Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000677.1

Orthogroup ID

OG0002464

Physical Location & Seq

Genomic Coordinates Forward (+)

139461 .. 142766

Gene Structure 3306 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000677.1_g000024.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

atgggtatgttggggcttgttatccgagtaagtttattcttgttattgttcttggtatgttctacccctccggaggaccacatcaagtgttcatcgtcaaacaacacaaactgcaccatcacaaactcctacggcatcttccccgatcgaactgtctgtaaagcgactagtgtatcataccctagtacggaggaagaactcgttaaggtagtggctgatgcaaccaaaaacaagaagagcatgaaggtggcgactcgttactcccacagcattcccaagctggtttgcccgcgcggcgaagatgggctgatcataagcaccaacaacctcaaccgtgtggttaaggtcgacgttgaagggatgacgatgacggtggagagcggcgtgacgcttaggcaggtgatcagtgaggctgccaaagttggcttggcgttgccatacgcaccatattggtgggggctaactgtcggtgggttgctagggactggtgcgcatggaagcacattatgggctaagggaagcgctgttcatgattatgtggtgggacttaggattgtgagtccaggagggcccgaagatggtcatgtcaaggtgagaagtctcagtcaaggtgataaagatcttaatgcagctaaggtttcacttggagtcttaggagtaatatcacaggttactctaaacctacaacccatgttcaagaggtccatcacatatttgagcaagaacgattctgacttgggagatcaagtgcttacgtttggcaagcagcatgagtttgcagacatattatggtatcctagccagcacaaggcagtttatcgagtagatgatcgtatctcctcaaacacatccggaaatggtttttatgatttccttccttttcgagcaacaccttcacttgcactggcagttataagaacggcagaagagaaccaagaatcaaaaagcgatgctgatgggaaatgctctggggcaaagttggtcacatctgggcttctatccaatgcttatggtttgacaaacaatggtataatctttactggttatcctgtgattggatatcagaaccggcttcaagcatctggaacttgccttgatagtcttcaagattcaagaatcacggcatgcgcatgggacccaaggatcaaaggcgagttttttcatcaaacaaccttcagcatcagcttgtccgtggccaaaagcttcattcaagacgtgcagaagctagttgagattgaacccaaatccctctgtggagtagaaatctacaatggaatcctaatgcgctatgtcaccgcatcaactgcttaccttggcaaacaagtagatgcaattgacttcgacatcacttattaccgaagcaaggaccccatgacgcctaggctccatgaaggcatacttgaagaaatagagcaattggcactgtttaagtacggagcattgccacattggggaaagaataggaacatagcctttgatggggtgatgaagaagtacaaaaatggtaaggagttcttgagggctaaggaagtgtatgacccaatggggctattctcaagtgaatggagtgaccaggtccttggaattaagggtgaggttaacttagtcaaggaagggtgcgccctagaagggttgtgcatttgctcagaagacattcattgtgccccaagcaagggctacttctgtagaccggggaaagtatttagggatgcaaggatctgtactccgatccataattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005618 GO:0005623 GO:0005975 GO:0005996 GO:0006082 GO:0006732 GO:0006766 GO:0006767 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009110 GO:0009987 GO:0016051 GO:0016053 GO:0016491 GO:0016614 GO:0016899 GO:0019752 GO:0019852 GO:0019853 GO:0030312 GO:0036094 GO:0042364 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044464 GO:0046364 GO:0046394 GO:0048037 GO:0050105 GO:0050660 GO:0050662 GO:0051186 GO:0051188 GO:0055114 GO:0071704 GO:0071944 GO:0097159 GO:1901265 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ALO FAD_binding_4

Protein Analysis

579

Amino Acids

63.49

Weight (kDa)

8.05

Isoelectric Point (pI)

30.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002464)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46750 AT2G46760 AT5G56470
fragaria_vesca	FvH4_7g17510 FvH4_7g17511
malus_domestica	MD01G1087800.v1.1 MD07G1157900.v1.1
prunus_persica	Prupe.2G196400_v2.0.a1
pyrus_communis	pycom01g11170 pycom07g15450
rosa_chinensis	RchiOBHm_Chr1g0360921 RchiOBHm_Chr1g0360951 RchiOBHm_Chr3g0481291 RchiOBHm_Chr5g0029651
rosa_laevigata	RLG00000019622 RLG00000027767 RLG00000027769
rosa_multiflora	Rmu_sc0000206.1_g000019 Rmu_sc0000677.1_g000024 Rmu_sc0002207.1_g000003 Rmu_sc0008012.1_g000002
rosa_roxburghii	Rroxscaffold_3G00228090 Rroxscaffold_4G00295680 Rroxscaffold_4G00295700 Rroxscaffold_5G00385060
rosa_rugosa	Rorug01G0283500 Rorug01G0283800 Rorug03G0191000
rosa_samantha	Rh1AG295000 Rh1BG259800 Rh1BG259900 Rh1CG277200 Rh1DG289900 Rh2BG393900 Rh3AG241900 Rh3BG277100 Rh3DG268900
rosa_wichuraiana	Rw1G026070 Rw1G026100 Rw1G026110 Rw3G021610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	914
AarI	CACCTGC	1 cut(s)	388
Acc16I	TGCGCA	2 cut(s)	492, 1129
Acc36I	ACCTGC	1 cut(s)	388
AccBSI	CCGCTC	1 cut(s)	381
AccI	GTMKAC	2 cut(s)	348, 1687
AccII	CGCG	2 cut(s)	292, 294
AccIII	TCCGGA	2 cut(s)	70, 851
AciI	CCGC	4 cut(s)	290, 294, 381, 1296
AclWI	GGATC	3 cut(s)	1151, 1723, 1724
AcoI	YGGCCR	1 cut(s)	1194
AcuI	CTGAAG	1 cut(s)	1159
AcyI	GRCGYC	1 cut(s)	1376
AfaI	GTAC	4 cut(s)	187, 1433, 1496, 1723
AfeI	AGCGCT	1 cut(s)	523
AgsI	TTSAA	8 cut(s)	356, 697, 1076, 1106, 1113, 1211, 1238, 1403
AhlI	ACTAGT	1 cut(s)	167
AjiI	CACGTC	1 cut(s)	1216
AjnI	CCWGG	2 cut(s)	562, 1572
AloI	GAACNNNNNNTCC	2 cut(s)	510, 542
AluBI	AGCT	5 cut(s)	280, 632, 1185, 1203, 1225
AluI	AGCT	5 cut(s)	280, 632, 1185, 1203, 1225
Alw26I	GTCTC	1 cut(s)	605
AlwI	GGATC	3 cut(s)	1151, 1723, 1724
Aor13HI	TCCGGA	2 cut(s)	70, 851
Aor51HI	AGCGCT	1 cut(s)	523
AoxI	GGCC	2 cut(s)	569, 1194
ApaI	GGGCCC	1 cut(s)	573
ApeKI	GCWGC	3 cut(s)	413, 629, 766
Asp700I	GAANNNNTTC	1 cut(s)	1653
AspA2I	CCTAGG	1 cut(s)	1379
AspLEI	GCGC	6 cut(s)	294, 493, 524, 1130, 1287, 1622
AspS9I	GGNCC	7 cut(s)	76, 569, 570, 702, 1135, 1366, 1576
AsuC2I	CCSGG	1 cut(s)	1692
AsuHPI	GGTGA	6 cut(s)	412, 604, 623, 1285, 1495, 1604
AvaII	GGWCC	5 cut(s)	76, 702, 1135, 1366, 1576
AvrII	CCTAGG	1 cut(s)	1379
BaeGI	GKGCMC	2 cut(s)	573, 1666
BaeI	ACNNNNGTAYC	2 cut(s)	156, 189
BalI	TGGCCA	1 cut(s)	1196
BanII	GRGCYC	1 cut(s)	573
BbsI	GAAGAC	2 cut(s)	1094, 1656
BbvI	GCAGC	3 cut(s)	400, 641, 778
BccI	CCATC	6 cut(s)	125, 296, 572, 713, 950, 1472
BceAI	ACGGC	3 cut(s)	148, 936, 1137
BciT130I	CCWGG	2 cut(s)	564, 1574
BciVI	GTATCC	1 cut(s)	804
BclI	TGATCA	2 cut(s)	309, 402
BcnI	CCSGG	1 cut(s)	1692
BcoDI	GTCTC	1 cut(s)	605
BcuI	ACTAGT	1 cut(s)	167
BfaI	CTAG	7 cut(s)	168, 183, 479, 798, 1226, 1380, 1625
BfmI	CTRYAG	1 cut(s)	1684
BfoI	RGCGCY	1 cut(s)	525
BfuAI	ACCTGC	1 cut(s)	388
BfuI	GTATCC	1 cut(s)	804
BglI	GCCNNNNNGGC	1 cut(s)	294
BglII	AGATCT	1 cut(s)	619
BisI	GCNGC	5 cut(s)	295, 382, 414, 630, 767
BlnI	CCTAGG	1 cut(s)	1379
BlsI	GCNGC	5 cut(s)	296, 383, 415, 631, 768
Bme1390I	CCNGG	3 cut(s)	564, 1574, 1692
Bme18I	GGWCC	5 cut(s)	76, 702, 1135, 1366, 1576
BmgBI	CACGTC	1 cut(s)	1216
BmgT120I	GGNCC	7 cut(s)	76, 569, 570, 702, 1135, 1366, 1576
BmiI	GGNNCC	5 cut(s)	571, 1136, 1137, 1368, 1385
BmrFI	CCNGG	3 cut(s)	564, 1574, 1692
BmsI	GCATC	8 cut(s)	144, 208, 940, 1088, 1188, 1307, 1318, 1699
BpiI	GAAGAC	2 cut(s)	1094, 1656
Bpu10I	CCTNAGC	4 cut(s)	392, 513, 633, 1524
BpuEI	CTTGAG	2 cut(s)	1537, 1540
BpuMI	CCSGG	1 cut(s)	1692
BsaBI	GATNNNNATC	1 cut(s)	618
BsaHI	GRCGYC	1 cut(s)	1376
BsaJI	CCNNGG	6 cut(s)	1139, 1191, 1312, 1379, 1579, 1691
BsaWI	WCCGGW	2 cut(s)	70, 851
BsaXI	ACNNNNNCTCC	2 cut(s)	732, 762
Bse118I	RCCGGY	1 cut(s)	1068
Bse1I	ACTGG	3 cut(s)	490, 909, 1045
Bse3DI	GCAATG	1 cut(s)	1439
Bse8I	GATNNNNATC	1 cut(s)	618
BseAI	TCCGGA	2 cut(s)	70, 851
BseBI	CCWGG	2 cut(s)	564, 1574
BseDI	CCNNGG	6 cut(s)	1139, 1191, 1312, 1379, 1579, 1691
BseGI	GGATG	3 cut(s)	366, 848, 1714
BseJI	GATNNNNATC	1 cut(s)	618
BseMI	GCAATG	1 cut(s)	1439
BseMII	CTCAG	2 cut(s)	616, 1659
BseNI	ACTGG	3 cut(s)	490, 909, 1045
BseRI	GAGGAG	1 cut(s)	829
BseSI	GKGCMC	2 cut(s)	573, 1666
BseXI	GCAGC	3 cut(s)	400, 641, 778
BsgI	GTGCAG	2 cut(s)	97, 1238
Bsh1236I	CGCG	2 cut(s)	292, 294
Bsh1285I	CGRYCG	1 cut(s)	148
BshFI	GGCC	2 cut(s)	571, 1196
BsiEI	CGRYCG	1 cut(s)	148
BsiSI	CCGG	4 cut(s)	71, 852, 1069, 1691
BslFI	GGGAC	3 cut(s)	496, 558, 1148
BsmAI	GTCTC	1 cut(s)	605
BsmFI	GGGAC	3 cut(s)	496, 558, 1148
BsmI	GAATGC	1 cut(s)	270
BsnI	GGCC	2 cut(s)	571, 1196
Bsp120I	GGGCCC	1 cut(s)	569
Bsp1286I	GDGCHC	2 cut(s)	573, 1666
Bsp13I	TCCGGA	2 cut(s)	70, 851
Bsp143I	GATC	9 cut(s)	145, 309, 402, 619, 742, 829, 1143, 1716, 1728
BspACI	CCGC	4 cut(s)	290, 294, 381, 1296
BspANI	GGCC	2 cut(s)	571, 1196
BspCNI	CTCAG	2 cut(s)	615, 1658
BspEI	TCCGGA	2 cut(s)	70, 851
BspFNI	CGCG	2 cut(s)	292, 294
BspHI	TCATGA	1 cut(s)	529
BspLI	GGNNCC	5 cut(s)	571, 1136, 1137, 1368, 1385
BspMI	ACCTGC	1 cut(s)	388
BspPI	GGATC	3 cut(s)	1151, 1723, 1724
BspQI	GCTCTTC	1 cut(s)	230
BsrBI	CCGCTC	1 cut(s)	381
BsrDI	GCAATG	1 cut(s)	1439
BsrFI	RCCGGY	1 cut(s)	1068
BsrI	ACTGG	3 cut(s)	490, 909, 1045
BssAI	RCCGGY	1 cut(s)	1068
BssECI	CCNNGG	6 cut(s)	1139, 1191, 1312, 1379, 1579, 1691
BssMI	GATC	9 cut(s)	145, 309, 402, 619, 742, 829, 1143, 1716, 1728
BssNI	GRCGYC	1 cut(s)	1376
BssT1I	CCWWGG	4 cut(s)	1139, 1312, 1379, 1579
Bst2UI	CCWGG	2 cut(s)	564, 1574
Bst4CI	ACNGT	5 cut(s)	154, 335, 373, 466, 1425
Bst6I	CTCTTC	2 cut(s)	230, 921
BstACI	GRCGYC	1 cut(s)	1376
BstAPI	GCANNNNNTGC	1 cut(s)	1304
BstC8I	GCNNGC	4 cut(s)	290, 764, 803, 1126
BstDEI	CTNAG	9 cut(s)	392, 513, 548, 602, 633, 652, 1524, 1603, 1645
BstDSI	CCRYGG	1 cut(s)	1191
BstF5I	GGATG	3 cut(s)	366, 848, 1714
BstFNI	CGCG	2 cut(s)	292, 294
BstH2I	RGCGCY	1 cut(s)	525
BstHHI	GCGC	6 cut(s)	294, 493, 524, 1130, 1287, 1622
BstKTI	GATC	9 cut(s)	148, 312, 405, 622, 745, 832, 1146, 1719, 1731
BstMAI	GTCTC	1 cut(s)	605
BstMBI	GATC	9 cut(s)	145, 309, 402, 619, 742, 829, 1143, 1716, 1728
BstMCI	CGRYCG	1 cut(s)	148
BstMWI	GCNNNNNNNGC	2 cut(s)	294, 1304
BstNI	CCWGG	2 cut(s)	564, 1574
BstNSI	RCATGY	1 cut(s)	1128
BstSCI	CCNGG	3 cut(s)	562, 1572, 1690
BstSFI	CTRYAG	1 cut(s)	1684
BstSLI	GKGCMC	2 cut(s)	573, 1666
BstUI	CGCG	2 cut(s)	292, 294
BstV1I	GCAGC	3 cut(s)	400, 641, 778
BstV2I	GAAGAC	2 cut(s)	1094, 1656
BstX2I	RGATCY	2 cut(s)	619, 1716
BstXI	CCANNNNNNTGG	2 cut(s)	453, 1580
BstYI	RGATCY	2 cut(s)	619, 1716
BsuI	GTATCC	1 cut(s)	804
BsuRI	GGCC	2 cut(s)	571, 1196
BtgI	CCRYGG	1 cut(s)	1191
BtgZI	GCGATG	1 cut(s)	963
BtrI	CACGTC	1 cut(s)	1216
BtsCI	GGATG	3 cut(s)	366, 848, 1714
BtsIMutI	CAGTG	3 cut(s)	412, 902, 1421
BveI	ACCTGC	1 cut(s)	388
Cac8I	GCNNGC	4 cut(s)	290, 764, 803, 1126
CciI	TCATGA	1 cut(s)	529
CfoI	GCGC	6 cut(s)	294, 493, 524, 1130, 1287, 1622
Cfr10I	RCCGGY	1 cut(s)	1068
Cfr13I	GGNCC	7 cut(s)	76, 569, 570, 702, 1135, 1366, 1576
CseI	GACGC	2 cut(s)	397, 1384
CsiI	ACCWGGT	1 cut(s)	1572
Csp6I	GTAC	4 cut(s)	186, 1432, 1495, 1722
CviQI	GTAC	4 cut(s)	186, 1432, 1495, 1722
DdeI	CTNAG	9 cut(s)	392, 513, 548, 602, 633, 652, 1524, 1603, 1645
DpnI	GATC	9 cut(s)	147, 311, 404, 621, 744, 831, 1145, 1718, 1730
DpnII	GATC	9 cut(s)	145, 309, 402, 619, 742, 829, 1143, 1716, 1728
EaeI	YGGCCR	1 cut(s)	1194
Eam1104I	CTCTTC	2 cut(s)	230, 921
EarI	CTCTTC	2 cut(s)	230, 921
Eco130I	CCWWGG	4 cut(s)	1139, 1312, 1379, 1579
Eco24I	GRGCYC	1 cut(s)	573
Eco32I	GATATC	1 cut(s)	1061
Eco47I	GGWCC	5 cut(s)	76, 702, 1135, 1366, 1576
Eco47III	AGCGCT	1 cut(s)	523
Eco57I	CTGAAG	1 cut(s)	1159
EcoO109I	RGGNCCY	4 cut(s)	569, 1135, 1366, 1576
EcoRII	CCWGG	2 cut(s)	562, 1572
EcoRV	GATATC	1 cut(s)	1061
EcoT14I	CCWWGG	4 cut(s)	1139, 1312, 1379, 1579
EcoT38I	GRGCYC	1 cut(s)	573
ErhI	CCWWGG	4 cut(s)	1139, 1312, 1379, 1579
FalI	AAGNNNNNCTT	6 cut(s)	1383, 1415, 1499, 1531, 1664, 1696
FaqI	GGGAC	3 cut(s)	496, 558, 1148
FauI	CCCGC	1 cut(s)	297
FbaI	TGATCA	2 cut(s)	309, 402
FblI	GTMKAC	2 cut(s)	348, 1687
Fnu4HI	GCNGC	5 cut(s)	295, 382, 414, 630, 767
FokI	GGATG	3 cut(s)	373, 835, 1721
FriOI	GRGCYC	1 cut(s)	573
Fsp4HI	GCNGC	5 cut(s)	295, 382, 414, 630, 767
FspAI	RTGCGCAY	2 cut(s)	492, 1129
FspBI	CTAG	7 cut(s)	168, 183, 479, 798, 1226, 1380, 1625
FspI	TGCGCA	2 cut(s)	492, 1129
GlaI	GCGC	6 cut(s)	293, 492, 523, 1129, 1286, 1621
GluI	GCNGC	5 cut(s)	295, 382, 414, 630, 767
HaeII	RGCGCY	1 cut(s)	525
HaeIII	GGCC	2 cut(s)	571, 1196
HapII	CCGG	4 cut(s)	71, 852, 1069, 1691
HgaI	GACGC	2 cut(s)	397, 1384
HhaI	GCGC	6 cut(s)	294, 493, 524, 1130, 1287, 1622
Hin1I	GRCGYC	1 cut(s)	1376
Hin6I	GCGC	6 cut(s)	292, 491, 522, 1128, 1285, 1620
HinP1I	GCGC	6 cut(s)	292, 491, 522, 1128, 1285, 1620
HincII	GTYRAC	2 cut(s)	349, 1600
HindII	GTYRAC	2 cut(s)	349, 1600
HindIII	AAGCTT	1 cut(s)	1201
HinfI	GANTC	8 cut(s)	253, 559, 648, 728, 938, 1109, 1116, 1275
HpaI	GTTAAC	1 cut(s)	1600
HpaII	CCGG	4 cut(s)	71, 852, 1069, 1691
HphI	GGTGA	6 cut(s)	412, 604, 623, 1285, 1495, 1604
Hpy166II	GTNNAC	3 cut(s)	349, 1600, 1688
Hpy188I	TCNGA	5 cut(s)	26, 733, 1065, 1648, 1728
Hpy188III	TCNNGA	9 cut(s)	71, 530, 697, 852, 1083, 1106, 1113, 1211, 1516
Hpy8I	GTNNAC	3 cut(s)	349, 1600, 1688
Hpy99I	CGWCG	1 cut(s)	353
HpyAV	CCTTC	8 cut(s)	238, 350, 884, 903, 1183, 1385, 1607, 1622
HpyCH4III	ACNGT	5 cut(s)	154, 335, 373, 466, 1425
HpyCH4IV	ACGT	3 cut(s)	351, 755, 1215
HpyCH4V	TGCA	9 cut(s)	114, 221, 629, 779, 902, 1219, 1331, 1638, 1712
HpyF10VI	GCNNNNNNNGC	2 cut(s)	294, 1304
HpyF3I	CTNAG	9 cut(s)	392, 513, 548, 602, 633, 652, 1524, 1603, 1645
HpySE526I	ACGT	3 cut(s)	351, 755, 1215
Hsp92I	GRCGYC	1 cut(s)	1376
HspAI	GCGC	6 cut(s)	292, 491, 522, 1128, 1285, 1620
KflI	GGGWCCC	1 cut(s)	1135
Kpn2I	TCCGGA	2 cut(s)	70, 851
Ksp22I	TGATCA	2 cut(s)	309, 402
KspAI	GTTAAC	1 cut(s)	1600
Kzo9I	GATC	9 cut(s)	145, 309, 402, 619, 742, 829, 1143, 1716, 1728
LguI	GCTCTTC	1 cut(s)	230
LmnI	GCTCC	2 cut(s)	1389, 1436
Lsp1109I	GCAGC	3 cut(s)	400, 641, 778
LweI	GCATC	8 cut(s)	144, 208, 940, 1088, 1188, 1307, 1318, 1699
MabI	ACCWGGT	1 cut(s)	1572
MaeI	CTAG	7 cut(s)	168, 183, 479, 798, 1226, 1380, 1625
MaeII	ACGT	3 cut(s)	351, 755, 1215
MaeIII	GTNAC	6 cut(s)	257, 385, 670, 982, 1291, 1568
MalI	GATC	9 cut(s)	147, 311, 404, 621, 744, 831, 1145, 1718, 1730
MbiI	CCGCTC	1 cut(s)	381
MboI	GATC	9 cut(s)	145, 309, 402, 619, 742, 829, 1143, 1716, 1728
MfeI	CAATTG	2 cut(s)	1332, 1415
MflI	RGATCY	2 cut(s)	619, 1716
MhlI	GDGCHC	2 cut(s)	573, 1666
MlsI	TGGCCA	1 cut(s)	1196
MluCI	AATT	4 cut(s)	1332, 1415, 1584, 1735
MluNI	TGGCCA	1 cut(s)	1196
MlyI	GAGTC	3 cut(s)	247, 568, 657
Mox20I	TGGCCA	1 cut(s)	1196
MroI	TCCGGA	2 cut(s)	70, 851
MroXI	GAANNNNTTC	1 cut(s)	1653
MscI	TGGCCA	1 cut(s)	1196
MseI	TTAA	6 cut(s)	204, 342, 624, 1428, 1587, 1599
MslI	CAYNNNNRTG	4 cut(s)	245, 451, 534, 1129
Msp20I	TGGCCA	1 cut(s)	1196
MspI	CCGG	4 cut(s)	71, 852, 1069, 1691
MspR9I	CCNGG	3 cut(s)	564, 1574, 1692
MunI	CAATTG	2 cut(s)	1332, 1415
Mva1269I	GAATGC	1 cut(s)	270
MvaI	CCWGG	2 cut(s)	564, 1574
MvnI	CGCG	2 cut(s)	292, 294
MwoI	GCNNNNNNNGC	2 cut(s)	294, 1304
NciI	CCSGG	1 cut(s)	1692
NdeII	GATC	9 cut(s)	145, 309, 402, 619, 742, 829, 1143, 1716, 1728
NlaIV	GGNNCC	5 cut(s)	571, 1136, 1137, 1368, 1385
NmuCI	GTSAC	4 cut(s)	385, 982, 1291, 1568
NsbI	TGCGCA	2 cut(s)	492, 1129
NspI	RCATGY	1 cut(s)	1128
PaeI	GCATGC	1 cut(s)	1128
PagI	TCATGA	1 cut(s)	529
PaqCI	CACCTGC	1 cut(s)	388
PciSI	GCTCTTC	1 cut(s)	230
PctI	GAATGC	1 cut(s)	270
PdmI	GAANNNNTTC	1 cut(s)	1653
PfeI	GAWTC	5 cut(s)	728, 938, 1109, 1116, 1275
PflFI	GACNNNGTC	1 cut(s)	1574
PfoI	TCCNGGA	1 cut(s)	562
PkrI	GCNGC	5 cut(s)	296, 383, 415, 631, 768
Ple19I	CGATCG	1 cut(s)	148
PleI	GAGTC	3 cut(s)	247, 567, 656
PpsI	GAGTC	3 cut(s)	247, 567, 656
PpuMI	RGGWCCY	3 cut(s)	1135, 1366, 1576
PsiI	TTATAA	1 cut(s)	914
Psp5II	RGGWCCY	3 cut(s)	1135, 1366, 1576
Psp6I	CCWGG	2 cut(s)	562, 1572
PspGI	CCWGG	2 cut(s)	562, 1572
PspN4I	GGNNCC	5 cut(s)	571, 1136, 1137, 1368, 1385
PspOMI	GGGCCC	1 cut(s)	569
PspPI	GGNCC	7 cut(s)	76, 569, 570, 702, 1135, 1366, 1576
PspPPI	RGGWCCY	3 cut(s)	1135, 1366, 1576
PsuI	RGATCY	2 cut(s)	619, 1716
PsyI	GACNNNGTC	1 cut(s)	1574
PvuI	CGATCG	1 cut(s)	148
RsaI	GTAC	4 cut(s)	187, 1433, 1496, 1723
RsaNI	GTAC	4 cut(s)	186, 1432, 1495, 1722
RseI	CAYNNNNRTG	4 cut(s)	245, 451, 534, 1129
SalI	GTCGAC	1 cut(s)	347
SapI	GCTCTTC	1 cut(s)	230
SaqAI	TTAA	6 cut(s)	204, 342, 624, 1428, 1587, 1599
SatI	GCNGC	5 cut(s)	295, 382, 414, 630, 767
Sau3AI	GATC	9 cut(s)	145, 309, 402, 619, 742, 829, 1143, 1716, 1728
Sau96I	GGNCC	7 cut(s)	76, 569, 570, 702, 1135, 1366, 1576
SchI	GAGTC	3 cut(s)	247, 568, 657
ScrFI	CCNGG	3 cut(s)	564, 1574, 1692
SduI	GDGCHC	2 cut(s)	573, 1666
SexAI	ACCWGGT	1 cut(s)	1572
SfaNI	GCATC	8 cut(s)	144, 208, 940, 1088, 1188, 1307, 1318, 1699
SfcI	CTRYAG	1 cut(s)	1684
SinI	GGWCC	5 cut(s)	76, 702, 1135, 1366, 1576
SmiMI	CAYNNNNRTG	4 cut(s)	245, 451, 534, 1129
SmlI	CTYRAG	2 cut(s)	1516, 1555
SmoI	CTYRAG	2 cut(s)	1516, 1555
SpeI	ACTAGT	1 cut(s)	167
SphI	GCATGC	1 cut(s)	1128
Sse9I	AATT	4 cut(s)	1332, 1415, 1584, 1735
SsiI	CCGC	4 cut(s)	290, 294, 381, 1296
SspMI	CTAG	7 cut(s)	168, 183, 479, 798, 1226, 1380, 1625
StyD4I	CCNGG	3 cut(s)	562, 1572, 1690
StyI	CCWWGG	4 cut(s)	1139, 1312, 1379, 1579
TaaI	ACNGT	5 cut(s)	154, 335, 373, 466, 1425
TaiI	ACGT	3 cut(s)	354, 758, 1218
TaqI	TCGA	5 cut(s)	148, 348, 820, 883, 1341
TasI	AATT	4 cut(s)	1332, 1415, 1584, 1735
TatI	WGTACW	2 cut(s)	1494, 1721
TauI	GCSGC	2 cut(s)	297, 384
TfiI	GAWTC	5 cut(s)	728, 938, 1109, 1116, 1275
Tru1I	TTAA	6 cut(s)	204, 342, 624, 1428, 1587, 1599
Tru9I	TTAA	6 cut(s)	204, 342, 624, 1428, 1587, 1599
TscAI	CASTG	3 cut(s)	412, 909, 1428
TseFI	GTSAC	4 cut(s)	385, 982, 1291, 1568
TseI	GCWGC	3 cut(s)	413, 629, 766
Tsp45I	GTSAC	4 cut(s)	385, 982, 1291, 1568
TspDTI	ATGAA	8 cut(s)	81, 257, 518, 1151, 1195, 1404, 1502, 1646
TspGWI	ACGGA	3 cut(s)	203, 1180, 1449
TspRI	CASTG	3 cut(s)	412, 909, 1428
Tth111I	GACNNNGTC	1 cut(s)	1574
VpaK11BI	GGWCC	5 cut(s)	76, 702, 1135, 1366, 1576
XceI	RCATGY	1 cut(s)	1128
XcmI	CCANNNNNNNNNTGG	1 cut(s)	424
XmaJI	CCTAGG	1 cut(s)	1379
XmiI	GTMKAC	2 cut(s)	348, 1687
XmnI	GAANNNNTTC	1 cut(s)	1653
XspI	CTAG	7 cut(s)	168, 183, 479, 798, 1226, 1380, 1625

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.