Uncharacterized protein family, UPF0114
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13720 |
| fragaria_vesca | FvH4_7g01620 FvH4_7g01620 |
| malus_domestica | MD02G1302400.v1.1 MD07G1021700.v1.1 |
| prunus_persica | Prupe.2G021800_v2.0.a1 Prupe.2G021800_v2.0.a1 |
| pyrus_communis | pycom02g25470 pycom07g01640 |
| rosa_chinensis | RchiOBHm_Chr1g0317891 |
| rosa_laevigata | RLG00000030579 |
| rosa_multiflora | Rmu_co8203290.1_g000001 Rmu_sc0000654.1_g000020 Rmu_sc0000654.1_g000031 Rmu_sc0000654.1_g000043 Rmu_sc0000654.1_g000053 Rmu_sc0000772.1_g000028 Rmu_sc0002922.1_g000003 Rmu_sc0002922.1_g000004 Rmu_sc0011228.1_g000005 |
| rosa_roxburghii | Rroxscaffold_4G00330150 |
| rosa_rugosa | Rorug01G0018400 |
| rosa_samantha | Rh1AG029900 Rh1BG025900 Rh1CG027100 Rh1CG027600 Rh1CG028500 Rh1DG041600 Rh1DG042600 |
| rosa_wichuraiana | Rw1G002250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 97 |
| AgsI | TTSAA | 3 cut(s) | 85, 118, 163 |
| AluBI | AGCT | 1 cut(s) | 147 |
| AluI | AGCT | 1 cut(s) | 147 |
| AlwI | GGATC | 1 cut(s) | 97 |
| AoxI | GGCC | 1 cut(s) | 125 |
| BbsI | GAAGAC | 1 cut(s) | 170 |
| BpiI | GAAGAC | 1 cut(s) | 170 |
| BseGI | GGATG | 1 cut(s) | 141 |
| BshFI | GGCC | 1 cut(s) | 127 |
| BsnI | GGCC | 1 cut(s) | 127 |
| Bsp143I | GATC | 2 cut(s) | 73, 89 |
| BspANI | GGCC | 1 cut(s) | 127 |
| BspHI | TCATGA | 1 cut(s) | 189 |
| BspPI | GGATC | 1 cut(s) | 97 |
| BssMI | GATC | 2 cut(s) | 73, 89 |
| BstF5I | GGATG | 1 cut(s) | 141 |
| BstKTI | GATC | 2 cut(s) | 76, 92 |
| BstMBI | GATC | 2 cut(s) | 73, 89 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 77 |
| BstNSI | RCATGY | 1 cut(s) | 182 |
| BstV2I | GAAGAC | 1 cut(s) | 170 |
| BstX2I | RGATCY | 1 cut(s) | 89 |
| BstYI | RGATCY | 1 cut(s) | 89 |
| BsuRI | GGCC | 1 cut(s) | 127 |
| BtsCI | GGATG | 1 cut(s) | 141 |
| CciI | TCATGA | 1 cut(s) | 189 |
| CviAII | CATG | 2 cut(s) | 179, 190 |
| CviJI | RGCY | 2 cut(s) | 127, 147 |
| CviKI_1 | RGCY | 2 cut(s) | 127, 147 |
| DpnI | GATC | 2 cut(s) | 75, 91 |
| DpnII | GATC | 2 cut(s) | 73, 89 |
| Eco147I | AGGCCT | 1 cut(s) | 127 |
| FaeI | CATG | 2 cut(s) | 182, 193 |
| FaiI | YATR | 4 cut(s) | 17, 27, 180, 191 |
| FatI | CATG | 2 cut(s) | 178, 189 |
| FokI | GGATG | 1 cut(s) | 148 |
| HaeIII | GGCC | 1 cut(s) | 127 |
| Hin1II | CATG | 2 cut(s) | 182, 193 |
| HinfI | GANTC | 1 cut(s) | 193 |
| Hpy188III | TCNNGA | 1 cut(s) | 190 |
| HpyAV | CCTTC | 3 cut(s) | 72, 79, 112 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 77 |
| Hsp92II | CATG | 2 cut(s) | 182, 193 |
| Kzo9I | GATC | 2 cut(s) | 73, 89 |
| MalI | GATC | 2 cut(s) | 75, 91 |
| MboI | GATC | 2 cut(s) | 73, 89 |
| MboII | GAAGA | 2 cut(s) | 84, 175 |
| MflI | RGATCY | 1 cut(s) | 89 |
| MluCI | AATT | 2 cut(s) | 141, 158 |
| MnlI | CCTC | 1 cut(s) | 117 |
| MseI | TTAA | 1 cut(s) | 5 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 77 |
| NdeII | GATC | 2 cut(s) | 73, 89 |
| NlaIII | CATG | 2 cut(s) | 182, 193 |
| NspI | RCATGY | 1 cut(s) | 182 |
| PagI | TCATGA | 1 cut(s) | 189 |
| PceI | AGGCCT | 1 cut(s) | 127 |
| PfeI | GAWTC | 1 cut(s) | 193 |
| PsuI | RGATCY | 1 cut(s) | 89 |
| SaqAI | TTAA | 1 cut(s) | 5 |
| Sau3AI | GATC | 2 cut(s) | 73, 89 |
| SetI | ASST | 1 cut(s) | 149 |
| SgeI | CNNG | 3 cut(s) | 89, 164, 191 |
| Sse9I | AATT | 2 cut(s) | 141, 158 |
| SseBI | AGGCCT | 1 cut(s) | 127 |
| SspI | AATATT | 1 cut(s) | 9 |
| StuI | AGGCCT | 1 cut(s) | 127 |
| TasI | AATT | 2 cut(s) | 141, 158 |
| TfiI | GAWTC | 1 cut(s) | 193 |
| Tru1I | TTAA | 1 cut(s) | 5 |
| Tru9I | TTAA | 1 cut(s) | 5 |
| TspDTI | ATGAA | 2 cut(s) | 152, 171 |
| XceI | RCATGY | 1 cut(s) | 182 |