Rh1AG259800

Signal peptide peptidase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Forward (+)
48009576 .. 48014674
5099 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG259800.1

Sequence Viewer

Length: 1263 bp
ATGGCTGAATCTGCTAATGCTTCAGCCATCCTCATCATAAATAACCGTCCAGAACTTTTCAAGATGGTTTGTGAAGACGACGAGCCTGATGTCGAGATAGGCATACCTGCTGTTATGCTTCCCAACAAAATTGGTGAAATCTTGGAAAATGGATTAACGAACAATTCCATAGTTTCTGTGCAGCTATACTCTCCATTGCGTCCACTGGTTGATATTGCAGAAGTATTTTTATGGCTTATGGCTGTTGGTACCATCTTATTTGCTTCTTATTGGTCTGCATGGACTGCAAGAGAAGCAGCTATTGAGCATGACAAGCTATTGAAGGATGCTTCTGACGAGTCTTCACATGTGGAAGGTGGAAGTGCTGGTCCTCTAGTGGAGATTAGCACCATGGCAGCAATTCTCTTTGTTGTGATTGCTTCATGCTTCTTGGTTATGTTTTACAAACTTATGTCCTTCTGGTTCATTGAGATTCTGGTGGTTTTGTTTTGCATTGGTGGGATAGAGGGCCTACAGACTTGCTTGGTGGCCTTGCTATCATGTTTCAGACGGTTTAAACGTGCTGGAGAATCATATGTTAAGGTGCCCTTCTTTGGAGCTGTTTCATATTTGACACTAGCTGTCGCTCCCTTCTGCATAGCATTTGCTGTTGTTTGGGCAGTGAATCGCCGTGTGTCATTTGCTTGGATTGGCCAAGATATCCTTGGTATTGCACTGATAATCACCGTTCTTCAGATTGTTCGCGTACCAAATCTCAAGGTTGGAACAGTTCTTCTCGGTTGTGCCTTTTTTTATGACATCTTCTGGGTATTTGTTTCTAAATGGTGGTTCCATGAGAGTGTCATGATAGTGGTGGCTCGTGGTGATAAAAGTGGAGAGGATGGTATCCCAATGCTACTAAAAATCCTACGGATGTTTGATCCTTGGGGTGGCTACAGCATCATCGGGTTTGGTGATATTATCTTACCTGGATTGGTTGTAGCCTTTTCACTAAGGTATGATTGGTTGACAAAGAAGACTCTTCGAACGGGTTACTTTGTGTGGGCAATGACAGCTTATGGTGCAGGTCTCCTGGTCACCTATGTGGCTTTGAACTTGATGGATGGACATGGCCAACCTGCTTTGTTATACATAGTTCCATTCAAACTTGGTACTTTCTTAACCTTGGGACAGATGAGAGGTGACCTCAAAGTTCTGTGGACAAGAGGAGAACCAGAGAGGCCTTGCCCGCACGTACGACTCCAATCCTCTCACTCTCAATAG

Protein Analysis

420

Amino Acids

46.67

Weight (kDa)

5.92

Isoelectric Point (pI)

39.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_A22B PF04258 126 - 404 5.8e-100 Signal peptide peptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 115, 1055, 1126
Acc65I GGTACC 1 cut(s) 248
AccB1I GGYRCC 2 cut(s) 248, 583
AccII CGCG 1 cut(s) 744
AciI CCGC 1 cut(s) 1229
AclWI GGATC 1 cut(s) 914
AcoI YGGCCR 2 cut(s) 691, 1111
AcuI CTGAAG 2 cut(s) 6, 716
AfaI GTAC 4 cut(s) 250, 747, 1153, 1236
AfiI CCNNNNNNNGG 2 cut(s) 593, 929
AflIII ACRYGT 1 cut(s) 346
AgsI TTSAA 4 cut(s) 61, 322, 1093, 1144
AjnI CCWGG 2 cut(s) 967, 1071
AleI CACNNNNGTG 1 cut(s) 1082
AluBI AGCT 6 cut(s) 184, 299, 316, 599, 620, 1055
AluI AGCT 6 cut(s) 184, 299, 316, 599, 620, 1055
Alw26I GTCTC 1 cut(s) 1073
AlwI GGATC 1 cut(s) 914
AoxI GGCC 5 cut(s) 508, 528, 691, 1111, 1220
ApeKI GCWGC 3 cut(s) 181, 296, 395
Asp718I GGTACC 1 cut(s) 248
AspS9I GGNCC 2 cut(s) 368, 508
AsuHPI GGTGA 6 cut(s) 146, 715, 875, 965, 1069, 1193
AsuII TTCGAA 1 cut(s) 1024
AvaII GGWCC 1 cut(s) 368
BaeGI GKGCMC 1 cut(s) 588
BalI TGGCCA 2 cut(s) 693, 1113
BanI GGYRCC 2 cut(s) 248, 583
BauI CACGAG 1 cut(s) 858
BbsI GAAGAC 3 cut(s) 81, 333, 1022
BbvI GCAGC 3 cut(s) 193, 308, 407
BccI CCATC 6 cut(s) 35, 58, 260, 875, 1093, 1097
BceAI ACGGC 1 cut(s) 654
BciT130I CCWGG 2 cut(s) 969, 1073
BciVI GTATCC 1 cut(s) 896
BcoDI GTCTC 1 cut(s) 1073
BfaI CTAG 2 cut(s) 374, 617
BfmI CTRYAG 2 cut(s) 512, 934
BfuAI ACCTGC 3 cut(s) 115, 1055, 1126
BfuI GTATCC 1 cut(s) 896
BisI GCNGC 3 cut(s) 182, 297, 396
BlsI GCNGC 3 cut(s) 183, 298, 397
Bme1390I CCNGG 2 cut(s) 969, 1073
Bme18I GGWCC 1 cut(s) 368
BmgT120I GGNCC 2 cut(s) 368, 508
BmiI GGNNCC 3 cut(s) 250, 585, 830
BmrFI CCNGG 2 cut(s) 969, 1073
BmsI GCATC 2 cut(s) 316, 948
BpiI GAAGAC 3 cut(s) 81, 333, 1022
BplI GAGNNNNNCTC 2 cut(s) 1170, 1202
BpmI CTGGAG 1 cut(s) 585
Bpu14I TTCGAA 1 cut(s) 1024
BpuEI CTTGAG 1 cut(s) 740
BsaAI YACGTR 1 cut(s) 1234
BsaI GGTCTC 1 cut(s) 1073
BsaJI CCNNGG 4 cut(s) 390, 703, 923, 1164
Bsc4I CCNNNNNNNGG 2 cut(s) 593, 929
Bse1I ACTGG 1 cut(s) 210
Bse3DI GCAATG 2 cut(s) 194, 1053
BseBI CCWGG 2 cut(s) 969, 1073
BseDI CCNNGG 4 cut(s) 390, 703, 923, 1164
BseGI GGATG 5 cut(s) 27, 331, 886, 918, 1108
BseLI CCNNNNNNNGG 2 cut(s) 593, 929
BseMI GCAATG 2 cut(s) 194, 1053
BseNI ACTGG 1 cut(s) 210
BseRI GAGGAG 1 cut(s) 1221
BseSI GKGCMC 1 cut(s) 588
BseXI GCAGC 3 cut(s) 193, 308, 407
BsgI GTGCAG 2 cut(s) 200, 1083
Bsh1236I CGCG 1 cut(s) 744
BshFI GGCC 5 cut(s) 510, 530, 693, 1113, 1222
BshNI GGYRCC 2 cut(s) 248, 583
BsiWI CGTACG 1 cut(s) 1234
BslFI GGGAC 1 cut(s) 1182
BslI CCNNNNNNNGG 2 cut(s) 593, 929
BsmAI GTCTC 1 cut(s) 1073
BsmFI GGGAC 1 cut(s) 1182
BsnI GGCC 5 cut(s) 510, 530, 693, 1113, 1222
Bso31I GGTCTC 1 cut(s) 1073
Bsp119I TTCGAA 1 cut(s) 1024
Bsp1286I GDGCHC 1 cut(s) 588
Bsp143I GATC 1 cut(s) 919
Bsp19I CCATGG 1 cut(s) 390
BspACI CCGC 1 cut(s) 1229
BspANI GGCC 5 cut(s) 510, 530, 693, 1113, 1222
BspFNI CGCG 1 cut(s) 744
BspHI TCATGA 1 cut(s) 843
BspLI GGNNCC 3 cut(s) 250, 585, 830
BspMI ACCTGC 3 cut(s) 115, 1055, 1126
BspPI GGATC 1 cut(s) 914
BspT104I TTCGAA 1 cut(s) 1024
BspT107I GGYRCC 2 cut(s) 248, 583
BspTNI GGTCTC 1 cut(s) 1073
BsrDI GCAATG 2 cut(s) 194, 1053
BsrI ACTGG 1 cut(s) 210
BssECI CCNNGG 4 cut(s) 390, 703, 923, 1164
BssMI GATC 1 cut(s) 919
BssSI CACGAG 1 cut(s) 858
BssT1I CCWWGG 4 cut(s) 390, 703, 923, 1164
Bst2BI CACGAG 1 cut(s) 858
Bst2UI CCWGG 2 cut(s) 969, 1073
Bst4CI ACNGT 4 cut(s) 47, 552, 727, 769
Bst6I CTCTTC 1 cut(s) 1026
BstAPI GCANNNNNTGC 1 cut(s) 284
BstBAI YACGTR 1 cut(s) 1234
BstBI TTCGAA 1 cut(s) 1024
BstC8I GCNNGC 1 cut(s) 1229
BstDEI CTNAG 1 cut(s) 992
BstDSI CCRYGG 1 cut(s) 390
BstEII GGTNACC 2 cut(s) 1075, 1181
BstF5I GGATG 5 cut(s) 27, 331, 886, 918, 1108
BstFNI CGCG 1 cut(s) 744
BstKTI GATC 1 cut(s) 922
BstMAI GTCTC 1 cut(s) 1073
BstMBI GATC 1 cut(s) 919
BstMWI GCNNNNNNNGC 7 cut(s) 11, 284, 293, 313, 1052, 1061, 1228
BstNI CCWGG 2 cut(s) 969, 1073
BstNSI RCATGY 1 cut(s) 350
BstPI GGTNACC 2 cut(s) 1075, 1181
BstSCI CCNGG 2 cut(s) 967, 1071
BstSFI CTRYAG 2 cut(s) 512, 934
BstSLI GKGCMC 1 cut(s) 588
BstUI CGCG 1 cut(s) 744
BstV1I GCAGC 3 cut(s) 193, 308, 407
BstV2I GAAGAC 3 cut(s) 81, 333, 1022
BsuI GTATCC 1 cut(s) 896
BsuRI GGCC 5 cut(s) 510, 530, 693, 1113, 1222
BtgI CCRYGG 1 cut(s) 390
BtsCI GGATG 5 cut(s) 27, 331, 886, 918, 1108
BtsI GCAGTG 1 cut(s) 666
BtsIMutI CAGTG 3 cut(s) 203, 666, 713
BveI ACCTGC 3 cut(s) 115, 1055, 1126
Cac8I GCNNGC 1 cut(s) 1229
CciI TCATGA 1 cut(s) 843
Cfr13I GGNCC 2 cut(s) 368, 508
CseI GACGC 1 cut(s) 188
Csp6I GTAC 4 cut(s) 249, 746, 1152, 1235
CviAII CATG 9 cut(s) 279, 308, 347, 391, 423, 540, 833, 844, 1109
CviQI GTAC 4 cut(s) 249, 746, 1152, 1235
DdeI CTNAG 1 cut(s) 992
DpnI GATC 1 cut(s) 921
DpnII GATC 1 cut(s) 919
DraI TTTAAA 1 cut(s) 556
EaeI YGGCCR 2 cut(s) 691, 1111
Eam1104I CTCTTC 1 cut(s) 1026
EarI CTCTTC 1 cut(s) 1026
Eco130I CCWWGG 4 cut(s) 390, 703, 923, 1164
Eco147I AGGCCT 1 cut(s) 1222
Eco31I GGTCTC 1 cut(s) 1073
Eco32I GATATC 1 cut(s) 700
Eco47I GGWCC 1 cut(s) 368
Eco57I CTGAAG 2 cut(s) 6, 716
Eco91I GGTNACC 2 cut(s) 1075, 1181
EcoO109I RGGNCCY 1 cut(s) 508
EcoO65I GGTNACC 2 cut(s) 1075, 1181
EcoRII CCWGG 2 cut(s) 967, 1071
EcoRV GATATC 1 cut(s) 700
EcoT14I CCWWGG 4 cut(s) 390, 703, 923, 1164
ErhI CCWWGG 4 cut(s) 390, 703, 923, 1164
FaeI CATG 9 cut(s) 282, 311, 350, 394, 426, 543, 836, 847, 1112
FalI AAGNNNNNCTT 4 cut(s) 572, 604, 687, 719
FaqI GGGAC 1 cut(s) 1182
FatI CATG 9 cut(s) 278, 307, 346, 390, 422, 539, 832, 843, 1108
FauI CCCGC 1 cut(s) 1236
FauNDI CATATG 1 cut(s) 574
Fnu4HI GCNGC 3 cut(s) 182, 297, 396
FokI GGATG 5 cut(s) 14, 338, 893, 925, 1115
Fsp4HI GCNGC 3 cut(s) 182, 297, 396
FspBI CTAG 2 cut(s) 374, 617
GluI GCNGC 3 cut(s) 182, 297, 396
GsuI CTGGAG 1 cut(s) 585
HaeIII GGCC 5 cut(s) 510, 530, 693, 1113, 1222
HgaI GACGC 1 cut(s) 188
Hin1II CATG 9 cut(s) 282, 311, 350, 394, 426, 543, 836, 847, 1112
HincII GTYRAC 1 cut(s) 1008
HindII GTYRAC 1 cut(s) 1008
HinfI GANTC 7 cut(s) 8, 338, 472, 569, 664, 1018, 1239
HphI GGTGA 6 cut(s) 146, 715, 875, 965, 1069, 1193
Hpy166II GTNNAC 3 cut(s) 203, 1008, 1200
Hpy188I TCNGA 3 cut(s) 334, 548, 735
Hpy188III TCNNGA 4 cut(s) 50, 61, 94, 844
Hpy8I GTNNAC 3 cut(s) 203, 1008, 1200
Hpy99I CGWCG 1 cut(s) 83
HpyAV CCTTC 5 cut(s) 316, 347, 466, 598, 640
HpyCH4III ACNGT 4 cut(s) 47, 552, 727, 769
HpyCH4IV ACGT 2 cut(s) 559, 1233
HpyCH4V TGCA 8 cut(s) 181, 218, 278, 287, 492, 636, 713, 1064
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 284, 293, 313, 1052, 1061, 1228
HpyF3I CTNAG 1 cut(s) 992
HpySE526I ACGT 2 cut(s) 559, 1233
Hsp92II CATG 9 cut(s) 282, 311, 350, 394, 426, 543, 836, 847, 1112
KpnI GGTACC 1 cut(s) 252
Kzo9I GATC 1 cut(s) 919
LmnI GCTCC 2 cut(s) 596, 631
Lsp1109I GCAGC 3 cut(s) 193, 308, 407
LweI GCATC 2 cut(s) 316, 948
MaeI CTAG 2 cut(s) 374, 617
MaeII ACGT 2 cut(s) 559, 1233
MaeIII GTNAC 3 cut(s) 1031, 1075, 1181
MalI GATC 1 cut(s) 921
MboI GATC 1 cut(s) 919
MboII GAAGA 7 cut(s) 86, 333, 722, 764, 793, 1013, 1027
MhlI GDGCHC 1 cut(s) 588
MlsI TGGCCA 2 cut(s) 693, 1113
MluCI AATT 3 cut(s) 129, 163, 399
MluNI TGGCCA 2 cut(s) 693, 1113
MlyI GAGTC 3 cut(s) 347, 1012, 1233
MmeI TCCRAC 1 cut(s) 742
MnlI CCTC 9 cut(s) 41, 381, 499, 871, 1172, 1196, 1199, 1212, 1258
Mox20I TGGCCA 2 cut(s) 693, 1113
MscI TGGCCA 2 cut(s) 693, 1113
MseI TTAA 4 cut(s) 155, 555, 579, 1160
MslI CAYNNNNRTG 3 cut(s) 837, 848, 1082
Msp20I TGGCCA 2 cut(s) 693, 1113
MspR9I CCNGG 2 cut(s) 969, 1073
MssI GTTTAAAC 1 cut(s) 556
MvaI CCWGG 2 cut(s) 969, 1073
MvnI CGCG 1 cut(s) 744
MwoI GCNNNNNNNGC 7 cut(s) 11, 284, 293, 313, 1052, 1061, 1228
NcoI CCATGG 1 cut(s) 390
NdeI CATATG 1 cut(s) 574
NdeII GATC 1 cut(s) 919
NlaIII CATG 9 cut(s) 282, 311, 350, 394, 426, 543, 836, 847, 1112
NlaIV GGNNCC 3 cut(s) 250, 585, 830
NmuCI GTSAC 2 cut(s) 1075, 1181
NspI RCATGY 1 cut(s) 350
NspV TTCGAA 1 cut(s) 1024
OliI CACNNNNGTG 1 cut(s) 1082
PagI TCATGA 1 cut(s) 843
PceI AGGCCT 1 cut(s) 1222
PciI ACATGT 1 cut(s) 346
PcsI WCGNNNNNNNCGW 1 cut(s) 556
PfeI GAWTC 4 cut(s) 8, 472, 569, 664
Pfl23II CGTACG 1 cut(s) 1234
PkrI GCNGC 3 cut(s) 183, 298, 397
PleI GAGTC 3 cut(s) 346, 1012, 1233
PmeI GTTTAAAC 1 cut(s) 556
PpsI GAGTC 3 cut(s) 346, 1012, 1233
Ppu21I YACGTR 1 cut(s) 1234
PscI ACATGT 1 cut(s) 346
Psp6I CCWGG 2 cut(s) 967, 1071
PspEI GGTNACC 2 cut(s) 1075, 1181
PspGI CCWGG 2 cut(s) 967, 1071
PspLI CGTACG 1 cut(s) 1234
PspN4I GGNNCC 3 cut(s) 250, 585, 830
PspPI GGNCC 2 cut(s) 368, 508
RsaI GTAC 4 cut(s) 250, 747, 1153, 1236
RsaNI GTAC 4 cut(s) 249, 746, 1152, 1235
RseI CAYNNNNRTG 3 cut(s) 837, 848, 1082
SaqAI TTAA 4 cut(s) 155, 555, 579, 1160
SatI GCNGC 3 cut(s) 182, 297, 396
Sau3AI GATC 1 cut(s) 919
Sau96I GGNCC 2 cut(s) 368, 508
SchI GAGTC 3 cut(s) 347, 1012, 1233
ScrFI CCNGG 2 cut(s) 969, 1073
SduI GDGCHC 1 cut(s) 588
SfaNI GCATC 2 cut(s) 316, 948
SfcI CTRYAG 2 cut(s) 512, 934
SfuI TTCGAA 1 cut(s) 1024
SinI GGWCC 1 cut(s) 368
SmiMI CAYNNNNRTG 3 cut(s) 837, 848, 1082
SmlI CTYRAG 1 cut(s) 755
SmoI CTYRAG 1 cut(s) 755
Sse9I AATT 3 cut(s) 129, 163, 399
SseBI AGGCCT 1 cut(s) 1222
SsiI CCGC 1 cut(s) 1229
SspMI CTAG 2 cut(s) 374, 617
StuI AGGCCT 1 cut(s) 1222
StyD4I CCNGG 2 cut(s) 967, 1071
StyI CCWWGG 4 cut(s) 390, 703, 923, 1164
TaaI ACNGT 4 cut(s) 47, 552, 727, 769
TaiI ACGT 2 cut(s) 562, 1236
TaqI TCGA 2 cut(s) 93, 1024
TasI AATT 3 cut(s) 129, 163, 399
TfiI GAWTC 4 cut(s) 8, 472, 569, 664
Tru1I TTAA 4 cut(s) 155, 555, 579, 1160
Tru9I TTAA 4 cut(s) 155, 555, 579, 1160
TscAI CASTG 3 cut(s) 210, 666, 720
TseFI GTSAC 2 cut(s) 1075, 1181
TseI GCWGC 3 cut(s) 181, 296, 395
Tsp45I GTSAC 2 cut(s) 1075, 1181
TspDTI ATGAA 3 cut(s) 411, 454, 594
TspGWI ACGGA 1 cut(s) 925
TspRI CASTG 3 cut(s) 210, 666, 720
VpaK11BI GGWCC 1 cut(s) 368
XceI RCATGY 1 cut(s) 350
XcmI CCANNNNNNNNNTGG 1 cut(s) 701
XspI CTAG 2 cut(s) 374, 617
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.