s) 124
SaqAI TTAA 4 cut(s) 146, 350, 675, 699
SatI GCNGC 5 cut(s) 124, 377, 492, 591, 1000
Sau3AI GATC 2 cut(s) 985, 1003
Sau96I GGNCC 3 cut(s) 118, 194, 628
SchI GAGTC 3 cut(s) 223, 542, 1096
ScrFI CCNGG 2 cut(s) 1053, 1157
SduI GDGCHC 1 cut(s) 708
SfaNI GCATC 1 cut(s) 511
SfcI CTRYAG 1 cut(s) 632
Sfr303I CCGCGG 1 cut(s) 124
SfuI TTCGAA 1 cut(s) 1108
SgrBI CCGCGG 1 cut(s) 124
SinI GGWCC 2 cut(s) 118, 194
SmiMI CAYNNNNRTG 3 cut(s) 903, 914, 1166
Sse9I AATT 3 cut(s) 324, 358, 594
SsiI CCGC 5 cut(s) 116, 121, 123, 126, 491
SspMI CTAG 2 cut(s) 569, 737
StyD4I CCNGG 2 cut(s) 1051, 1155
StyI CCWWGG 3 cut(s) 585, 989, 1007
TaaI ACNGT 3 cut(s) 242, 672, 835
TaiI ACGT 1 cut(s) 682
TaqI TCGA 2 cut(s) 288, 1108
TaqII GACCGA 1 cut(s) 121
TasI AATT 3 cut(s) 324, 358, 594
TauI GCSGC 2 cut(s) 126, 494
TfiI GAWTC 2 cut(s) 689, 1240
Tru1I TTAA 4 cut(s) 146, 350, 675, 699
Tru9I TTAA 4 cut(s) 146, 350, 675, 699
TscAI CASTG 1 cut(s) 405
TseFI GTSAC 1 cut(s) 1159
TseI GCWGC 3 cut(s) 376, 590, 999
Tsp45I GTSAC 1 cut(s) 1159
TspDTI ATGAA 3 cut(s) 17, 606, 714
TspGWI ACGGA 1 cut(s) 991
TspRI CASTG 1 cut(s) 405
VpaK11BI GGWCC 2 cut(s) 118, 194
XceI RCATGY 2 cut(s) 545, 1273
XcmI CCANNNNNNNNNTGG 1 cut(s) 568
XspI CTAG 2 cut(s) 569, 737
Zsp2I ATGCAT 1 cut(s) 1275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.