Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0002464

Physical Location & Seq

Genomic Coordinates Reverse (-)

26200809 .. 26205055

Gene Structure 4247 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G021610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGGGTATGTTGGGGCTTGTTATCCGAGTAAACTGTCTATTCTTGTTATCGTTCTTGGTGTGTTCTACCCCTCCGGAGGACCCCATCAAGTGTTCATCGTCAAAAAACACAAACTGCACCATCACAAATTCCTACGGCATCTTCCCCGATCGAACTGTCTGTAAAGCGACTAGTGTATCATACCCTAGTACGGAGGAAGAACTCGTTAAGGTCGTGGCTGATGCAACCAAGAACAAGAAGAGCATGAAGGTGGCGACTCGTTACTCCCACAGCATTCCCAAGCTGGTTTGCCCGCGCGGCGAAGACGGGCTGATCATAAGCACCAACAACCTCAACCGTGTGGTGAAGGTCGACGTTGAAGGGATGAAGATGACGGTGGAGAGCGGCATGACGCTTAGGCAGGTGATCAGTGAGGCTGCGAAGGTTGACTTGGCGTTGCCTTACGCGCCATATTGGTGGGGGCTAACTGTCGGTGGGTTGCTAGGGACTGGTGCGCATGGAAGCACATTATGGGGTAAGGGAAGCTCTGTTCATGATTATGTGGTGGGACTTAGGATTGTGAGTTCAGGAGGGCCTGAAGTTGGTTATGTCAAGGTGAGAAGTCTCGGTCAAGGTGATAAAGATCTTAATGCAGCTAAGGTTTCACTAGGAGTCTTAGGAGTAATATCACAGGTTACTCTAAACCTACAACCCATGTTCAAGAGGTCCATCACATATTTGAGCGAGACCGATTCTGACTTGGGAGATCAAGTGCTTAATTTCGGCAAGCAGCATGAGTTTGCGGACATACTATGGTATCCTAGCCAGCACAAGGCAGTTTATCGAGTAGATGATCGTATCTCCTCAAACACATCCGGAAATGGTTTATATGATTTCCTTCCTTTTCGAGCAACGCCTTCAGTTGCACTGGCAGTTATAAGAACGGCAGGTATAATCTTTACTGGATATCCTGTGATTGGATATCAGAACCGGCTTCAAGCATCTGGAACTTGCCTTGATAGTCATCAAGATTCAAGAATCACGGCATGCGCATGGGACCCAAGGATCAAGGGCGAGTTTTTTCATCAAACAACCTTCAGCATCAGCTTGTCCGTGGCCAAAAGCTTCATTCAAGACGTGCAGAAGCTAGTTGAGATTGAACCCAAATCCCTCTGTGGAGTAGAAATCTACAATGGAATCCTAATGCGCTATGTCACCGCATCAACTGCTTACCTTGGCAAACAAGTAGATGCAATTGACTTCGACTTCACTTATTACCGAAGCAAGGACCCCATGACGCCTAGGCTCCATGAAGGCATACTTGAAGAAATAGAGCAGTTGGCACTGTTTAAGTACGGAGCATTGCCACATTGGGGAAAGAATAGGAACATAGCCTTTGATGGGGTGATGAAGAAGTACAAACATGCTAAGGAGTTCTTGAGGGTTAAGGAAGTGTATGACCCAATGGGGCTATTCTCAAGTGAATGGAGTGACCAGGTCCTTGGAATTAAGGGTGAGGTTACCTTAGTCAAGGAAGGGTGCGCCCTAGAAGGGTTGTGCATTTGCTCACAAGACATTCATTGTGCCCCAAGCAAGGGCTACTTCTGTAGACCGGGGAAAGTATTTAGGGATGCAAGGATCTGTACTCCGATCCATAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005618 GO:0005623 GO:0005975 GO:0005996 GO:0006082 GO:0006732 GO:0006766 GO:0006767 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009110 GO:0009987 GO:0016051 GO:0016053 GO:0016491 GO:0016614 GO:0016899 GO:0019752 GO:0019852 GO:0019853 GO:0030312 GO:0036094 GO:0042364 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044464 GO:0046364 GO:0046394 GO:0048037 GO:0050105 GO:0050660 GO:0050662 GO:0051186 GO:0051188 GO:0055114 GO:0071704 GO:0071944 GO:0097159 GO:1901265 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ALO FAD_binding_4

Protein Analysis

546

Amino Acids

60.23

Weight (kDa)

8.47

Isoelectric Point (pI)

29.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	59 - 191	1.7e-17	FAD binding domain
ALO	PF04030	225 - 492	2.6e-13	D-arabinono-1,4-lactone oxidase
GULLO2-like_3rd	PF22906	504 - 542	4.5e-24	L-gulonolactone oxidase 2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002464)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46750 AT2G46760 AT5G56470
fragaria_vesca	FvH4_7g17510 FvH4_7g17511
malus_domestica	MD01G1087800.v1.1 MD07G1157900.v1.1
prunus_persica	Prupe.2G196400_v2.0.a1
pyrus_communis	pycom01g11170 pycom07g15450
rosa_chinensis	RchiOBHm_Chr1g0360921 RchiOBHm_Chr1g0360951 RchiOBHm_Chr3g0481291 RchiOBHm_Chr5g0029651
rosa_laevigata	RLG00000019622 RLG00000027767 RLG00000027769
rosa_multiflora	Rmu_sc0000206.1_g000019 Rmu_sc0000677.1_g000024 Rmu_sc0002207.1_g000003 Rmu_sc0008012.1_g000002
rosa_roxburghii	Rroxscaffold_3G00228090 Rroxscaffold_4G00295680 Rroxscaffold_4G00295700 Rroxscaffold_5G00385060
rosa_rugosa	Rorug01G0283500 Rorug01G0283800 Rorug03G0191000
rosa_samantha	Rh1AG295000 Rh1BG259800 Rh1BG259900 Rh1CG277200 Rh1DG289900 Rh2BG393900 Rh3AG241900 Rh3BG277100 Rh3DG268900
rosa_wichuraiana	Rw1G026070 Rw1G026100 Rw1G026110 Rw3G021610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	917
AarI	CACCTGC	1 cut(s)	391
Acc16I	TGCGCA	2 cut(s)	495, 1030
Acc36I	ACCTGC	2 cut(s)	391, 917
AccBSI	CCGCTC	1 cut(s)	384
AccI	GTMKAC	2 cut(s)	351, 1588
AccII	CGCG	3 cut(s)	295, 297, 446
AccIII	TCCGGA	2 cut(s)	73, 854
AciI	CCGC	5 cut(s)	293, 297, 384, 782, 1197
AclWI	GGATC	3 cut(s)	1052, 1624, 1625
AcoI	YGGCCR	1 cut(s)	1095
AcsI	RAATTY	1 cut(s)	127
AcuI	CTGAAG	3 cut(s)	597, 882, 1060
AcyI	GRCGYC	1 cut(s)	1277
AfaI	GTAC	4 cut(s)	190, 1334, 1397, 1624
AgsI	TTSAA	7 cut(s)	359, 700, 977, 1014, 1112, 1139, 1304
AhlI	ACTAGT	1 cut(s)	170
AjiI	CACGTC	1 cut(s)	1117
AjnI	CCWGG	1 cut(s)	1473
AjuI	GAANNNNNNNTTGG	2 cut(s)	413, 445
AloI	GAACNNNNNNTCC	4 cut(s)	513, 545, 547, 579
AluBI	AGCT	6 cut(s)	283, 525, 635, 1086, 1104, 1126
AluI	AGCT	6 cut(s)	283, 525, 635, 1086, 1104, 1126
Alw26I	GTCTC	2 cut(s)	608, 719
AlwI	GGATC	3 cut(s)	1052, 1624, 1625
Aor13HI	TCCGGA	2 cut(s)	73, 854
AoxI	GGCC	2 cut(s)	572, 1095
ApeKI	GCWGC	3 cut(s)	416, 632, 769
ApoI	RAATTY	1 cut(s)	127
AspA2I	CCTAGG	1 cut(s)	1280
AspLEI	GCGC	6 cut(s)	297, 448, 496, 1031, 1188, 1523
AspS9I	GGNCC	6 cut(s)	79, 572, 705, 1036, 1267, 1477
AsuC2I	CCSGG	1 cut(s)	1593
AsuHPI	GGTGA	7 cut(s)	355, 415, 607, 626, 1186, 1396, 1505
AvaII	GGWCC	5 cut(s)	79, 705, 1036, 1267, 1477
AvrII	CCTAGG	1 cut(s)	1280
BaeGI	GKGCMC	1 cut(s)	1567
BaeI	ACNNNNGTAYC	4 cut(s)	159, 192, 779, 812
BalI	TGGCCA	1 cut(s)	1097
BbsI	GAAGAC	1 cut(s)	309
BbvI	GCAGC	3 cut(s)	403, 644, 781
BccI	CCATC	4 cut(s)	92, 128, 716, 1373
BceAI	ACGGC	3 cut(s)	151, 939, 1038
BciT130I	CCWGG	1 cut(s)	1475
BciVI	GTATCC	1 cut(s)	807
BclI	TGATCA	2 cut(s)	312, 405
BcnI	CCSGG	1 cut(s)	1593
BcoDI	GTCTC	2 cut(s)	608, 719
BcuI	ACTAGT	1 cut(s)	170
BfaI	CTAG	8 cut(s)	171, 186, 482, 647, 801, 1127, 1281, 1526
BfmI	CTRYAG	1 cut(s)	1585
BfuAI	ACCTGC	2 cut(s)	391, 917
BfuI	GTATCC	1 cut(s)	807
BglI	GCCNNNNNGGC	1 cut(s)	297
BglII	AGATCT	1 cut(s)	622
BisI	GCNGC	5 cut(s)	298, 385, 417, 633, 770
BlnI	CCTAGG	1 cut(s)	1280
BlsI	GCNGC	5 cut(s)	299, 386, 418, 634, 771
Bme1390I	CCNGG	2 cut(s)	1475, 1593
Bme18I	GGWCC	5 cut(s)	79, 705, 1036, 1267, 1477
BmgBI	CACGTC	1 cut(s)	1117
BmgT120I	GGNCC	6 cut(s)	79, 572, 705, 1036, 1267, 1477
BmiI	GGNNCC	5 cut(s)	81, 1037, 1038, 1269, 1286
BmrFI	CCNGG	2 cut(s)	1475, 1593
BmsI	GCATC	7 cut(s)	147, 211, 989, 1089, 1208, 1219, 1600
BpiI	GAAGAC	1 cut(s)	309
Bpu10I	CCTNAGC	3 cut(s)	395, 636, 1407
BpuEI	CTTGAG	2 cut(s)	1438, 1441
BpuMI	CCSGG	1 cut(s)	1593
BsaBI	GATNNNNATC	2 cut(s)	621, 1002
BsaHI	GRCGYC	1 cut(s)	1277
BsaI	GGTCTC	1 cut(s)	719
BsaJI	CCNNGG	6 cut(s)	1040, 1092, 1213, 1280, 1480, 1592
BsaWI	WCCGGW	2 cut(s)	73, 854
BsaXI	ACNNNNNCTCC	2 cut(s)	735, 765
Bse118I	RCCGGY	1 cut(s)	969
Bse1I	ACTGG	3 cut(s)	493, 912, 946
Bse3DI	GCAATG	1 cut(s)	1340
Bse8I	GATNNNNATC	2 cut(s)	621, 1002
BseAI	TCCGGA	2 cut(s)	73, 854
BseBI	CCWGG	1 cut(s)	1475
BseDI	CCNNGG	6 cut(s)	1040, 1092, 1213, 1280, 1480, 1592
BseGI	GGATG	3 cut(s)	369, 851, 1615
BseJI	GATNNNNATC	2 cut(s)	621, 1002
BseMI	GCAATG	1 cut(s)	1340
BseNI	ACTGG	3 cut(s)	493, 912, 946
BseRI	GAGGAG	1 cut(s)	832
BseSI	GKGCMC	1 cut(s)	1567
BseXI	GCAGC	3 cut(s)	403, 644, 781
BsgI	GTGCAG	2 cut(s)	100, 1139
Bsh1236I	CGCG	3 cut(s)	295, 297, 446
Bsh1285I	CGRYCG	1 cut(s)	151
BshFI	GGCC	2 cut(s)	574, 1097
BsiEI	CGRYCG	1 cut(s)	151
BsiSI	CCGG	4 cut(s)	74, 855, 970, 1592
BslFI	GGGAC	3 cut(s)	499, 561, 1049
BsmAI	GTCTC	2 cut(s)	608, 719
BsmFI	GGGAC	3 cut(s)	499, 561, 1049
BsmI	GAATGC	1 cut(s)	273
BsnI	GGCC	2 cut(s)	574, 1097
Bso31I	GGTCTC	1 cut(s)	719
Bsp1286I	GDGCHC	1 cut(s)	1567
Bsp13I	TCCGGA	2 cut(s)	73, 854
Bsp143I	GATC	9 cut(s)	148, 312, 405, 622, 745, 832, 1044, 1617, 1629
BspACI	CCGC	5 cut(s)	293, 297, 384, 782, 1197
BspANI	GGCC	2 cut(s)	574, 1097
BspEI	TCCGGA	2 cut(s)	73, 854
BspFNI	CGCG	3 cut(s)	295, 297, 446
BspHI	TCATGA	1 cut(s)	532
BspLI	GGNNCC	5 cut(s)	81, 1037, 1038, 1269, 1286
BspMI	ACCTGC	2 cut(s)	391, 917
BspPI	GGATC	3 cut(s)	1052, 1624, 1625
BspQI	GCTCTTC	1 cut(s)	233
BspTNI	GGTCTC	1 cut(s)	719
BsrBI	CCGCTC	1 cut(s)	384
BsrDI	GCAATG	1 cut(s)	1340
BsrFI	RCCGGY	1 cut(s)	969
BsrI	ACTGG	3 cut(s)	493, 912, 946
BssAI	RCCGGY	1 cut(s)	969
BssECI	CCNNGG	6 cut(s)	1040, 1092, 1213, 1280, 1480, 1592
BssMI	GATC	9 cut(s)	148, 312, 405, 622, 745, 832, 1044, 1617, 1629
BssNI	GRCGYC	1 cut(s)	1277
BssT1I	CCWWGG	4 cut(s)	1040, 1213, 1280, 1480
Bst2UI	CCWGG	1 cut(s)	1475
Bst4CI	ACNGT	6 cut(s)	35, 157, 338, 376, 469, 1326
Bst6I	CTCTTC	1 cut(s)	233
BstACI	GRCGYC	1 cut(s)	1277
BstAPI	GCANNNNNTGC	1 cut(s)	1205
BstC8I	GCNNGC	4 cut(s)	293, 767, 806, 1027
BstDEI	CTNAG	6 cut(s)	395, 551, 636, 655, 1407, 1504
BstDSI	CCRYGG	1 cut(s)	1092
BstEII	GGTNACC	1 cut(s)	1498
BstF5I	GGATG	3 cut(s)	369, 851, 1615
BstFNI	CGCG	3 cut(s)	295, 297, 446
BstHHI	GCGC	6 cut(s)	297, 448, 496, 1031, 1188, 1523
BstKTI	GATC	9 cut(s)	151, 315, 408, 625, 748, 835, 1047, 1620, 1632
BstMAI	GTCTC	2 cut(s)	608, 719
BstMBI	GATC	9 cut(s)	148, 312, 405, 622, 745, 832, 1044, 1617, 1629
BstMCI	CGRYCG	1 cut(s)	151
BstMWI	GCNNNNNNNGC	3 cut(s)	297, 445, 1205
BstNI	CCWGG	1 cut(s)	1475
BstNSI	RCATGY	2 cut(s)	1029, 1406
BstPI	GGTNACC	1 cut(s)	1498
BstSCI	CCNGG	2 cut(s)	1473, 1591
BstSFI	CTRYAG	1 cut(s)	1585
BstSLI	GKGCMC	1 cut(s)	1567
BstUI	CGCG	3 cut(s)	295, 297, 446
BstV1I	GCAGC	3 cut(s)	403, 644, 781
BstV2I	GAAGAC	1 cut(s)	309
BstX2I	RGATCY	2 cut(s)	622, 1617
BstXI	CCANNNNNNTGG	2 cut(s)	456, 1481
BstYI	RGATCY	2 cut(s)	622, 1617
BsuI	GTATCC	1 cut(s)	807
BsuRI	GGCC	2 cut(s)	574, 1097
BtgI	CCRYGG	1 cut(s)	1092
BtrI	CACGTC	1 cut(s)	1117
BtsCI	GGATG	3 cut(s)	369, 851, 1615
BtsIMutI	CAGTG	3 cut(s)	415, 905, 1322
BveI	ACCTGC	2 cut(s)	391, 917
Cac8I	GCNNGC	4 cut(s)	293, 767, 806, 1027
CciI	TCATGA	1 cut(s)	532
CfoI	GCGC	6 cut(s)	297, 448, 496, 1031, 1188, 1523
Cfr10I	RCCGGY	1 cut(s)	969
Cfr13I	GGNCC	6 cut(s)	79, 572, 705, 1036, 1267, 1477
CseI	GACGC	2 cut(s)	400, 1285
CsiI	ACCWGGT	1 cut(s)	1473
Csp6I	GTAC	4 cut(s)	189, 1333, 1396, 1623
CviQI	GTAC	4 cut(s)	189, 1333, 1396, 1623
DdeI	CTNAG	6 cut(s)	395, 551, 636, 655, 1407, 1504
DpnI	GATC	9 cut(s)	150, 314, 407, 624, 747, 834, 1046, 1619, 1631
DpnII	GATC	9 cut(s)	148, 312, 405, 622, 745, 832, 1044, 1617, 1629
EaeI	YGGCCR	1 cut(s)	1095
Eam1104I	CTCTTC	1 cut(s)	233
EarI	CTCTTC	1 cut(s)	233
Eco130I	CCWWGG	4 cut(s)	1040, 1213, 1280, 1480
Eco31I	GGTCTC	1 cut(s)	719
Eco32I	GATATC	2 cut(s)	947, 962
Eco47I	GGWCC	5 cut(s)	79, 705, 1036, 1267, 1477
Eco57I	CTGAAG	3 cut(s)	597, 882, 1060
Eco91I	GGTNACC	1 cut(s)	1498
EcoO109I	RGGNCCY	5 cut(s)	79, 572, 1036, 1267, 1477
EcoO65I	GGTNACC	1 cut(s)	1498
EcoRII	CCWGG	1 cut(s)	1473
EcoRV	GATATC	2 cut(s)	947, 962
EcoT14I	CCWWGG	4 cut(s)	1040, 1213, 1280, 1480
ErhI	CCWWGG	4 cut(s)	1040, 1213, 1280, 1480
FalI	AAGNNNNNCTT	8 cut(s)	413, 445, 1284, 1316, 1400, 1432, 1565, 1597
FaqI	GGGAC	3 cut(s)	499, 561, 1049
FauI	CCCGC	1 cut(s)	300
FbaI	TGATCA	2 cut(s)	312, 405
FblI	GTMKAC	2 cut(s)	351, 1588
Fnu4HI	GCNGC	5 cut(s)	298, 385, 417, 633, 770
FokI	GGATG	3 cut(s)	376, 838, 1622
Fsp4HI	GCNGC	5 cut(s)	298, 385, 417, 633, 770
FspAI	RTGCGCAY	2 cut(s)	495, 1030
FspBI	CTAG	8 cut(s)	171, 186, 482, 647, 801, 1127, 1281, 1526
FspI	TGCGCA	2 cut(s)	495, 1030
GlaI	GCGC	6 cut(s)	296, 447, 495, 1030, 1187, 1522
GluI	GCNGC	5 cut(s)	298, 385, 417, 633, 770
HaeIII	GGCC	2 cut(s)	574, 1097
HapII	CCGG	4 cut(s)	74, 855, 970, 1592
HgaI	GACGC	2 cut(s)	400, 1285
HhaI	GCGC	6 cut(s)	297, 448, 496, 1031, 1188, 1523
Hin1I	GRCGYC	1 cut(s)	1277
Hin6I	GCGC	6 cut(s)	295, 446, 494, 1029, 1186, 1521
HinP1I	GCGC	6 cut(s)	295, 446, 494, 1029, 1186, 1521
HincII	GTYRAC	2 cut(s)	352, 427
HindII	GTYRAC	2 cut(s)	352, 427
HindIII	AAGCTT	1 cut(s)	1102
HinfI	GANTC	6 cut(s)	256, 651, 731, 1010, 1017, 1176
HpaII	CCGG	4 cut(s)	74, 855, 970, 1592
HphI	GGTGA	7 cut(s)	355, 415, 607, 626, 1186, 1396, 1505
Hpy166II	GTNNAC	4 cut(s)	31, 352, 427, 1589
Hpy188I	TCNGA	4 cut(s)	26, 736, 966, 1629
Hpy8I	GTNNAC	4 cut(s)	31, 352, 427, 1589
Hpy99I	CGWCG	1 cut(s)	356
HpyCH4III	ACNGT	6 cut(s)	35, 157, 338, 376, 469, 1326
HpyCH4IV	ACGT	2 cut(s)	354, 1116
HpyCH4V	TGCA	8 cut(s)	117, 224, 632, 905, 1120, 1232, 1539, 1613
HpyF10VI	GCNNNNNNNGC	3 cut(s)	297, 445, 1205
HpyF3I	CTNAG	6 cut(s)	395, 551, 636, 655, 1407, 1504
HpySE526I	ACGT	2 cut(s)	354, 1116
Hsp92I	GRCGYC	1 cut(s)	1277
HspAI	GCGC	6 cut(s)	295, 446, 494, 1029, 1186, 1521
KflI	GGGWCCC	1 cut(s)	1036
Kpn2I	TCCGGA	2 cut(s)	73, 854
Ksp22I	TGATCA	2 cut(s)	312, 405
Kzo9I	GATC	9 cut(s)	148, 312, 405, 622, 745, 832, 1044, 1617, 1629
LguI	GCTCTTC	1 cut(s)	233
LmnI	GCTCC	2 cut(s)	1290, 1337
Lsp1109I	GCAGC	3 cut(s)	403, 644, 781
LweI	GCATC	7 cut(s)	147, 211, 989, 1089, 1208, 1219, 1600
MabI	ACCWGGT	1 cut(s)	1473
MaeI	CTAG	8 cut(s)	171, 186, 482, 647, 801, 1127, 1281, 1526
MaeII	ACGT	2 cut(s)	354, 1116
MaeIII	GTNAC	5 cut(s)	260, 673, 1192, 1469, 1498
MalI	GATC	9 cut(s)	150, 314, 407, 624, 747, 834, 1046, 1619, 1631
MbiI	CCGCTC	1 cut(s)	384
MboI	GATC	9 cut(s)	148, 312, 405, 622, 745, 832, 1044, 1617, 1629
MboII	GAAGA	7 cut(s)	133, 209, 250, 314, 379, 1316, 1402
MfeI	CAATTG	1 cut(s)	1233
MflI	RGATCY	2 cut(s)	622, 1617
MhlI	GDGCHC	1 cut(s)	1567
MlsI	TGGCCA	1 cut(s)	1097
MluCI	AATT	5 cut(s)	127, 757, 1233, 1485, 1636
MluNI	TGGCCA	1 cut(s)	1097
MlyI	GAGTC	2 cut(s)	250, 660
Mox20I	TGGCCA	1 cut(s)	1097
MroI	TCCGGA	2 cut(s)	73, 854
MscI	TGGCCA	1 cut(s)	1097
MseI	TTAA	6 cut(s)	207, 627, 756, 1329, 1425, 1488
MslI	CAYNNNNRTG	4 cut(s)	248, 454, 537, 1030
Msp20I	TGGCCA	1 cut(s)	1097
MspI	CCGG	4 cut(s)	74, 855, 970, 1592
MspR9I	CCNGG	2 cut(s)	1475, 1593
MunI	CAATTG	1 cut(s)	1233
Mva1269I	GAATGC	1 cut(s)	273
MvaI	CCWGG	1 cut(s)	1475
MvnI	CGCG	3 cut(s)	295, 297, 446
MwoI	GCNNNNNNNGC	3 cut(s)	297, 445, 1205
NciI	CCSGG	1 cut(s)	1593
NdeII	GATC	9 cut(s)	148, 312, 405, 622, 745, 832, 1044, 1617, 1629
NlaIV	GGNNCC	5 cut(s)	81, 1037, 1038, 1269, 1286
NmuCI	GTSAC	2 cut(s)	1192, 1469
NsbI	TGCGCA	2 cut(s)	495, 1030
NspI	RCATGY	2 cut(s)	1029, 1406
PaeI	GCATGC	1 cut(s)	1029
PagI	TCATGA	1 cut(s)	532
PaqCI	CACCTGC	1 cut(s)	391
PciSI	GCTCTTC	1 cut(s)	233
PcsI	WCGNNNNNNNCGW	1 cut(s)	210
PctI	GAATGC	1 cut(s)	273
PfeI	GAWTC	4 cut(s)	731, 1010, 1017, 1176
PflFI	GACNNNGTC	1 cut(s)	1475
PkrI	GCNGC	5 cut(s)	299, 386, 418, 634, 771
Ple19I	CGATCG	1 cut(s)	151
PleI	GAGTC	2 cut(s)	250, 659
PpsI	GAGTC	2 cut(s)	250, 659
PpuMI	RGGWCCY	4 cut(s)	79, 1036, 1267, 1477
PsiI	TTATAA	1 cut(s)	917
Psp5II	RGGWCCY	4 cut(s)	79, 1036, 1267, 1477
Psp6I	CCWGG	1 cut(s)	1473
PspEI	GGTNACC	1 cut(s)	1498
PspGI	CCWGG	1 cut(s)	1473
PspN4I	GGNNCC	5 cut(s)	81, 1037, 1038, 1269, 1286
PspPI	GGNCC	6 cut(s)	79, 572, 705, 1036, 1267, 1477
PspPPI	RGGWCCY	4 cut(s)	79, 1036, 1267, 1477
PsuI	RGATCY	2 cut(s)	622, 1617
PsyI	GACNNNGTC	1 cut(s)	1475
PvuI	CGATCG	1 cut(s)	151
RsaI	GTAC	4 cut(s)	190, 1334, 1397, 1624
RsaNI	GTAC	4 cut(s)	189, 1333, 1396, 1623
RseI	CAYNNNNRTG	4 cut(s)	248, 454, 537, 1030
SalI	GTCGAC	1 cut(s)	350
SapI	GCTCTTC	1 cut(s)	233
SaqAI	TTAA	6 cut(s)	207, 627, 756, 1329, 1425, 1488
SatI	GCNGC	5 cut(s)	298, 385, 417, 633, 770
Sau3AI	GATC	9 cut(s)	148, 312, 405, 622, 745, 832, 1044, 1617, 1629
Sau96I	GGNCC	6 cut(s)	79, 572, 705, 1036, 1267, 1477
SchI	GAGTC	2 cut(s)	250, 660
ScrFI	CCNGG	2 cut(s)	1475, 1593
SduI	GDGCHC	1 cut(s)	1567
SexAI	ACCWGGT	1 cut(s)	1473
SfaNI	GCATC	7 cut(s)	147, 211, 989, 1089, 1208, 1219, 1600
SfcI	CTRYAG	1 cut(s)	1585
SinI	GGWCC	5 cut(s)	79, 705, 1036, 1267, 1477
SmiMI	CAYNNNNRTG	4 cut(s)	248, 454, 537, 1030
SmlI	CTYRAG	2 cut(s)	1417, 1456
SmoI	CTYRAG	2 cut(s)	1417, 1456
SpeI	ACTAGT	1 cut(s)	170
SphI	GCATGC	1 cut(s)	1029
Sse9I	AATT	5 cut(s)	127, 757, 1233, 1485, 1636
SsiI	CCGC	5 cut(s)	293, 297, 384, 782, 1197
SspMI	CTAG	8 cut(s)	171, 186, 482, 647, 801, 1127, 1281, 1526
StyD4I	CCNGG	2 cut(s)	1473, 1591
StyI	CCWWGG	4 cut(s)	1040, 1213, 1280, 1480
TaaI	ACNGT	6 cut(s)	35, 157, 338, 376, 469, 1326
TaiI	ACGT	2 cut(s)	357, 1119
TaqI	TCGA	5 cut(s)	151, 351, 823, 886, 1242
TaqII	GACCGA	2 cut(s)	596, 743
TasI	AATT	5 cut(s)	127, 757, 1233, 1485, 1636
TatI	WGTACW	2 cut(s)	1395, 1622
TauI	GCSGC	2 cut(s)	300, 387
TfiI	GAWTC	4 cut(s)	731, 1010, 1017, 1176
Tru1I	TTAA	6 cut(s)	207, 627, 756, 1329, 1425, 1488
Tru9I	TTAA	6 cut(s)	207, 627, 756, 1329, 1425, 1488
TscAI	CASTG	3 cut(s)	415, 912, 1329
TseFI	GTSAC	2 cut(s)	1192, 1469
TseI	GCWGC	3 cut(s)	416, 632, 769
Tsp45I	GTSAC	2 cut(s)	1192, 1469
TspDTI	ATGAA	9 cut(s)	84, 260, 380, 521, 1052, 1096, 1305, 1403, 1547
TspGWI	ACGGA	3 cut(s)	206, 1081, 1350
TspRI	CASTG	3 cut(s)	415, 912, 1329
Tth111I	GACNNNGTC	1 cut(s)	1475
VpaK11BI	GGWCC	5 cut(s)	79, 705, 1036, 1267, 1477
XapI	RAATTY	1 cut(s)	127
XceI	RCATGY	2 cut(s)	1029, 1406
XmaJI	CCTAGG	1 cut(s)	1280
XmiI	GTMKAC	2 cut(s)	351, 1588
XspI	CTAG	8 cut(s)	171, 186, 482, 647, 801, 1127, 1281, 1526

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.