Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0001175

Physical Location & Seq

Genomic Coordinates Forward (+)

67554615 .. 67558602

Gene Structure 3988 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000030789

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGCTTGTTAGCACACGACACGGCGTTGGCAAAAGTTACAGCGACGTGCTCAGGTGCACATCCTCTACAGCTGCGGCAGGAACCCATCCGTCCAGCCCAGATCTCTCTCTGCAACTTCAATTCTTCAACTTCAACTTCAAGTTCATAATGTGGAGGTTCAAGCCTTTTATGCACAAGGAGCCAGCTGGCCTCGAAGGCCGCTCCATTGACGTCGGAGCTCTCAAGATTCAGGTGAAGAATGTCATTGCCGAAGGAGGGTTCTCTTGCGTTTACTTAGCTCGGGACCTTGTCCATACCTCAAAGCAGTATGCTTTGAAGCACATCATATGTAATGATGAAGAGTTGCTGGAGTTGGTGACGAAGGAAATCTCCGTCATGAAGTTACTCAGAGGGCATCCCAATGTTGTCACTCTCTATGCCCACGCCATCATGGATTTGGGCCGCACAAAGGAGGCACTCCTTGTGATGGAATATTGTGACAAGTCTCTGGTTACCGTACTCGATAGCAGAGGAGCTGGCTTTTTTGATGAGAAACAGGTCCTTGCAATCTTCAGAGATGTGTGCACTGCAGTTTTTGCAATGCACACACTGTCCCCTCCCATTGCTCATAGGGATTTGAAAGCTGAGAATCTTCTGTTGGGGCCGGATGGACTGTGGAAATTGTGTGATTTTGGAAGCACCTCTACCAACCACAAGCGCTTTGAGAAGCCTGAAGAAATGGGTATTGAAGAAGACATTATCAGAAAGCACACAACACCTGCCTACAGGGCCCCTGAGATGTGGGATCTATTTCGGAGAGAACTTATCAGTGAGAAAGTAGACATATGGGCTCTTGGCTGCCTTCTCTTTCGCATTTGCTACTTCAAAAGTGCATTCGATGGAGAGTCAAAGCTGCAGATCTTGAATGGAAACTATCGCATTCCTGAGTTACCTAAATACGGCTCGTCGATTACAGATCTCATCAGAGACATGCTTCAGGCATCACCAGACGACAGACCAGATATCACGCAGGTGTGGTTTCGTGTTAATGAGCTGTTACCAGTTGGTTTACAGAAGTCTTTACCTGATAGGCCACCTGAAATGCACTCTGCTGGAAAACATGAAGGTTTTTCAAGGCCCGCAAACAAGTCGCCTGAAATGCCCCGTAGAAGCCCACCCCCACCACCTTCAGTGGGAGAATCAGCTAGAAATCCATCACAACCGTCAAATATGTCCAAGGCAGGGGGAGGTGGAGGGCCGCTTGGTGCATTCTGGTCCACTCAGCATGCTGAGGATTCAGTTGTTGCTGAAGAAAAGACTGTACCTAAGTTTGATGATTCTAATCATCCTTTACCCAAGAACAGTGCCCCCGCAAAAGTGGAAAATACACCAACCTATGCTGCACGAAGAAACTCACACGTGAAATCGCACAAGCATGAAGATGGATTTCCAAAGGACATTGAAATAAATTTCTTCCAGAAGGATACTGACCTTGGTGCTGAGAGGCCAAAGGCATCCAAGCCTGAGAGTGCAACTAGTTTTCACGATGATGCATTTAACTCGTTTGTTGCTGAATTTGATACTAATAAACTCAGTGTGGGAGCTAGTAATAGCAAATCAGGAAAAGAAGGAGCATTAGAGACTGAAGTAGAGAGATTGAAGGAGCAGCTGAACCAAGCCAACATAGAAAAGGCTGAAATAACTTCCAAATTTGAAAAGCTATCAGCTATCTGCCGATCTCAAAGGCAAGAGTTGCAGGAGCTTAAGCAGACGCTTGCCGCTAGAACACCTTCACCGAATAAAGATGCTTTGAGAAATCAAATGTCACCTGGCATTCAGTCATCCGCAACCCCACCGGTACTGTTTTCAAAACAGAGGGAGAAGACAGAAGGAGCCATTTGGGAACTCCAGCAGGATAAATCTGACCGGAAAACTCCGAGTCCAGAGACAAAGTCATGGCAGCCGTTTGCAGAACCACAGCCTTCTTCAACGGACAACACTGTCAAATCTGTCAGGACAAGAAATGGTCACCAGAACAAGCAAGCTACGACCCAAGTAAATACTGGTTTTGACTCGTGGGGTTTTGGAACAGAGAGCTTTTCTGCTGCGCCCACTGGAAGCACCCAAATATCAAGACCTATGGGTGAAGGAAATATTTCTCAGCGTTTTGGTGATGCAAAGGCCAAGGAGAGCAAGCCAGCTTCTCAACCTGCTGGATGGGCTGGTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030100 GO:0032879 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051049 GO:0051128 GO:0060627 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

737

Amino Acids

81.71

Weight (kDa)

7.96

Isoelectric Point (pI)

53.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	76 - 338	6.6e-24	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	77 - 338	2e-40	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001175)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32850 AT2G32850
fragaria_vesca	FvH4_7g00200 FvH4_7g00210 FvH4_7g00210
malus_domestica	MD02G1318100.v1.1 MD14G1085700.v1.1 MD14G1085800.v1.1
prunus_persica	Prupe.2G004700_v2.0.a1 Prupe.2G004800_v2.0.a1 Prupe.2G004800_v2.0.a1 Prupe.2G004800_v2.0.a1 Prupe.2G004800_v2.0.a1 Prupe.2G004800_v2.0.a1
pyrus_communis	pycom02g26640 pycom14g07560
rosa_chinensis	RchiOBHm_Chr1g0313461 RchiOBHm_Chr1g0313481 RchiOBHm_Chr1g0313501 RchiOBHm_Chr1g0313511 RchiOBHm_Chr1g0313531 RchiOBHm_Chr1g0313561 RchiOBHm_Chr1g0313571 RchiOBHm_Chr1g0313591 RchiOBHm_Chr1g0313601 RchiOBHm_Chr1g0313611 RchiOBHm_Chr1g0313621 RchiOBHm_Chr1g0313631 RchiOBHm_Chr1g0372901
rosa_laevigata	RLG00000026867 RLG00000030789 RLG00000030790 RLG00000030791
rosa_multiflora	Rmu_co8009002.1_g000001 Rmu_sc0000931.1_g000014 Rmu_sc0000931.1_g000018 Rmu_sc0015122.1_g000001
rosa_roxburghii	Rroxscaffold_4G00284640 Rroxscaffold_4G00332160
rosa_rugosa	Rorug01G0374800 RorugPtG0005200.1 RorugPtG0005300.1 RorugPtG0005400.1
rosa_samantha	Rh1AG003900 Rh1AG005500 Rh1BG000900 Rh1CG000500 Rh1CG000700 Rh1CG008400 Rh1DG003600 Rh1DG003700 Rh1DG003800 Rh1DG378100
rosa_wichuraiana	Rw1G000310 Rw1G000320 Rw1G000330 Rw1G033770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	766, 1000
AasI	GACNNNNNNGTC	1 cut(s)	1979
AatII	GACGTC	1 cut(s)	213
Acc36I	ACCTGC	3 cut(s)	766, 1000, 2197
AccBSI	CCGCTC	1 cut(s)	201
AccI	GTMKAC	1 cut(s)	819
AciI	CCGC	8 cut(s)	74, 199, 442, 1119, 1238, 1350, 1758, 1824
AclWI	GGATC	1 cut(s)	792
AcsI	RAATTY	3 cut(s)	1447, 1553, 1688
AcuI	CTGAAG	6 cut(s)	535, 732, 959, 1152, 1308, 1644
AcvI	CACGTG	1 cut(s)	1399
AcyI	GRCGYC	1 cut(s)	210
AfaI	GTAC	3 cut(s)	498, 1302, 1839
AfeI	AGCGCT	1 cut(s)	698
AfiI	CCNNNNNNNGG	6 cut(s)	255, 448, 466, 938, 1172, 1221
AflII	CTTAAG	1 cut(s)	1742
AflIII	ACRYGT	1 cut(s)	1396
AgeI	ACCGGT	1 cut(s)	1834
AhlI	ACTAGT	1 cut(s)	1514
AjiI	CACGTC	1 cut(s)	46
AjnI	CCWGG	1 cut(s)	1807
AjuI	GAANNNNNNNTTGG	2 cut(s)	620, 652
AleI	CACNNNNGTG	1 cut(s)	1010
Alw21I	GWGCWC	4 cut(s)	51, 59, 220, 566
Alw26I	GTCTC	4 cut(s)	489, 960, 1613, 1919
Alw44I	GTGCAC	2 cut(s)	55, 562
AlwI	GGATC	1 cut(s)	792
Ama87I	CYCGRG	1 cut(s)	279
Aor51HI	AGCGCT	1 cut(s)	698
ApaI	GGGCCC	1 cut(s)	772
ApaLI	GTGCAC	2 cut(s)	55, 562
ApeKI	GCWGC	7 cut(s)	71, 837, 892, 1379, 1645, 1939, 2084
ApoI	RAATTY	3 cut(s)	1447, 1553, 1688
AsiGI	ACCGGT	1 cut(s)	1834
Asp700I	GAANNNNTTC	2 cut(s)	1768, 2134
AspLEI	GCGC	2 cut(s)	699, 2089
AspS9I	GGNCC	9 cut(s)	283, 439, 538, 641, 768, 769, 1116, 1235, 1254
AsuHPI	GGTGA	8 cut(s)	244, 367, 975, 1764, 1797, 2000, 2135, 2162
AvaI	CYCGRG	1 cut(s)	279
AvaII	GGWCC	3 cut(s)	283, 538, 1254
BaeGI	GKGCMC	4 cut(s)	59, 566, 772, 1348
BanII	GRGCYC	3 cut(s)	220, 772, 832
BarI	GAAGNNNNNNTAC	2 cut(s)	667, 699
BauI	CACGAG	1 cut(s)	2053
BbrPI	CACGTG	1 cut(s)	1399
BbsI	GAAGAC	2 cut(s)	738, 1868
Bbv12I	GWGCWC	4 cut(s)	51, 59, 220, 566
BbvCI	CCTCAGC	1 cut(s)	1269
BbvI	GCAGC	7 cut(s)	58, 824, 879, 1366, 1657, 1951, 2071
BccI	CCATC	8 cut(s)	93, 434, 460, 641, 872, 1201, 1415, 2190
BceAI	ACGGC	3 cut(s)	37, 955, 1927
BcgI	CGANNNNNNTGC	4 cut(s)	1110, 1144, 1521, 1555
BciT130I	CCWGG	1 cut(s)	1809
BciVI	GTATCC	1 cut(s)	1456
BcoDI	GTCTC	4 cut(s)	489, 960, 1613, 1919
BcuI	ACTAGT	1 cut(s)	1514
BfaI	CTAG	4 cut(s)	1185, 1515, 1584, 1761
BfmI	CTRYAG	4 cut(s)	66, 567, 763, 893
BfoI	RGCGCY	1 cut(s)	700
BfrI	CTTAAG	1 cut(s)	1742
BfuAI	ACCTGC	3 cut(s)	766, 1000, 2197
BfuI	GTATCC	1 cut(s)	1456
BglI	GCCNNNNNGGC	2 cut(s)	195, 767
BglII	AGATCT	3 cut(s)	100, 897, 955
Bme1390I	CCNGG	1 cut(s)	1809
Bme18I	GGWCC	3 cut(s)	283, 538, 1254
BmeT110I	CYCGRG	1 cut(s)	279
BmgBI	CACGTC	1 cut(s)	46
BmgT120I	GGNCC	9 cut(s)	283, 439, 538, 641, 768, 769, 1116, 1235, 1254
BmiI	GGNNCC	7 cut(s)	82, 180, 284, 642, 770, 771, 1873
BmrFI	CCNGG	1 cut(s)	1809
BmsI	GCATC	6 cut(s)	403, 989, 1502, 1519, 1774, 2143
BpiI	GAAGAC	2 cut(s)	738, 1868
BpmI	CTGGAG	2 cut(s)	368, 1871
Bpu10I	CCTNAGC	2 cut(s)	50, 1269
BpuEI	CTTGAG	1 cut(s)	206
BsaAI	YACGTR	1 cut(s)	1399
BsaBI	GATNNNNATC	1 cut(s)	1320
BsaHI	GRCGYC	1 cut(s)	210
BsaJI	CCNNGG	3 cut(s)	1215, 1471, 2163
BsaWI	WCCGGW	2 cut(s)	1834, 1905
Bsc4I	CCNNNNNNNGG	6 cut(s)	255, 448, 466, 938, 1172, 1221
Bse118I	RCCGGY	1 cut(s)	1834
Bse1I	ACTGG	3 cut(s)	1040, 2047, 2098
Bse3DI	GCAATG	3 cut(s)	243, 585, 600
Bse8I	GATNNNNATC	1 cut(s)	1320
BseBI	CCWGG	1 cut(s)	1809
BseDI	CCNNGG	3 cut(s)	1215, 1471, 2163
BseGI	GGATG	8 cut(s)	59, 85, 394, 652, 1324, 1493, 1820, 2201
BseJI	GATNNNNATC	1 cut(s)	1320
BseLI	CCNNNNNNNGG	6 cut(s)	255, 448, 466, 938, 1172, 1221
BseMI	GCAATG	3 cut(s)	243, 585, 600
BseNI	ACTGG	3 cut(s)	1040, 2047, 2098
BseRI	GAGGAG	1 cut(s)	525
BseSI	GKGCMC	4 cut(s)	59, 566, 772, 1348
BseXI	GCAGC	7 cut(s)	58, 824, 879, 1366, 1657, 1951, 2071
BsgI	GTGCAG	1 cut(s)	1365
BshTI	ACCGGT	1 cut(s)	1834
BsiHKAI	GWGCWC	4 cut(s)	51, 59, 220, 566
BsiHKCI	CYCGRG	1 cut(s)	279
BsiSI	CCGG	3 cut(s)	644, 1835, 1906
BslFI	GGGAC	2 cut(s)	296, 577
BslI	CCNNNNNNNGG	6 cut(s)	255, 448, 466, 938, 1172, 1221
BsmAI	GTCTC	4 cut(s)	489, 960, 1613, 1919
BsmFI	GGGAC	2 cut(s)	296, 577
BsmI	GAATGC	4 cut(s)	872, 918, 1247, 1812
BsoBI	CYCGRG	1 cut(s)	279
Bsp120I	GGGCCC	1 cut(s)	768
Bsp1286I	GDGCHC	7 cut(s)	51, 59, 220, 566, 772, 832, 1348
Bsp143I	GATC	5 cut(s)	100, 784, 897, 955, 1715
BspACI	CCGC	8 cut(s)	74, 199, 442, 1119, 1238, 1350, 1758, 1824
BspHI	TCATGA	1 cut(s)	375
BspLI	GGNNCC	7 cut(s)	82, 180, 284, 642, 770, 771, 1873
BspMAI	CTGCAG	2 cut(s)	571, 897
BspMI	ACCTGC	3 cut(s)	766, 1000, 2197
BspPI	GGATC	1 cut(s)	792
BspTI	CTTAAG	1 cut(s)	1742
BsrBI	CCGCTC	1 cut(s)	201
BsrDI	GCAATG	3 cut(s)	243, 585, 600
BsrFI	RCCGGY	1 cut(s)	1834
BsrI	ACTGG	3 cut(s)	1040, 2047, 2098
BssAI	RCCGGY	1 cut(s)	1834
BssECI	CCNNGG	3 cut(s)	1215, 1471, 2163
BssMI	GATC	5 cut(s)	100, 784, 897, 955, 1715
BssNI	GRCGYC	1 cut(s)	210
BssSI	CACGAG	1 cut(s)	2053
BssT1I	CCWWGG	3 cut(s)	1215, 1471, 2163
Bst2BI	CACGAG	1 cut(s)	2053
Bst2UI	CCWGG	1 cut(s)	1809
Bst4CI	ACNGT	8 cut(s)	496, 591, 654, 1203, 1300, 1343, 1842, 1981
Bst6I	CTCTTC	1 cut(s)	333
BstACI	GRCGYC	1 cut(s)	210
BstAFI	CTTAAG	1 cut(s)	1742
BstAPI	GCANNNNNTGC	2 cut(s)	575, 1732
BstBAI	YACGTR	1 cut(s)	1399
BstC8I	GCNNGC	9 cut(s)	183, 187, 517, 1119, 1266, 1755, 2022, 2174, 2178
BstEII	GGTNACC	2 cut(s)	490, 2006
BstF5I	GGATG	8 cut(s)	59, 85, 394, 652, 1324, 1493, 1820, 2201
BstH2I	RGCGCY	1 cut(s)	700
BstHHI	GCGC	2 cut(s)	699, 2089
BstKTI	GATC	5 cut(s)	103, 787, 900, 958, 1718
BstMAI	GTCTC	4 cut(s)	489, 960, 1613, 1919
BstMBI	GATC	5 cut(s)	100, 784, 897, 955, 1715
BstMWI	GCNNNNNNNGC	8 cut(s)	169, 178, 195, 575, 767, 1138, 1732, 2198
BstNI	CCWGG	1 cut(s)	1809
BstNSI	RCATGY	2 cut(s)	973, 1268
BstPI	GGTNACC	2 cut(s)	490, 2006
BstSCI	CCNGG	1 cut(s)	1807
BstSFI	CTRYAG	4 cut(s)	66, 567, 763, 893
BstSLI	GKGCMC	4 cut(s)	59, 566, 772, 1348
BstV1I	GCAGC	7 cut(s)	58, 824, 879, 1366, 1657, 1951, 2071
BstV2I	GAAGAC	2 cut(s)	738, 1868
BstX2I	RGATCY	4 cut(s)	100, 784, 897, 955
BstYI	RGATCY	4 cut(s)	100, 784, 897, 955
BsuI	GTATCC	1 cut(s)	1456
BtrI	CACGTC	1 cut(s)	46
BtsCI	GGATG	8 cut(s)	59, 85, 394, 652, 1324, 1493, 1820, 2201
BtsI	GCAGTG	1 cut(s)	564
BtsIMutI	CAGTG	8 cut(s)	564, 587, 814, 1176, 1348, 1579, 1977, 2091
BveI	ACCTGC	3 cut(s)	766, 1000, 2197
Cac8I	GCNNGC	9 cut(s)	183, 187, 517, 1119, 1266, 1755, 2022, 2174, 2178
CciI	TCATGA	1 cut(s)	375
CfoI	GCGC	2 cut(s)	699, 2089
Cfr10I	RCCGGY	1 cut(s)	1834
Cfr13I	GGNCC	9 cut(s)	283, 439, 538, 641, 768, 769, 1116, 1235, 1254
CseI	GACGC	1 cut(s)	1759
Csp6I	GTAC	3 cut(s)	497, 1301, 1838
CspAI	ACCGGT	1 cut(s)	1834
CviAII	CATG	7 cut(s)	376, 430, 970, 1100, 1265, 1415, 1935
CviQI	GTAC	3 cut(s)	497, 1301, 1838
DpnI	GATC	5 cut(s)	102, 786, 899, 957, 1717
DpnII	GATC	5 cut(s)	100, 784, 897, 955, 1715
DrdI	GACNNNNNNGTC	1 cut(s)	1979
DseDI	GACNNNNNNGTC	1 cut(s)	1979
Eam1104I	CTCTTC	1 cut(s)	333
EarI	CTCTTC	1 cut(s)	333
Ecl136II	GAGCTC	1 cut(s)	218
Eco130I	CCWWGG	3 cut(s)	1215, 1471, 2163
Eco24I	GRGCYC	3 cut(s)	220, 772, 832
Eco32I	GATATC	1 cut(s)	1003
Eco47I	GGWCC	3 cut(s)	283, 538, 1254
Eco47III	AGCGCT	1 cut(s)	698
Eco53kI	GAGCTC	1 cut(s)	218
Eco57I	CTGAAG	6 cut(s)	535, 732, 959, 1152, 1308, 1644
Eco72I	CACGTG	1 cut(s)	1399
Eco88I	CYCGRG	1 cut(s)	279
Eco91I	GGTNACC	2 cut(s)	490, 2006
EcoICRI	GAGCTC	1 cut(s)	218
EcoO109I	RGGNCCY	4 cut(s)	283, 538, 768, 769
EcoO65I	GGTNACC	2 cut(s)	490, 2006
EcoRII	CCWGG	1 cut(s)	1807
EcoRV	GATATC	1 cut(s)	1003
EcoT14I	CCWWGG	3 cut(s)	1215, 1471, 2163
EcoT22I	ATGCAT	1 cut(s)	1534
EcoT38I	GRGCYC	3 cut(s)	220, 772, 832
ErhI	CCWWGG	3 cut(s)	1215, 1471, 2163
FaeI	CATG	7 cut(s)	379, 433, 973, 1103, 1268, 1418, 1938
FaqI	GGGAC	2 cut(s)	296, 577
FatI	CATG	7 cut(s)	375, 429, 969, 1099, 1264, 1414, 1934
FauI	CCCGC	2 cut(s)	1126, 1357
FauNDI	CATATG	2 cut(s)	326, 824
FblI	GTMKAC	1 cut(s)	819
FokI	GGATG	7 cut(s)	46, 72, 381, 659, 1311, 1480, 1807
FriOI	GRGCYC	3 cut(s)	220, 772, 832
FspBI	CTAG	4 cut(s)	1185, 1515, 1584, 1761
GlaI	GCGC	2 cut(s)	698, 2088
GsuI	CTGGAG	2 cut(s)	368, 1871
HaeII	RGCGCY	1 cut(s)	700
HapII	CCGG	3 cut(s)	644, 1835, 1906
HgaI	GACGC	1 cut(s)	1759
HhaI	GCGC	2 cut(s)	699, 2089
Hin1I	GRCGYC	1 cut(s)	210
Hin1II	CATG	7 cut(s)	379, 433, 973, 1103, 1268, 1418, 1938
Hin6I	GCGC	2 cut(s)	697, 2087
HinP1I	GCGC	2 cut(s)	697, 2087
HinfI	GANTC	8 cut(s)	226, 628, 884, 1178, 1274, 1316, 1918, 2051
HpaII	CCGG	3 cut(s)	644, 1835, 1906
HphI	GGTGA	8 cut(s)	244, 367, 975, 1764, 1797, 2000, 2135, 2162
Hpy166II	GTNNAC	6 cut(s)	57, 271, 564, 820, 1049, 1257
Hpy188I	TCNGA	8 cut(s)	215, 389, 554, 743, 795, 965, 1903, 1917
Hpy8I	GTNNAC	6 cut(s)	57, 271, 564, 820, 1049, 1257
Hpy99I	CGWCG	3 cut(s)	47, 215, 949
HpyCH4III	ACNGT	8 cut(s)	496, 591, 654, 1203, 1300, 1343, 1842, 1981
HpyCH4IV	ACGT	3 cut(s)	45, 210, 1398
HpyF10VI	GCNNNNNNNGC	8 cut(s)	169, 178, 195, 575, 767, 1138, 1732, 2198
HpySE526I	ACGT	3 cut(s)	45, 210, 1398
Hsp92I	GRCGYC	1 cut(s)	210
Hsp92II	CATG	7 cut(s)	379, 433, 973, 1103, 1268, 1418, 1938
HspAI	GCGC	2 cut(s)	697, 2087
Kzo9I	GATC	5 cut(s)	100, 784, 897, 955, 1715
LmnI	GCTCC	9 cut(s)	178, 206, 215, 512, 1580, 1610, 1642, 1738, 1871
Lsp1109I	GCAGC	7 cut(s)	58, 824, 879, 1366, 1657, 1951, 2071
LweI	GCATC	6 cut(s)	403, 989, 1502, 1519, 1774, 2143
MaeI	CTAG	4 cut(s)	1185, 1515, 1584, 1761
MaeII	ACGT	3 cut(s)	45, 210, 1398
MalI	GATC	5 cut(s)	102, 786, 899, 957, 1717
MbiI	CCGCTC	1 cut(s)	201
MboI	GATC	5 cut(s)	100, 784, 897, 955, 1715
MflI	RGATCY	4 cut(s)	100, 784, 897, 955
MhlI	GDGCHC	7 cut(s)	51, 59, 220, 566, 772, 832, 1348
MluCI	AATT	5 cut(s)	119, 659, 1447, 1553, 1688
MlyI	GAGTC	3 cut(s)	893, 1927, 2045
MmeI	TCCRAC	1 cut(s)	193
Mph1103I	ATGCAT	1 cut(s)	1534
MroXI	GAANNNNTTC	2 cut(s)	1768, 2134
MseI	TTAA	3 cut(s)	1026, 1536, 1743
MslI	CAYNNNNRTG	5 cut(s)	399, 1010, 1413, 1419, 1527
MspA1I	CMGCKG	3 cut(s)	71, 185, 1648
MspCI	CTTAAG	1 cut(s)	1742
MspI	CCGG	3 cut(s)	644, 1835, 1906
MspR9I	CCNGG	1 cut(s)	1809
Mva1269I	GAATGC	4 cut(s)	872, 918, 1247, 1812
MvaI	CCWGG	1 cut(s)	1809
MwoI	GCNNNNNNNGC	8 cut(s)	169, 178, 195, 575, 767, 1138, 1732, 2198
NdeI	CATATG	2 cut(s)	326, 824
NdeII	GATC	5 cut(s)	100, 784, 897, 955, 1715
NlaIII	CATG	7 cut(s)	379, 433, 973, 1103, 1268, 1418, 1938
NlaIV	GGNNCC	7 cut(s)	82, 180, 284, 642, 770, 771, 1873
NmuCI	GTSAC	5 cut(s)	355, 406, 476, 1803, 2006
NsiI	ATGCAT	1 cut(s)	1534
NspI	RCATGY	2 cut(s)	973, 1268
OliI	CACNNNNGTG	1 cut(s)	1010
PaeI	GCATGC	1 cut(s)	1268
PagI	TCATGA	1 cut(s)	375
PaqCI	CACCTGC	2 cut(s)	766, 1000
PctI	GAATGC	4 cut(s)	872, 918, 1247, 1812
PdmI	GAANNNNTTC	2 cut(s)	1768, 2134
PfeI	GAWTC	5 cut(s)	226, 628, 1178, 1274, 1316
PflFI	GACNNNGTC	2 cut(s)	287, 1930
PinAI	ACCGGT	1 cut(s)	1834
PleI	GAGTC	3 cut(s)	892, 1926, 2045
PmaCI	CACGTG	1 cut(s)	1399
PmlI	CACGTG	1 cut(s)	1399
PpsI	GAGTC	3 cut(s)	892, 1926, 2045
Ppu21I	YACGTR	1 cut(s)	1399
PpuMI	RGGWCCY	2 cut(s)	283, 538
Psp124BI	GAGCTC	1 cut(s)	220
Psp5II	RGGWCCY	2 cut(s)	283, 538
Psp6I	CCWGG	1 cut(s)	1807
PspCI	CACGTG	1 cut(s)	1399
PspEI	GGTNACC	2 cut(s)	490, 2006
PspGI	CCWGG	1 cut(s)	1807
PspN4I	GGNNCC	7 cut(s)	82, 180, 284, 642, 770, 771, 1873
PspOMI	GGGCCC	1 cut(s)	768
PspPI	GGNCC	9 cut(s)	283, 439, 538, 641, 768, 769, 1116, 1235, 1254
PspPPI	RGGWCCY	2 cut(s)	283, 538
PstI	CTGCAG	2 cut(s)	571, 897
PsuI	RGATCY	4 cut(s)	100, 784, 897, 955
PsyI	GACNNNGTC	2 cut(s)	287, 1930
PvuII	CAGCTG	3 cut(s)	71, 185, 1648
RsaI	GTAC	3 cut(s)	498, 1302, 1839
RsaNI	GTAC	3 cut(s)	497, 1301, 1838
RseI	CAYNNNNRTG	5 cut(s)	399, 1010, 1413, 1419, 1527
SacI	GAGCTC	1 cut(s)	220
SaqAI	TTAA	3 cut(s)	1026, 1536, 1743
Sau3AI	GATC	5 cut(s)	100, 784, 897, 955, 1715
Sau96I	GGNCC	9 cut(s)	283, 439, 538, 641, 768, 769, 1116, 1235, 1254
SchI	GAGTC	3 cut(s)	893, 1927, 2045
ScrFI	CCNGG	1 cut(s)	1809
SduI	GDGCHC	7 cut(s)	51, 59, 220, 566, 772, 832, 1348
SfaNI	GCATC	6 cut(s)	403, 989, 1502, 1519, 1774, 2143
SfcI	CTRYAG	4 cut(s)	66, 567, 763, 893
SfiI	GGCCNNNNNGGCC	1 cut(s)	195
SinI	GGWCC	3 cut(s)	283, 538, 1254
SmiMI	CAYNNNNRTG	5 cut(s)	399, 1010, 1413, 1419, 1527
SmlI	CTYRAG	2 cut(s)	221, 1742
SmoI	CTYRAG	2 cut(s)	221, 1742
SpeI	ACTAGT	1 cut(s)	1514
SphI	GCATGC	1 cut(s)	1268
Sse9I	AATT	5 cut(s)	119, 659, 1447, 1553, 1688
SsiI	CCGC	8 cut(s)	74, 199, 442, 1119, 1238, 1350, 1758, 1824
SspI	AATATT	2 cut(s)	473, 2134
SspMI	CTAG	4 cut(s)	1185, 1515, 1584, 1761
SstI	GAGCTC	1 cut(s)	220
StyD4I	CCNGG	1 cut(s)	1807
StyI	CCWWGG	3 cut(s)	1215, 1471, 2163
TaaI	ACNGT	8 cut(s)	496, 591, 654, 1203, 1300, 1343, 1842, 1981
TaiI	ACGT	3 cut(s)	48, 213, 1401
TaqI	TCGA	4 cut(s)	192, 501, 876, 947
TasI	AATT	5 cut(s)	119, 659, 1447, 1553, 1688
TauI	GCSGC	5 cut(s)	77, 201, 444, 1240, 1760
TfiI	GAWTC	5 cut(s)	226, 628, 1178, 1274, 1316
Tru1I	TTAA	3 cut(s)	1026, 1536, 1743
Tru9I	TTAA	3 cut(s)	1026, 1536, 1743
TscAI	CASTG	8 cut(s)	571, 594, 814, 1176, 1348, 1579, 1984, 2098
TseFI	GTSAC	5 cut(s)	355, 406, 476, 1803, 2006
TseI	GCWGC	7 cut(s)	71, 837, 892, 1379, 1645, 1939, 2084
Tsp45I	GTSAC	5 cut(s)	355, 406, 476, 1803, 2006
TspDTI	ATGAA	5 cut(s)	133, 351, 392, 1116, 1431
TspGWI	ACGGA	3 cut(s)	78, 361, 1985
TspRI	CASTG	8 cut(s)	571, 594, 814, 1176, 1348, 1579, 1984, 2098
Tth111I	GACNNNGTC	2 cut(s)	287, 1930
Vha464I	CTTAAG	1 cut(s)	1742
VneI	GTGCAC	2 cut(s)	55, 562
VpaK11BI	GGWCC	3 cut(s)	283, 538, 1254
XapI	RAATTY	3 cut(s)	1447, 1553, 1688
XceI	RCATGY	2 cut(s)	973, 1268
XcmI	CCANNNNNNNNNTGG	2 cut(s)	433, 2039
XmiI	GTMKAC	1 cut(s)	819
XmnI	GAANNNNTTC	2 cut(s)	1768, 2134
XspI	CTAG	4 cut(s)	1185, 1515, 1584, 1761
ZraI	GACGTC	1 cut(s)	211
Zsp2I	ATGCAT	1 cut(s)	1534

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.