Rh1CG243500

Signal peptide peptidase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Forward (+)
50436103 .. 50440423
4321 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG243500.1

Sequence Viewer

Length: 1179 bp
ATGAAAACCGAAAGTACTGGTGAGGAGAGCAAGTCGGCGGCGGCGAACGCACGTTCCCCAGACCAAGCGTCGGCGAGGCTCCGGTCGGTAAAGGTCCGGACTTGGATCAGCGGTGTAGAAGCCAACGAGTATGTTGGTGTCGGGGCTCGATTTGGACCTACCCTGGAATCAAAGGAGAAGCATGCCAATAATACTAGAGTGGTTCTGGCAGACCCCCCTGATTGTTGTACCAAACCCAAGAATAAGGTCATTTTGGTACACCGAGGAAATTGCAGTTTTACCACCAAGGCAAATATGGCTGAATCTGCTAATGCTTCAGCCATCCTCATCATAAATAACCGTCCAGAACTTTTCAAGATGGTTTGTGAAGACGACGAGCCTGATGTCGAGATAGGCATACCTGCTGTTATGCTTCCCAACAAAATTGGTGAAATCTTGGAAAATGGATTAACGAACAATTCCATAGTTTCTGTGCAGCTATACTCTCCATTGCGTCCACTGGTTGACATTGCAGAAGTTGCTTCTGACGAGTCTTCACATGTGGAAGGTGAAGGTGCCAGTCCTCTAGTGGAGATTAGCACCATGGCAGCAATTCTCTTTGTTGTGATTGCTTCATGCTTCTTGGTTATGTTTTACAAACTTATGTCCTTCTGGTTCATCGAGATTCTGGTGGTTTTGTTTTGCATTGGTGGGATAGAGGTTGGAACAGTTCTTCTCGGTTGTGCCATTTTTTATGACATCTTCTGGGTATTTGTTTCTAAATGGTGGTTCCATGAGAGTGTCATGATAGTGGTGGCTCGTGGTGATAAAAGTGGAGAGGATGGTATCCCAATGCTACTAAAAATCCCACGGATGTTTGATCCTTGGGGTGGCTACAGCATCATCGGGTTTGGTGATATTATCTTACCTGGATTGGTTGTAGCCTTTTCACTAAGGTATGATTGGTTGACAAATAAGACTCTTCGAACGGGTTACTTTGTGTGGGCAATGACAGCTTATGGTGCAGGTCTCCTGGTCACCTATGTGGCTTTGAACTTGATGGATGGACATGGCCAACCCGCTTTGTTATACATAGTTCCATTCACACTTGGTACCTTCTTAACCTTGGGACAGATGAGAGGTGACCTCAAAGTTCTGTGGACAAGAGGAGAACCTGAGAGGCCTTGCCCGCACGTATGA

Protein Analysis

392

Amino Acids

43.08

Weight (kDa)

5.39

Isoelectric Point (pI)

34.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PA PF02225 73 - 146 2.7e-12 PA domain
Peptidase_A22B PF04258 189 - 233 6e-06 Signal peptide peptidase
Peptidase_A22B PF04258 232 - 384 4.7e-65 Signal peptide peptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 409, 995
Acc65I GGTACC 1 cut(s) 1091
AccB1I GGYRCC 2 cut(s) 554, 1091
AccIII TCCGGA 1 cut(s) 96
AciI CCGC 5 cut(s) 38, 41, 111, 1059, 1169
AclWI GGATC 2 cut(s) 113, 854
AcoI YGGCCR 1 cut(s) 1051
AcuI CTGAAG 1 cut(s) 300
AfaI GTAC 4 cut(s) 16, 229, 258, 1093
AfiI CCNNNNNNNGG 2 cut(s) 70, 869
AflIII ACRYGT 1 cut(s) 538
AgsI TTSAA 2 cut(s) 355, 1033
AhdI GACNNNNNGTC 1 cut(s) 67
AjnI CCWGG 3 cut(s) 162, 907, 1011
AleI CACNNNNGTG 1 cut(s) 1022
AloI GAACNNNNNNTCC 2 cut(s) 38, 70
AluBI AGCT 2 cut(s) 478, 995
AluI AGCT 2 cut(s) 478, 995
Alw26I GTCTC 1 cut(s) 1013
AlwI GGATC 2 cut(s) 113, 854
Aor13HI TCCGGA 1 cut(s) 96
AoxI GGCC 2 cut(s) 1051, 1160
ApeKI GCWGC 2 cut(s) 475, 587
Asp718I GGTACC 1 cut(s) 1091
AspS9I GGNCC 2 cut(s) 94, 155
AsuHPI GGTGA 7 cut(s) 32, 440, 560, 815, 905, 1009, 1133
AsuII TTCGAA 1 cut(s) 964
AvaII GGWCC 2 cut(s) 94, 155
BalI TGGCCA 1 cut(s) 1053
BanI GGYRCC 2 cut(s) 554, 1091
BanII GRGCYC 1 cut(s) 148
BauI CACGAG 1 cut(s) 798
BbsI GAAGAC 2 cut(s) 375, 525
BbvI GCAGC 2 cut(s) 487, 599
BccI CCATC 5 cut(s) 329, 352, 815, 1033, 1037
BcgI CGANNNNNNTGC 2 cut(s) 252, 286
BciT130I CCWGG 3 cut(s) 164, 909, 1013
BciVI GTATCC 1 cut(s) 836
BcoDI GTCTC 1 cut(s) 1013
BfaI CTAG 2 cut(s) 195, 566
BfmI CTRYAG 1 cut(s) 874
BfuAI ACCTGC 2 cut(s) 409, 995
BfuI GTATCC 1 cut(s) 836
BisI GCNGC 4 cut(s) 39, 42, 476, 588
BlsI GCNGC 4 cut(s) 40, 43, 477, 589
BmcAI AGTACT 1 cut(s) 16
Bme1390I CCNGG 3 cut(s) 164, 909, 1013
Bme18I GGWCC 2 cut(s) 94, 155
BmeRI GACNNNNNGTC 1 cut(s) 67
BmgT120I GGNCC 2 cut(s) 94, 155
BmiI GGNNCC 4 cut(s) 80, 556, 770, 1093
BmrFI CCNGG 3 cut(s) 164, 909, 1013
BmsI GCATC 1 cut(s) 888
BpiI GAAGAC 2 cut(s) 375, 525
BplI GAGNNNNNCTC 2 cut(s) 1110, 1142
Bpu14I TTCGAA 1 cut(s) 964
BsaAI YACGTR 1 cut(s) 1174
BsaI GGTCTC 1 cut(s) 1013
BsaJI CCNNGG 7 cut(s) 162, 262, 285, 582, 848, 863, 1104
BsaWI WCCGGW 2 cut(s) 81, 96
BsaXI ACNNNNNCTCC 2 cut(s) 17, 47
Bsc4I CCNNNNNNNGG 2 cut(s) 70, 869
Bse1I ACTGG 3 cut(s) 22, 504, 558
Bse3DI GCAATG 3 cut(s) 488, 507, 993
BseAI TCCGGA 1 cut(s) 96
BseBI CCWGG 3 cut(s) 164, 909, 1013
BseDI CCNNGG 7 cut(s) 162, 262, 285, 582, 848, 863, 1104
BseGI GGATG 4 cut(s) 321, 826, 858, 1048
BseLI CCNNNNNNNGG 2 cut(s) 70, 869
BseMI GCAATG 3 cut(s) 488, 507, 993
BseMII CTCAG 1 cut(s) 1146
BseNI ACTGG 3 cut(s) 22, 504, 558
BseRI GAGGAG 2 cut(s) 38, 1161
BseXI GCAGC 2 cut(s) 487, 599
BsgI GTGCAG 2 cut(s) 494, 1023
Bsh1285I CGRYCG 1 cut(s) 86
BshFI GGCC 2 cut(s) 1053, 1162
BshNI GGYRCC 2 cut(s) 554, 1091
BsiEI CGRYCG 1 cut(s) 86
BsiSI CCGG 2 cut(s) 82, 97
BslFI GGGAC 1 cut(s) 1122
BslI CCNNNNNNNGG 2 cut(s) 70, 869
BsmAI GTCTC 1 cut(s) 1013
BsmFI GGGAC 1 cut(s) 1122
BsnI GGCC 2 cut(s) 1053, 1162
Bso31I GGTCTC 1 cut(s) 1013
Bsp119I TTCGAA 1 cut(s) 964
Bsp1286I GDGCHC 1 cut(s) 148
Bsp13I TCCGGA 1 cut(s) 96
Bsp143I GATC 2 cut(s) 105, 859
Bsp19I CCATGG 1 cut(s) 582
BspACI CCGC 5 cut(s) 38, 41, 111, 1059, 1169
BspANI GGCC 2 cut(s) 1053, 1162
BspCNI CTCAG 1 cut(s) 1147
BspEI TCCGGA 1 cut(s) 96
BspHI TCATGA 1 cut(s) 783
BspLI GGNNCC 4 cut(s) 80, 556, 770, 1093
BspMI ACCTGC 2 cut(s) 409, 995
BspPI GGATC 2 cut(s) 113, 854
BspT104I TTCGAA 1 cut(s) 964
BspT107I GGYRCC 2 cut(s) 554, 1091
BspTNI GGTCTC 1 cut(s) 1013
BsrDI GCAATG 3 cut(s) 488, 507, 993
BsrI ACTGG 3 cut(s) 22, 504, 558
BssECI CCNNGG 7 cut(s) 162, 262, 285, 582, 848, 863, 1104
BssMI GATC 2 cut(s) 105, 859
BssSI CACGAG 1 cut(s) 798
BssT1I CCWWGG 4 cut(s) 285, 582, 863, 1104
Bst2BI CACGAG 1 cut(s) 798
Bst2UI CCWGG 3 cut(s) 164, 909, 1013
Bst4CI ACNGT 2 cut(s) 341, 709
Bst6I CTCTTC 1 cut(s) 966
BstAPI GCANNNNNTGC 1 cut(s) 518
BstBAI YACGTR 1 cut(s) 1174
BstBI TTCGAA 1 cut(s) 964
BstC8I GCNNGC 2 cut(s) 183, 1169
BstDEI CTNAG 2 cut(s) 932, 1155
BstDSI CCRYGG 2 cut(s) 582, 848
BstEII GGTNACC 2 cut(s) 1015, 1121
BstF5I GGATG 4 cut(s) 321, 826, 858, 1048
BstKTI GATC 2 cut(s) 108, 862
BstMAI GTCTC 1 cut(s) 1013
BstMBI GATC 2 cut(s) 105, 859
BstMCI CGRYCG 1 cut(s) 86
BstMWI GCNNNNNNNGC 7 cut(s) 47, 296, 305, 518, 992, 1001, 1168
BstNI CCWGG 3 cut(s) 164, 909, 1013
BstNSI RCATGY 2 cut(s) 185, 542
BstPI GGTNACC 2 cut(s) 1015, 1121
BstSCI CCNGG 3 cut(s) 162, 907, 1011
BstSFI CTRYAG 1 cut(s) 874
BstV1I GCAGC 2 cut(s) 487, 599
BstV2I GAAGAC 2 cut(s) 375, 525
BsuI GTATCC 1 cut(s) 836
BsuRI GGCC 2 cut(s) 1053, 1162
BtgI CCRYGG 2 cut(s) 582, 848
BtsCI GGATG 4 cut(s) 321, 826, 858, 1048
BtsIMutI CAGTG 1 cut(s) 497
BveI ACCTGC 2 cut(s) 409, 995
Cac8I GCNNGC 2 cut(s) 183, 1169
CciI TCATGA 1 cut(s) 783
Cfr13I GGNCC 2 cut(s) 94, 155
CseI GACGC 2 cut(s) 57, 482
Csp6I GTAC 4 cut(s) 15, 228, 257, 1092
CviAII CATG 7 cut(s) 182, 539, 583, 615, 773, 784, 1049
CviQI GTAC 4 cut(s) 15, 228, 257, 1092
DdeI CTNAG 2 cut(s) 932, 1155
DpnI GATC 2 cut(s) 107, 861
DpnII GATC 2 cut(s) 105, 859
DriI GACNNNNNGTC 1 cut(s) 67
EaeI YGGCCR 1 cut(s) 1051
Eam1104I CTCTTC 1 cut(s) 966
Eam1105I GACNNNNNGTC 1 cut(s) 67
EarI CTCTTC 1 cut(s) 966
Eco130I CCWWGG 4 cut(s) 285, 582, 863, 1104
Eco147I AGGCCT 1 cut(s) 1162
Eco24I GRGCYC 1 cut(s) 148
Eco31I GGTCTC 1 cut(s) 1013
Eco47I GGWCC 2 cut(s) 94, 155
Eco57I CTGAAG 1 cut(s) 300
Eco91I GGTNACC 2 cut(s) 1015, 1121
EcoO65I GGTNACC 2 cut(s) 1015, 1121
EcoRII CCWGG 3 cut(s) 162, 907, 1011
EcoT14I CCWWGG 4 cut(s) 285, 582, 863, 1104
EcoT38I GRGCYC 1 cut(s) 148
ErhI CCWWGG 4 cut(s) 285, 582, 863, 1104
FaeI CATG 7 cut(s) 185, 542, 586, 618, 776, 787, 1052
FaqI GGGAC 1 cut(s) 1122
FatI CATG 7 cut(s) 181, 538, 582, 614, 772, 783, 1048
FauI CCCGC 2 cut(s) 1066, 1176
Fnu4HI GCNGC 4 cut(s) 39, 42, 476, 588
FokI GGATG 4 cut(s) 308, 833, 865, 1055
FriOI GRGCYC 1 cut(s) 148
Fsp4HI GCNGC 4 cut(s) 39, 42, 476, 588
FspBI CTAG 2 cut(s) 195, 566
GluI GCNGC 4 cut(s) 39, 42, 476, 588
HaeIII GGCC 2 cut(s) 1053, 1162
HapII CCGG 2 cut(s) 82, 97
HgaI GACGC 2 cut(s) 57, 482
Hin1II CATG 7 cut(s) 185, 542, 586, 618, 776, 787, 1052
HincII GTYRAC 2 cut(s) 505, 948
HindII GTYRAC 2 cut(s) 505, 948
HinfI GANTC 5 cut(s) 167, 302, 530, 664, 958
HpaII CCGG 2 cut(s) 82, 97
HphI GGTGA 7 cut(s) 32, 440, 560, 815, 905, 1009, 1133
Hpy166II GTNNAC 5 cut(s) 259, 497, 505, 948, 1140
Hpy188I TCNGA 1 cut(s) 526
Hpy188III TCNNGA 6 cut(s) 97, 344, 355, 388, 661, 784
Hpy8I GTNNAC 5 cut(s) 259, 497, 505, 948, 1140
Hpy99I CGWCG 2 cut(s) 73, 377
HpyAV CCTTC 4 cut(s) 539, 545, 658, 1105
HpyCH4III ACNGT 2 cut(s) 341, 709
HpyCH4IV ACGT 2 cut(s) 52, 1173
HpyCH4V TGCA 5 cut(s) 273, 475, 512, 684, 1004
HpyF10VI GCNNNNNNNGC 7 cut(s) 47, 296, 305, 518, 992, 1001, 1168
HpyF3I CTNAG 2 cut(s) 932, 1155
HpySE526I ACGT 2 cut(s) 52, 1173
Hsp92II CATG 7 cut(s) 185, 542, 586, 618, 776, 787, 1052
Kpn2I TCCGGA 1 cut(s) 96
KpnI GGTACC 1 cut(s) 1095
Kzo9I GATC 2 cut(s) 105, 859
LmnI GCTCC 1 cut(s) 84
Lsp1109I GCAGC 2 cut(s) 487, 599
LweI GCATC 1 cut(s) 888
MaeI CTAG 2 cut(s) 195, 566
MaeII ACGT 2 cut(s) 52, 1173
MaeIII GTNAC 3 cut(s) 971, 1015, 1121
MalI GATC 2 cut(s) 107, 861
MboI GATC 2 cut(s) 105, 859
MboII GAAGA 5 cut(s) 380, 525, 704, 733, 953
MhlI GDGCHC 1 cut(s) 148
MlsI TGGCCA 1 cut(s) 1053
MluCI AATT 4 cut(s) 268, 423, 457, 591
MluNI TGGCCA 1 cut(s) 1053
MlyI GAGTC 2 cut(s) 539, 952
MmeI TCCRAC 1 cut(s) 682
Mox20I TGGCCA 1 cut(s) 1053
MroI TCCGGA 1 cut(s) 96
MscI TGGCCA 1 cut(s) 1053
MseI TTAA 2 cut(s) 449, 1100
MslI CAYNNNNRTG 3 cut(s) 777, 788, 1022
Msp20I TGGCCA 1 cut(s) 1053
MspA1I CMGCKG 1 cut(s) 111
MspI CCGG 2 cut(s) 82, 97
MspR9I CCNGG 3 cut(s) 164, 909, 1013
MvaI CCWGG 3 cut(s) 164, 909, 1013
MwoI GCNNNNNNNGC 7 cut(s) 47, 296, 305, 518, 992, 1001, 1168
NcoI CCATGG 1 cut(s) 582
NdeII GATC 2 cut(s) 105, 859
NlaIII CATG 7 cut(s) 185, 542, 586, 618, 776, 787, 1052
NlaIV GGNNCC 4 cut(s) 80, 556, 770, 1093
NmuCI GTSAC 2 cut(s) 1015, 1121
NspI RCATGY 2 cut(s) 185, 542
NspV TTCGAA 1 cut(s) 964
OliI CACNNNNGTG 1 cut(s) 1022
PaeI GCATGC 1 cut(s) 185
PagI TCATGA 1 cut(s) 783
PceI AGGCCT 1 cut(s) 1162
PciI ACATGT 1 cut(s) 538
PcsI WCGNNNNNNNCGW 1 cut(s) 41
PfeI GAWTC 3 cut(s) 167, 302, 664
PkrI GCNGC 4 cut(s) 40, 43, 477, 589
PleI GAGTC 2 cut(s) 538, 952
PpsI GAGTC 2 cut(s) 538, 952
Ppu21I YACGTR 1 cut(s) 1174
PscI ACATGT 1 cut(s) 538
Psp6I CCWGG 3 cut(s) 162, 907, 1011
PspEI GGTNACC 2 cut(s) 1015, 1121
PspGI CCWGG 3 cut(s) 162, 907, 1011
PspN4I GGNNCC 4 cut(s) 80, 556, 770, 1093
PspPI GGNCC 2 cut(s) 94, 155
RsaI GTAC 4 cut(s) 16, 229, 258, 1093
RsaNI GTAC 4 cut(s) 15, 228, 257, 1092
RseI CAYNNNNRTG 3 cut(s) 777, 788, 1022
SaqAI TTAA 2 cut(s) 449, 1100
SatI GCNGC 4 cut(s) 39, 42, 476, 588
Sau3AI GATC 2 cut(s) 105, 859
Sau96I GGNCC 2 cut(s) 94, 155
ScaI AGTACT 1 cut(s) 16
SchI GAGTC 2 cut(s) 539, 952
ScrFI CCNGG 3 cut(s) 164, 909, 1013
SduI GDGCHC 1 cut(s) 148
SfaNI GCATC 1 cut(s) 888
SfcI CTRYAG 1 cut(s) 874
SfuI TTCGAA 1 cut(s) 964
SinI GGWCC 2 cut(s) 94, 155
SmiMI CAYNNNNRTG 3 cut(s) 777, 788, 1022
SphI GCATGC 1 cut(s) 185
Sse9I AATT 4 cut(s) 268, 423, 457, 591
SseBI AGGCCT 1 cut(s) 1162
SsiI CCGC 5 cut(s) 38, 41, 111, 1059, 1169
SspMI CTAG 2 cut(s) 195, 566
StuI AGGCCT 1 cut(s) 1162
StyD4I CCNGG 3 cut(s) 162, 907, 1011
StyI CCWWGG 4 cut(s) 285, 582, 863, 1104
TaaI ACNGT 2 cut(s) 341, 709
TaiI ACGT 2 cut(s) 55, 1176
TaqI TCGA 4 cut(s) 148, 387, 660, 964
TasI AATT 4 cut(s) 268, 423, 457, 591
TatI WGTACW 1 cut(s) 14
TauI GCSGC 2 cut(s) 41, 44
TfiI GAWTC 3 cut(s) 167, 302, 664
Tru1I TTAA 2 cut(s) 449, 1100
Tru9I TTAA 2 cut(s) 449, 1100
TscAI CASTG 1 cut(s) 504
TseFI GTSAC 2 cut(s) 1015, 1121
TseI GCWGC 2 cut(s) 475, 587
Tsp45I GTSAC 2 cut(s) 1015, 1121
TspDTI ATGAA 3 cut(s) 17, 603, 646
TspGWI ACGGA 1 cut(s) 865
TspRI CASTG 1 cut(s) 504
VpaK11BI GGWCC 2 cut(s) 94, 155
XceI RCATGY 2 cut(s) 185, 542
XcmI CCANNNNNNNNNTGG 2 cut(s) 292, 565
XspI CTAG 2 cut(s) 195, 566
ZrmI AGTACT 1 cut(s) 16
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.