Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0002300

Physical Location & Seq

Genomic Coordinates Reverse (-)

20481256 .. 20490097

Gene Structure 8842 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00300280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1446 bp

ATGCTAGCGTTTGACTCGTCGACCGCGTCGGCCGGTTCCTCCGGCTTGGAGATGAAGCTCCCTACCAACACGGGGACCCACATCGACGCCTCCGGCCACGTCTTCGATCACTACTTCGATGCCGGCTTCGACGTCGATTCTCTCAACTTGGATGTAAAGGTTCCGACTTGGATCAATGGTGTAGAAGCCGACGAGTATGTTGGTGTCGGGGCTCGATTTGGACCTACCCTGGAATCAAAGGAGAAGCATGCCAATAATACTAGAGTGCTTGCACGTGAGGTCATTTTGGTACACCGAGGAAATTGCAGTTTTACCACCAAGGCAAATATGGCTGAATCTGCTAATGCTTCAGCCATCCTCATCATAAATAACCGTCCAGAACTTTTCAAGATGGTTTGTGAAGACGACGAGCCTGATGTCGAGATAGGCATCCCTGCTGTTATGCTTCCCAATAAAATTGGTGAAATCTTGGAAAATGGATTAACGAACAATTCCATAGTTTCTGTGCAGCTATACTCTCCATTGCGTCCACTGGTTGACATTGCAGAAGTATTTTTATGGCTTATGGCTGTTGGTACCATCTTATTTGCTTCTTATTGGTCTGCATGGACTGCAAGAGAAGCAGCTATTGAGCATGAAAAGCTATTGAAGGATGCTTCTGACGAGTCTTCACATGTGGAAGGTGAAGGTGCCAGTCCTCTAGTGGAGATTAGCACCATGGCAGCAATTCTCTTTGTTGTGATTGCTTCATGCTTCTTGGTTATGTTTTACAAACTTATGTCCTTCTGGTTCATCGAGATTCTGGTGGTTTTGTTTTGCATTGGGGGGATAGAGGGCCTACAGACTTGCTTGGTGGCCTTGCTATCATGGGGAGGATTTGATGGACGGTTTAAACGTGCTGGAGAATCATATGTTAAGGTGCCCTTCTTTGGAGCTGTTTCATATTTGACACTAGCTGTCGCTCCCTTCTGCATAGCATTTGCTGTTGTTTGGGCAGTGTATCGCCGTGTGTCATTTGCTTGGATTGGGCAAGATATCCTTGGTATTGCACTGATAATCACTGTTCTTCAGATTGTTTGCGTACCGAATCTCAAGGTGGCTCGTGGTGATAAAAGTGGAGAGGATGGTATCCCAATGCTACTTAAAATCCCACGGATGTTTGATCCTTGGGGTGGCTACAGCATCATCGGGTTTGGTGATATTATCTTACCTGGATTGGTTGTAGCCTTTTCACTAAGGTATGATTGGTTGACAAATAAGACTCTTCGAACGGGTTACTTTGTGTGGGCAATGACAGCTTATGGTGCAGGTCTCCTGGTCACCTATGTGGCTTTGAACTTGATGGATGGACATGGCCAACCTGCTTTGTTATACATAGTTCCATTCACACTCGTGTTGACTATGTTTGAAGTCCGCATCATCAGAGTTCATGTTTTGAAAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005765 GO:0005773 GO:0005774 GO:0005783 GO:0005789 GO:0005798 GO:0012505 GO:0016020 GO:0016021 GO:0030176 GO:0030660 GO:0031090 GO:0031224 GO:0031227 GO:0031410 GO:0031982 GO:0031984 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0071458 GO:0071556 GO:0097708 GO:0098552 GO:0098553 GO:0098554 GO:0098562 GO:0098588 GO:0098805 GO:0098827 GO:0098852

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PA Peptidase_A22B

Protein Analysis

481

Amino Acids

52.77

Weight (kDa)

5.1

Isoelectric Point (pI)

31.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PA	PF02225	89 - 157	1.5e-10	PA domain
Peptidase_A22B	PF04258	234 - 366	9.9e-28	Signal peptide peptidase
Peptidase_A22B	PF04258	365 - 468	7.4e-41	Signal peptide peptidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002300)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01650 AT1G01650 AT1G01650 AT1G01650
fragaria_vesca	FvH4_7g14350 FvH4_7g14350 FvH4_7g14350 FvH4_7g14350 FvH4_7g14350
malus_domestica	MD01G1061500.v1.1 MD07G1136600.v1.1
prunus_persica	Prupe.2G171000_v2.0.a1 Prupe.2G171000_v2.0.a1
pyrus_communis	pycom01g09170 pycom07g13430
rosa_chinensis	RchiOBHm_Chr1g0355371
rosa_laevigata	RLG00000028134 RLG00000028139 RLG00000028145 RLG00000028149
rosa_multiflora	Rmu_sc0004484.1_g000010 Rmu_sc0021229.1_g000001
rosa_roxburghii	Rroxscaffold_4G00300080 Rroxscaffold_4G00300120 Rroxscaffold_4G00300280 Rroxscaffold_4G00300370 Rroxscaffold_4G00300460
rosa_rugosa	Rorug01G0246900
rosa_samantha	Rh1AG259400 Rh1AG259500 Rh1AG259800 Rh1AG260300 Rh1AG260900 Rh1BG229000 Rh1BG229200 Rh1CG243400 Rh1CG243500 Rh1DG256900
rosa_wichuraiana	Rw1G020180 Rw1G022870 Rw1G022900 Rw1G022920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	135
Acc36I	ACCTGC	2 cut(s)	1298, 1369
Acc65I	GGTACC	1 cut(s)	575
AccB1I	GGYRCC	3 cut(s)	575, 689, 919
AccI	GTMKAC	1 cut(s)	20
AccII	CGCG	1 cut(s)	26
AciI	CCGC	2 cut(s)	24, 1414
AclWI	GGATC	2 cut(s)	179, 1157
AcoI	YGGCCR	3 cut(s)	30, 94, 1354
AcuI	CTGAAG	2 cut(s)	333, 1052
AcvI	CACGTG	1 cut(s)	275
AcyI	GRCGYC	2 cut(s)	87, 132
AfaI	GTAC	3 cut(s)	291, 577, 1083
AfiI	CCNNNNNNNGG	3 cut(s)	72, 929, 1172
AflIII	ACRYGT	1 cut(s)	673
AgsI	TTSAA	5 cut(s)	388, 649, 1336, 1409, 1438
AjiI	CACGTC	1 cut(s)	100
AjnI	CCWGG	3 cut(s)	228, 1210, 1314
AleI	CACNNNNGTG	2 cut(s)	1325, 1391
AluBI	AGCT	7 cut(s)	58, 511, 626, 643, 935, 956, 1298
AluI	AGCT	7 cut(s)	58, 511, 626, 643, 935, 956, 1298
Alw26I	GTCTC	1 cut(s)	1316
AlwI	GGATC	2 cut(s)	179, 1157
AoxI	GGCC	5 cut(s)	30, 94, 835, 855, 1354
ApeKI	GCWGC	3 cut(s)	508, 623, 722
Asp718I	GGTACC	1 cut(s)	575
AspS9I	GGNCC	3 cut(s)	75, 221, 835
AsuHPI	GGTGA	5 cut(s)	473, 695, 1118, 1208, 1312
AsuII	TTCGAA	1 cut(s)	1267
AsuNHI	GCTAGC	1 cut(s)	4
AvaII	GGWCC	2 cut(s)	75, 221
BaeGI	GKGCMC	1 cut(s)	924
BalI	TGGCCA	1 cut(s)	1356
BanI	GGYRCC	3 cut(s)	575, 689, 919
BanII	GRGCYC	1 cut(s)	214
BauI	CACGAG	2 cut(s)	1101, 1391
BbrPI	CACGTG	1 cut(s)	275
BbsI	GAAGAC	3 cut(s)	94, 408, 660
BbvI	GCAGC	3 cut(s)	520, 635, 734
BccI	CCATC	7 cut(s)	362, 385, 587, 875, 1118, 1336, 1340
BceAI	ACGGC	1 cut(s)	990
BcgI	CGANNNNNNTGC	2 cut(s)	285, 319
BciT130I	CCWGG	3 cut(s)	230, 1212, 1316
BciVI	GTATCC	1 cut(s)	1139
BcoDI	GTCTC	1 cut(s)	1316
BfaI	CTAG	4 cut(s)	5, 261, 701, 953
BfmI	CTRYAG	2 cut(s)	839, 1177
BfuAI	ACCTGC	2 cut(s)	1298, 1369
BfuI	GTATCC	1 cut(s)	1139
BisI	GCNGC	3 cut(s)	509, 624, 723
BlsI	GCNGC	3 cut(s)	510, 625, 724
Bme1390I	CCNGG	3 cut(s)	230, 1212, 1316
Bme18I	GGWCC	2 cut(s)	75, 221
BmgBI	CACGTC	1 cut(s)	100
BmgT120I	GGNCC	3 cut(s)	75, 221, 835
BmiI	GGNNCC	7 cut(s)	37, 76, 77, 162, 577, 691, 921
BmrFI	CCNGG	3 cut(s)	230, 1212, 1316
BmsI	GCATC	5 cut(s)	109, 438, 643, 1191, 1425
BmtI	GCTAGC	1 cut(s)	8
BpiI	GAAGAC	3 cut(s)	94, 408, 660
BpmI	CTGGAG	1 cut(s)	921
Bpu14I	TTCGAA	1 cut(s)	1267
BpuEI	CTTGAG	1 cut(s)	1076
BsaAI	YACGTR	1 cut(s)	275
BsaBI	GATNNNNATC	1 cut(s)	428
BsaHI	GRCGYC	2 cut(s)	87, 132
BsaI	GGTCTC	1 cut(s)	1316
BsaJI	CCNNGG	7 cut(s)	228, 295, 318, 717, 1039, 1151, 1166
Bsc4I	CCNNNNNNNGG	3 cut(s)	72, 929, 1172
Bse118I	RCCGGY	2 cut(s)	32, 122
Bse1I	ACTGG	2 cut(s)	537, 693
Bse3DI	GCAATG	3 cut(s)	521, 540, 1296
Bse8I	GATNNNNATC	1 cut(s)	428
BseBI	CCWGG	3 cut(s)	230, 1212, 1316
BseDI	CCNNGG	7 cut(s)	228, 295, 318, 717, 1039, 1151, 1166
BseGI	GGATG	7 cut(s)	157, 354, 429, 658, 1129, 1161, 1351
BseJI	GATNNNNATC	1 cut(s)	428
BseLI	CCNNNNNNNGG	3 cut(s)	72, 929, 1172
BseMI	GCAATG	3 cut(s)	521, 540, 1296
BseNI	ACTGG	2 cut(s)	537, 693
BseSI	GKGCMC	1 cut(s)	924
BseX3I	CGGCCG	1 cut(s)	30
BseXI	GCAGC	3 cut(s)	520, 635, 734
BsgI	GTGCAG	2 cut(s)	527, 1326
Bsh1236I	CGCG	1 cut(s)	26
Bsh1285I	CGRYCG	2 cut(s)	24, 33
BshFI	GGCC	5 cut(s)	32, 96, 837, 857, 1356
BshNI	GGYRCC	3 cut(s)	575, 689, 919
BsiEI	CGRYCG	2 cut(s)	24, 33
BsiSI	CCGG	4 cut(s)	33, 42, 93, 123
BslFI	GGGAC	1 cut(s)	88
BslI	CCNNNNNNNGG	3 cut(s)	72, 929, 1172
BsmAI	GTCTC	1 cut(s)	1316
BsmFI	GGGAC	1 cut(s)	88
BsnI	GGCC	5 cut(s)	32, 96, 837, 857, 1356
Bso31I	GGTCTC	1 cut(s)	1316
Bsp119I	TTCGAA	1 cut(s)	1267
Bsp1286I	GDGCHC	2 cut(s)	214, 924
Bsp143I	GATC	3 cut(s)	106, 171, 1162
Bsp19I	CCATGG	1 cut(s)	717
BspACI	CCGC	2 cut(s)	24, 1414
BspANI	GGCC	5 cut(s)	32, 96, 837, 857, 1356
BspFNI	CGCG	1 cut(s)	26
BspLI	GGNNCC	7 cut(s)	37, 76, 77, 162, 577, 691, 921
BspMI	ACCTGC	2 cut(s)	1298, 1369
BspOI	GCTAGC	1 cut(s)	8
BspPI	GGATC	2 cut(s)	179, 1157
BspT104I	TTCGAA	1 cut(s)	1267
BspT107I	GGYRCC	3 cut(s)	575, 689, 919
BspTNI	GGTCTC	1 cut(s)	1316
BsrDI	GCAATG	3 cut(s)	521, 540, 1296
BsrFI	RCCGGY	2 cut(s)	32, 122
BsrI	ACTGG	2 cut(s)	537, 693
BssAI	RCCGGY	2 cut(s)	32, 122
BssECI	CCNNGG	7 cut(s)	228, 295, 318, 717, 1039, 1151, 1166
BssMI	GATC	3 cut(s)	106, 171, 1162
BssNI	GRCGYC	2 cut(s)	87, 132
BssSI	CACGAG	2 cut(s)	1101, 1391
BssT1I	CCWWGG	4 cut(s)	318, 717, 1039, 1166
Bst2BI	CACGAG	2 cut(s)	1101, 1391
Bst2UI	CCWGG	3 cut(s)	230, 1212, 1316
Bst4CI	ACNGT	3 cut(s)	374, 888, 1063
Bst6I	CTCTTC	1 cut(s)	1269
BstACI	GRCGYC	2 cut(s)	87, 132
BstAPI	GCANNNNNTGC	1 cut(s)	611
BstBAI	YACGTR	1 cut(s)	275
BstBI	TTCGAA	1 cut(s)	1267
BstC8I	GCNNGC	4 cut(s)	6, 124, 249, 270
BstDEI	CTNAG	1 cut(s)	1235
BstDSI	CCRYGG	2 cut(s)	717, 1151
BstEII	GGTNACC	1 cut(s)	1318
BstF5I	GGATG	7 cut(s)	157, 354, 429, 658, 1129, 1161, 1351
BstFNI	CGCG	1 cut(s)	26
BstKTI	GATC	3 cut(s)	109, 174, 1165
BstMAI	GTCTC	1 cut(s)	1316
BstMBI	GATC	3 cut(s)	106, 171, 1162
BstMCI	CGRYCG	2 cut(s)	24, 33
BstMWI	GCNNNNNNNGC	7 cut(s)	329, 338, 611, 620, 640, 1295, 1304
BstNI	CCWGG	3 cut(s)	230, 1212, 1316
BstNSI	RCATGY	2 cut(s)	251, 677
BstPI	GGTNACC	1 cut(s)	1318
BstSCI	CCNGG	3 cut(s)	228, 1210, 1314
BstSFI	CTRYAG	2 cut(s)	839, 1177
BstSLI	GKGCMC	1 cut(s)	924
BstUI	CGCG	1 cut(s)	26
BstV1I	GCAGC	3 cut(s)	520, 635, 734
BstV2I	GAAGAC	3 cut(s)	94, 408, 660
BstZI	CGGCCG	1 cut(s)	30
BsuI	GTATCC	1 cut(s)	1139
BsuRI	GGCC	5 cut(s)	32, 96, 837, 857, 1356
BtgI	CCRYGG	2 cut(s)	717, 1151
BtrI	CACGTC	1 cut(s)	100
BtsCI	GGATG	7 cut(s)	157, 354, 429, 658, 1129, 1161, 1351
BtsI	GCAGTG	1 cut(s)	1002
BtsIMutI	CAGTG	4 cut(s)	530, 1002, 1049, 1059
BveI	ACCTGC	2 cut(s)	1298, 1369
Cac8I	GCNNGC	4 cut(s)	6, 124, 249, 270
Cfr10I	RCCGGY	2 cut(s)	32, 122
Cfr13I	GGNCC	3 cut(s)	75, 221, 835
CseI	GACGC	3 cut(s)	15, 95, 515
Csp6I	GTAC	3 cut(s)	290, 576, 1082
CviAII	CATG	9 cut(s)	248, 606, 635, 674, 718, 750, 867, 1352, 1430
CviQI	GTAC	3 cut(s)	290, 576, 1082
DdeI	CTNAG	1 cut(s)	1235
DpnI	GATC	3 cut(s)	108, 173, 1164
DpnII	GATC	3 cut(s)	106, 171, 1162
DraI	TTTAAA	1 cut(s)	892
EaeI	YGGCCR	3 cut(s)	30, 94, 1354
EagI	CGGCCG	1 cut(s)	30
Eam1104I	CTCTTC	1 cut(s)	1269
EarI	CTCTTC	1 cut(s)	1269
EclXI	CGGCCG	1 cut(s)	30
Eco130I	CCWWGG	4 cut(s)	318, 717, 1039, 1166
Eco24I	GRGCYC	1 cut(s)	214
Eco31I	GGTCTC	1 cut(s)	1316
Eco32I	GATATC	1 cut(s)	1036
Eco47I	GGWCC	2 cut(s)	75, 221
Eco52I	CGGCCG	1 cut(s)	30
Eco57I	CTGAAG	2 cut(s)	333, 1052
Eco72I	CACGTG	1 cut(s)	275
Eco91I	GGTNACC	1 cut(s)	1318
EcoO109I	RGGNCCY	2 cut(s)	75, 835
EcoO65I	GGTNACC	1 cut(s)	1318
EcoRII	CCWGG	3 cut(s)	228, 1210, 1314
EcoRV	GATATC	1 cut(s)	1036
EcoT14I	CCWWGG	4 cut(s)	318, 717, 1039, 1166
EcoT38I	GRGCYC	1 cut(s)	214
ErhI	CCWWGG	4 cut(s)	318, 717, 1039, 1166
FaeI	CATG	9 cut(s)	251, 609, 638, 677, 721, 753, 870, 1355, 1433
FalI	AAGNNNNNCTT	4 cut(s)	908, 940, 1023, 1055
FaqI	GGGAC	1 cut(s)	88
FatI	CATG	9 cut(s)	247, 605, 634, 673, 717, 749, 866, 1351, 1429
FauNDI	CATATG	1 cut(s)	910
FblI	GTMKAC	1 cut(s)	20
Fnu4HI	GCNGC	3 cut(s)	509, 624, 723
FokI	GGATG	7 cut(s)	164, 341, 416, 665, 1136, 1168, 1358
FriOI	GRGCYC	1 cut(s)	214
Fsp4HI	GCNGC	3 cut(s)	509, 624, 723
FspBI	CTAG	4 cut(s)	5, 261, 701, 953
GluI	GCNGC	3 cut(s)	509, 624, 723
GsuI	CTGGAG	1 cut(s)	921
HaeIII	GGCC	5 cut(s)	32, 96, 837, 857, 1356
HapII	CCGG	4 cut(s)	33, 42, 93, 123
HgaI	GACGC	3 cut(s)	15, 95, 515
Hin1I	GRCGYC	2 cut(s)	87, 132
Hin1II	CATG	9 cut(s)	251, 609, 638, 677, 721, 753, 870, 1355, 1433
HincII	GTYRAC	4 cut(s)	21, 538, 1251, 1398
HindII	GTYRAC	4 cut(s)	21, 538, 1251, 1398
HinfI	GANTC	9 cut(s)	14, 137, 233, 335, 665, 799, 905, 1087, 1261
HpaII	CCGG	4 cut(s)	33, 42, 93, 123
HphI	GGTGA	5 cut(s)	473, 695, 1118, 1208, 1312
Hpy166II	GTNNAC	6 cut(s)	21, 292, 530, 538, 1251, 1398
Hpy188I	TCNGA	4 cut(s)	165, 661, 1071, 1424
Hpy188III	TCNNGA	4 cut(s)	377, 388, 421, 796
Hpy8I	GTNNAC	6 cut(s)	21, 292, 530, 538, 1251, 1398
Hpy99I	CGWCG	7 cut(s)	22, 31, 89, 134, 137, 194, 410
HpyAV	CCTTC	6 cut(s)	643, 674, 680, 793, 934, 976
HpyCH4III	ACNGT	3 cut(s)	374, 888, 1063
HpyCH4IV	ACGT	4 cut(s)	99, 132, 274, 895
HpyF10VI	GCNNNNNNNGC	7 cut(s)	329, 338, 611, 620, 640, 1295, 1304
HpyF3I	CTNAG	1 cut(s)	1235
HpySE526I	ACGT	4 cut(s)	99, 132, 274, 895
Hsp92I	GRCGYC	2 cut(s)	87, 132
Hsp92II	CATG	9 cut(s)	251, 609, 638, 677, 721, 753, 870, 1355, 1433
KflI	GGGWCCC	1 cut(s)	75
KpnI	GGTACC	1 cut(s)	579
KroI	GCCGGC	1 cut(s)	122
KroNI	GCCGGC	1 cut(s)	124
Kzo9I	GATC	3 cut(s)	106, 171, 1162
LmnI	GCTCC	3 cut(s)	63, 932, 967
Lsp1109I	GCAGC	3 cut(s)	520, 635, 734
LweI	GCATC	5 cut(s)	109, 438, 643, 1191, 1425
MaeI	CTAG	4 cut(s)	5, 261, 701, 953
MaeII	ACGT	4 cut(s)	99, 132, 274, 895
MaeIII	GTNAC	2 cut(s)	1274, 1318
MalI	GATC	3 cut(s)	108, 173, 1164
MboI	GATC	3 cut(s)	106, 171, 1162
MboII	GAAGA	5 cut(s)	94, 413, 660, 1058, 1256
MhlI	GDGCHC	2 cut(s)	214, 924
MlsI	TGGCCA	1 cut(s)	1356
MluCI	AATT	4 cut(s)	301, 456, 490, 726
MluNI	TGGCCA	1 cut(s)	1356
MlyI	GAGTC	3 cut(s)	8, 674, 1255
MmeI	TCCRAC	1 cut(s)	188
MnlI	CCTC	9 cut(s)	49, 100, 271, 290, 368, 708, 826, 866, 1114
Mox20I	TGGCCA	1 cut(s)	1356
MroNI	GCCGGC	1 cut(s)	122
MscI	TGGCCA	1 cut(s)	1356
MseI	TTAA	4 cut(s)	482, 891, 915, 1143
MslI	CAYNNNNRTG	2 cut(s)	1325, 1391
Msp20I	TGGCCA	1 cut(s)	1356
MspI	CCGG	4 cut(s)	33, 42, 93, 123
MspR9I	CCNGG	3 cut(s)	230, 1212, 1316
MssI	GTTTAAAC	1 cut(s)	892
MvaI	CCWGG	3 cut(s)	230, 1212, 1316
MvnI	CGCG	1 cut(s)	26
MwoI	GCNNNNNNNGC	7 cut(s)	329, 338, 611, 620, 640, 1295, 1304
NaeI	GCCGGC	1 cut(s)	124
NcoI	CCATGG	1 cut(s)	717
NdeI	CATATG	1 cut(s)	910
NdeII	GATC	3 cut(s)	106, 171, 1162
NgoMIV	GCCGGC	1 cut(s)	122
NheI	GCTAGC	1 cut(s)	4
NlaIII	CATG	9 cut(s)	251, 609, 638, 677, 721, 753, 870, 1355, 1433
NlaIV	GGNNCC	7 cut(s)	37, 76, 77, 162, 577, 691, 921
NmuCI	GTSAC	1 cut(s)	1318
NspI	RCATGY	2 cut(s)	251, 677
NspV	TTCGAA	1 cut(s)	1267
OliI	CACNNNNGTG	2 cut(s)	1325, 1391
PaeI	GCATGC	1 cut(s)	251
PciI	ACATGT	1 cut(s)	673
PcsI	WCGNNNNNNNCGW	2 cut(s)	23, 892
PdiI	GCCGGC	1 cut(s)	124
PfeI	GAWTC	6 cut(s)	137, 233, 335, 799, 905, 1087
PflFI	GACNNNGTC	1 cut(s)	25
PkrI	GCNGC	3 cut(s)	510, 625, 724
PleI	GAGTC	3 cut(s)	8, 673, 1255
PmaCI	CACGTG	1 cut(s)	275
PmeI	GTTTAAAC	1 cut(s)	892
PmlI	CACGTG	1 cut(s)	275
PpsI	GAGTC	3 cut(s)	8, 673, 1255
Ppu21I	YACGTR	1 cut(s)	275
PpuMI	RGGWCCY	1 cut(s)	75
PscI	ACATGT	1 cut(s)	673
Psp5II	RGGWCCY	1 cut(s)	75
Psp6I	CCWGG	3 cut(s)	228, 1210, 1314
PspCI	CACGTG	1 cut(s)	275
PspEI	GGTNACC	1 cut(s)	1318
PspGI	CCWGG	3 cut(s)	228, 1210, 1314
PspN4I	GGNNCC	7 cut(s)	37, 76, 77, 162, 577, 691, 921
PspPI	GGNCC	3 cut(s)	75, 221, 835
PspPPI	RGGWCCY	1 cut(s)	75
PsyI	GACNNNGTC	1 cut(s)	25
RsaI	GTAC	3 cut(s)	291, 577, 1083
RsaNI	GTAC	3 cut(s)	290, 576, 1082
RseI	CAYNNNNRTG	2 cut(s)	1325, 1391
SalI	GTCGAC	1 cut(s)	19
SaqAI	TTAA	4 cut(s)	482, 891, 915, 1143
SatI	GCNGC	3 cut(s)	509, 624, 723
Sau3AI	GATC	3 cut(s)	106, 171, 1162
Sau96I	GGNCC	3 cut(s)	75, 221, 835
SchI	GAGTC	3 cut(s)	8, 674, 1255
ScrFI	CCNGG	3 cut(s)	230, 1212, 1316
SduI	GDGCHC	2 cut(s)	214, 924
SfaNI	GCATC	5 cut(s)	109, 438, 643, 1191, 1425
SfcI	CTRYAG	2 cut(s)	839, 1177
SfuI	TTCGAA	1 cut(s)	1267
SinI	GGWCC	2 cut(s)	75, 221
SmiMI	CAYNNNNRTG	2 cut(s)	1325, 1391
SmlI	CTYRAG	1 cut(s)	1091
SmoI	CTYRAG	1 cut(s)	1091
SphI	GCATGC	1 cut(s)	251
Sse9I	AATT	4 cut(s)	301, 456, 490, 726
SsiI	CCGC	2 cut(s)	24, 1414
SspMI	CTAG	4 cut(s)	5, 261, 701, 953
StyD4I	CCNGG	3 cut(s)	228, 1210, 1314
StyI	CCWWGG	4 cut(s)	318, 717, 1039, 1166
TaaI	ACNGT	3 cut(s)	374, 888, 1063
TaiI	ACGT	4 cut(s)	102, 135, 277, 898
TasI	AATT	4 cut(s)	301, 456, 490, 726
TfiI	GAWTC	6 cut(s)	137, 233, 335, 799, 905, 1087
Tru1I	TTAA	4 cut(s)	482, 891, 915, 1143
Tru9I	TTAA	4 cut(s)	482, 891, 915, 1143
TscAI	CASTG	4 cut(s)	537, 1002, 1056, 1066
TseFI	GTSAC	1 cut(s)	1318
TseI	GCWGC	3 cut(s)	508, 623, 722
Tsp45I	GTSAC	1 cut(s)	1318
TspDTI	ATGAA	6 cut(s)	68, 651, 738, 781, 930, 1418
TspGWI	ACGGA	1 cut(s)	1168
TspRI	CASTG	4 cut(s)	537, 1002, 1056, 1066
Tth111I	GACNNNGTC	1 cut(s)	25
VpaK11BI	GGWCC	2 cut(s)	75, 221
XceI	RCATGY	2 cut(s)	251, 677
XcmI	CCANNNNNNNNNTGG	2 cut(s)	325, 700
XmiI	GTMKAC	1 cut(s)	20
XspI	CTAG	4 cut(s)	5, 261, 701, 953
ZraI	GACGTC	1 cut(s)	133

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.