Uncharacterized protein family, UPF0114
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13720 |
| fragaria_vesca | FvH4_7g01620 FvH4_7g01620 |
| malus_domestica | MD02G1302400.v1.1 MD07G1021700.v1.1 |
| prunus_persica | Prupe.2G021800_v2.0.a1 Prupe.2G021800_v2.0.a1 |
| pyrus_communis | pycom02g25470 pycom07g01640 |
| rosa_chinensis | RchiOBHm_Chr1g0317891 |
| rosa_laevigata | RLG00000030579 |
| rosa_multiflora | Rmu_co8203290.1_g000001 Rmu_sc0000654.1_g000020 Rmu_sc0000654.1_g000031 Rmu_sc0000654.1_g000043 Rmu_sc0000654.1_g000053 Rmu_sc0000772.1_g000028 Rmu_sc0002922.1_g000003 Rmu_sc0002922.1_g000004 Rmu_sc0011228.1_g000005 |
| rosa_roxburghii | Rroxscaffold_4G00330150 |
| rosa_rugosa | Rorug01G0018400 |
| rosa_samantha | Rh1AG029900 Rh1BG025900 Rh1CG027100 Rh1CG027600 Rh1CG028500 Rh1DG041600 Rh1DG042600 |
| rosa_wichuraiana | Rw1G002250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 131 |
| AclWI | GGATC | 1 cut(s) | 38 |
| AcsI | RAATTY | 1 cut(s) | 8 |
| AfaI | GTAC | 1 cut(s) | 158 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 166, 204 |
| AgsI | TTSAA | 1 cut(s) | 7 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 178 |
| AjnI | CCWGG | 1 cut(s) | 47 |
| Alw26I | GTCTC | 1 cut(s) | 21 |
| AlwI | GGATC | 1 cut(s) | 38 |
| ApeKI | GCWGC | 1 cut(s) | 152 |
| ApoI | RAATTY | 1 cut(s) | 8 |
| AspLEI | GCGC | 1 cut(s) | 132 |
| AsuHPI | GGTGA | 1 cut(s) | 104 |
| BbsI | GAAGAC | 1 cut(s) | 177 |
| BbvI | GCAGC | 1 cut(s) | 139 |
| BciT130I | CCWGG | 1 cut(s) | 49 |
| BcoDI | GTCTC | 1 cut(s) | 21 |
| BisI | GCNGC | 1 cut(s) | 153 |
| BlsI | GCNGC | 1 cut(s) | 154 |
| Bme1390I | CCNGG | 1 cut(s) | 49 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 178 |
| BmrFI | CCNGG | 1 cut(s) | 49 |
| BpiI | GAAGAC | 1 cut(s) | 177 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 158, 190 |
| BsaJI | CCNNGG | 2 cut(s) | 47, 48 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 166, 204 |
| Bse3DI | GCAATG | 1 cut(s) | 107 |
| BseBI | CCWGG | 1 cut(s) | 49 |
| BseDI | CCNNGG | 2 cut(s) | 47, 48 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 166, 204 |
| BseMI | GCAATG | 1 cut(s) | 107 |
| BseXI | GCAGC | 1 cut(s) | 139 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 166, 204 |
| BsmAI | GTCTC | 1 cut(s) | 21 |
| Bsp143I | GATC | 1 cut(s) | 43 |
| BspPI | GGATC | 1 cut(s) | 38 |
| BsrDI | GCAATG | 1 cut(s) | 107 |
| BssECI | CCNNGG | 2 cut(s) | 47, 48 |
| BssMI | GATC | 1 cut(s) | 43 |
| Bst2UI | CCWGG | 1 cut(s) | 49 |
| BstDEI | CTNAG | 1 cut(s) | 107 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 164 |
| BstHHI | GCGC | 1 cut(s) | 132 |
| BstKTI | GATC | 1 cut(s) | 46 |
| BstMAI | GTCTC | 1 cut(s) | 21 |
| BstMBI | GATC | 1 cut(s) | 43 |
| BstNI | CCWGG | 1 cut(s) | 49 |
| BstSCI | CCNGG | 1 cut(s) | 47 |
| BstV1I | GCAGC | 1 cut(s) | 139 |
| BstV2I | GAAGAC | 1 cut(s) | 177 |
| CfoI | GCGC | 1 cut(s) | 132 |
| Csp6I | GTAC | 1 cut(s) | 157 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 184 |
| CviAII | CATG | 1 cut(s) | 183 |
| CviJI | RGCY | 2 cut(s) | 62, 152 |
| CviKI_1 | RGCY | 2 cut(s) | 62, 152 |
| CviQI | GTAC | 1 cut(s) | 157 |
| DdeI | CTNAG | 1 cut(s) | 107 |
| DpnI | GATC | 1 cut(s) | 45 |
| DpnII | GATC | 1 cut(s) | 43 |
| DriI | GACNNNNNGTC | 1 cut(s) | 178 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 178 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 164 |
| EcoRII | CCWGG | 1 cut(s) | 47 |
| FaeI | CATG | 1 cut(s) | 186 |
| FaiI | YATR | 7 cut(s) | 69, 90, 140, 146, 165, 184, 211 |
| FatI | CATG | 1 cut(s) | 182 |
| Fnu4HI | GCNGC | 1 cut(s) | 153 |
| Fsp4HI | GCNGC | 1 cut(s) | 153 |
| FspI | TGCGCA | 1 cut(s) | 131 |
| GlaI | GCGC | 1 cut(s) | 131 |
| GluI | GCNGC | 1 cut(s) | 153 |
| HhaI | GCGC | 1 cut(s) | 132 |
| Hin1II | CATG | 1 cut(s) | 186 |
| Hin6I | GCGC | 1 cut(s) | 130 |
| HinP1I | GCGC | 1 cut(s) | 130 |
| HinfI | GANTC | 1 cut(s) | 173 |
| HphI | GGTGA | 1 cut(s) | 104 |
| HpyCH4V | TGCA | 1 cut(s) | 100 |
| HpyF3I | CTNAG | 1 cut(s) | 107 |
| Hsp92II | CATG | 1 cut(s) | 186 |
| HspAI | GCGC | 1 cut(s) | 130 |
| Kzo9I | GATC | 1 cut(s) | 43 |
| LpnPI | CCDG | 4 cut(s) | 34, 61, 173, 211 |
| Lsp1109I | GCAGC | 1 cut(s) | 139 |
| MalI | GATC | 1 cut(s) | 45 |
| MboI | GATC | 1 cut(s) | 43 |
| MboII | GAAGA | 3 cut(s) | 65, 181, 182 |
| MluCI | AATT | 2 cut(s) | 8, 95 |
| MlyI | GAGTC | 1 cut(s) | 167 |
| MnlI | CCTC | 1 cut(s) | 160 |
| MspR9I | CCNGG | 1 cut(s) | 49 |
| MvaI | CCWGG | 1 cut(s) | 49 |
| NdeII | GATC | 1 cut(s) | 43 |
| NlaIII | CATG | 1 cut(s) | 186 |
| NsbI | TGCGCA | 1 cut(s) | 131 |
| PasI | CCCWGGG | 1 cut(s) | 48 |
| PkrI | GCNGC | 1 cut(s) | 154 |
| PleI | GAGTC | 1 cut(s) | 167 |
| PpsI | GAGTC | 1 cut(s) | 167 |
| Psp6I | CCWGG | 1 cut(s) | 47 |
| PspGI | CCWGG | 1 cut(s) | 47 |
| RsaI | GTAC | 1 cut(s) | 158 |
| RsaNI | GTAC | 1 cut(s) | 157 |
| SatI | GCNGC | 1 cut(s) | 153 |
| Sau3AI | GATC | 1 cut(s) | 43 |
| SchI | GAGTC | 1 cut(s) | 167 |
| ScrFI | CCNGG | 1 cut(s) | 49 |
| SetI | ASST | 3 cut(s) | 138, 162, 200 |
| SgeI | CNNG | 8 cut(s) | 34, 60, 61, 75, 145, 172, 195, 210 |
| Sse9I | AATT | 2 cut(s) | 8, 95 |
| StyD4I | CCNGG | 1 cut(s) | 47 |
| TasI | AATT | 2 cut(s) | 8, 95 |
| TseI | GCWGC | 1 cut(s) | 152 |
| TspGWI | ACGGA | 1 cut(s) | 48 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 164 |
| XapI | RAATTY | 1 cut(s) | 8 |