Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0002464

Physical Location & Seq

Genomic Coordinates Reverse (-)

54597977 .. 54659294

Gene Structure 61318 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG277200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGGGTATGTTGGGGCTTGTTATCCGAGTAAACTGTCTATTCTTGTTATTGTTCTTGGTATGTTCTACCCCTCCGGAGGACCACATCAAGTGTTCATCGTCAAACAACACAAACTGCACCATCACAAACTCCTACGGCATCTTCCCCGATCGAACTGTCTGTAAAGCGACTAGTGTATCATACCCTAGTACGGAGGAAGAACTCGTTAAGGTAGTGGCTGATGCAACCAAGAACAAGAAGAGCATGAAGGTGGCGACTCGTTACTCCCACAGCATTCCCAAGCTGGTTTGCCCGCGCGGCGAAGATGGGCTGATCATAAGCACCAAAAACCTCAACCGTGTGGTTAAGGTCGACGTTGAAGGGATGACGATGACGGTGGAGAGCGGCGTGACGCTTAGGCAGGTGATCAGTGAGGCTGCCAAAGTTGGCTTGGCGTTGCCTTACGCACCATATTGGTGGGGGCTAACTGTCGGTGGGTTGCTAGGGACTGGTGCGCATGGAAGCACATTATGGGCTAAGGGAAGCTCTGTTCATGATTATGTGGTGGGACTTAGGATTGTGAGTCCAGGAGGGCCCGAAGATGGTTATGTCAAGGTGAGAAGTCTCAGTCAAGGTGATAAAGATCTTAATGCAGCTAAGGTTTCACTTGGAGTCTTAGGAGTAATATCACAGGTTACTCTAAACCTACAACCCATGTTCAAGAGGTCCATCACATATTTGAGCAAGAACGATTCTGACTTGGGAGATCAAGTGCTTAAGTTTGGCAAGCAGCATGAGTTTGCAGACATATTATGGTATCCTAGCCAGCACAAGGCAGTTTATCGAGTAGATGATCGTATCTCCTCAAACACATCCGGAAATGGTTTTTATGATTTCCTTCCTTTTCGAGCAACACCTTCACTTGCACTGGCAGTTATAAGAACGGCAGAGGAGATCCAAGAATCCAAAAGTGATGCTAATGGGAAATGCTCTGGTGCAAAGTTGGTCACATCTGGGCTCCTATCCAGTGCTTATGGTTTGACAAACAATGGTATGATCTTTACTGGATATCCTGTGATTGGATATCAGAACCGGCTTCAAGCATCTGGAACTTGCCTTGATAATCTTCAAGATTCAAGAATCACGGCATGCGCATGGGACTCAAGGATCAAGGGAGAGTTTTTTCATCAAACAACCTTCAGCATCAGCTTGTCCGTGGCCAAAAGCTTCATTCAAGAAGTGCAGAAGCTAGTTGAGATTGAACCCAAATCCCTCTGTGGAGTAGAAATCTACAATGGAATCCTAATGCGCTATGTCACCGCATCAACTGCTTACCTTGGCAAACAAGAAGATGCAATTGACTTCGACATCACTTATTACCGGAGCAAGGACCCCATGACGCCTAGGCTCCATGAAGGCATACTTGAAGAAATAGAGCAATTGGCACTGTTTAAGTACGGGGCACTGCCTCATTGGGGAAAGAATAGGAACATAGCCTTTGCTGGAGTGATGAAGAAGTACAAAAATGGTAAGGAGTTCTTGAGGGTTAAGGAAGTGTATGACCCAATGGGGCTATTCTCTAGTGAATGGAGTGACCAGGTCCTTGGAATTAAGGGTGAGGTGAACTTAGTCATGGAGGGCTGTGCGCTAGAAGGGCTGTGCATTTGCTCAGAGGACATTCATTGTGCCCCAAGCAAGGGCTATTTCTGTAGACCTGGCAAGGTGTTTAGGGATGCAAGGGTTTGCACACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005618 GO:0005623 GO:0005975 GO:0005996 GO:0006082 GO:0006732 GO:0006766 GO:0006767 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009110 GO:0009987 GO:0016051 GO:0016053 GO:0016491 GO:0016614 GO:0016899 GO:0019752 GO:0019852 GO:0019853 GO:0030312 GO:0036094 GO:0042364 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044464 GO:0046364 GO:0046394 GO:0048037 GO:0050105 GO:0050660 GO:0050662 GO:0051186 GO:0051188 GO:0055114 GO:0071704 GO:0071944 GO:0097159 GO:1901265 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ALO FAD_binding_4

Protein Analysis

577

Amino Acids

63.36

Weight (kDa)

8.33

Isoelectric Point (pI)

32.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	59 - 191	3.6e-20	FAD binding domain
ALO	PF04030	388 - 526	1e-10	D-arabinono-1,4-lactone oxidase
GULLO2-like_3rd	PF22906	539 - 576	2.7e-24	L-gulonolactone oxidase 2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002464)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46750 AT2G46760 AT5G56470
fragaria_vesca	FvH4_7g17510 FvH4_7g17511
malus_domestica	MD01G1087800.v1.1 MD07G1157900.v1.1
prunus_persica	Prupe.2G196400_v2.0.a1
pyrus_communis	pycom01g11170 pycom07g15450
rosa_chinensis	RchiOBHm_Chr1g0360921 RchiOBHm_Chr1g0360951 RchiOBHm_Chr3g0481291 RchiOBHm_Chr5g0029651
rosa_laevigata	RLG00000019622 RLG00000027767 RLG00000027769
rosa_multiflora	Rmu_sc0000206.1_g000019 Rmu_sc0000677.1_g000024 Rmu_sc0002207.1_g000003 Rmu_sc0008012.1_g000002
rosa_roxburghii	Rroxscaffold_3G00228090 Rroxscaffold_4G00295680 Rroxscaffold_4G00295700 Rroxscaffold_5G00385060
rosa_rugosa	Rorug01G0283500 Rorug01G0283800 Rorug03G0191000
rosa_samantha	Rh1AG295000 Rh1BG259800 Rh1BG259900 Rh1CG277200 Rh1DG289900 Rh2BG393900 Rh3AG241900 Rh3BG277100 Rh3DG268900
rosa_wichuraiana	Rw1G026070 Rw1G026100 Rw1G026110 Rw3G021610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	917
AarI	CACCTGC	1 cut(s)	391
Acc16I	TGCGCA	2 cut(s)	495, 1132
Acc36I	ACCTGC	1 cut(s)	391
AccBSI	CCGCTC	1 cut(s)	384
AccI	GTMKAC	2 cut(s)	351, 1690
AccII	CGCG	2 cut(s)	295, 297
AccIII	TCCGGA	2 cut(s)	73, 854
AciI	CCGC	4 cut(s)	293, 297, 384, 1299
AclWI	GGATC	2 cut(s)	928, 1154
AcoI	YGGCCR	1 cut(s)	1197
AcuI	CTGAAG	1 cut(s)	1162
AcyI	GRCGYC	1 cut(s)	1379
AfaI	GTAC	3 cut(s)	190, 1436, 1499
AfiI	CCNNNNNNNGG	9 cut(s)	76, 190, 581, 811, 1058, 1366, 1454, 1675, 1676
AflII	CTTAAG	1 cut(s)	755
AgsI	TTSAA	8 cut(s)	359, 700, 1079, 1109, 1116, 1214, 1241, 1406
AhlI	ACTAGT	1 cut(s)	170
AjnI	CCWGG	3 cut(s)	565, 1575, 1693
AloI	GAACNNNNNNTCC	2 cut(s)	513, 545
AluBI	AGCT	6 cut(s)	283, 525, 635, 1188, 1206, 1228
AluI	AGCT	6 cut(s)	283, 525, 635, 1188, 1206, 1228
Alw26I	GTCTC	1 cut(s)	608
AlwI	GGATC	2 cut(s)	928, 1154
Aor13HI	TCCGGA	2 cut(s)	73, 854
AoxI	GGCC	2 cut(s)	572, 1197
ApaI	GGGCCC	1 cut(s)	576
ApeKI	GCWGC	3 cut(s)	416, 632, 769
AspA2I	CCTAGG	1 cut(s)	1382
AspLEI	GCGC	5 cut(s)	297, 496, 1133, 1290, 1627
AspS9I	GGNCC	6 cut(s)	79, 572, 573, 705, 1369, 1579
AsuHPI	GGTGA	6 cut(s)	415, 607, 626, 1288, 1607, 1612
AvaII	GGWCC	4 cut(s)	79, 705, 1369, 1579
AvrII	CCTAGG	1 cut(s)	1382
BaeGI	GKGCMC	3 cut(s)	576, 1444, 1669
BaeI	ACNNNNGTAYC	2 cut(s)	159, 192
BalI	TGGCCA	1 cut(s)	1199
BanII	GRGCYC	2 cut(s)	576, 999
BbvI	GCAGC	3 cut(s)	403, 644, 781
BccI	CCATC	4 cut(s)	128, 299, 575, 716
BceAI	ACGGC	3 cut(s)	151, 939, 1140
BciT130I	CCWGG	3 cut(s)	567, 1577, 1695
BciVI	GTATCC	1 cut(s)	807
BclI	TGATCA	2 cut(s)	312, 405
BcoDI	GTCTC	1 cut(s)	608
BcuI	ACTAGT	1 cut(s)	170
BfaI	CTAG	8 cut(s)	171, 186, 482, 801, 1229, 1383, 1560, 1628
BfmI	CTRYAG	1 cut(s)	1687
BfrI	CTTAAG	1 cut(s)	755
BfuAI	ACCTGC	1 cut(s)	391
BfuI	GTATCC	1 cut(s)	807
BglI	GCCNNNNNGGC	1 cut(s)	297
BglII	AGATCT	1 cut(s)	622
BisI	GCNGC	5 cut(s)	298, 385, 417, 633, 770
BlnI	CCTAGG	1 cut(s)	1382
BlsI	GCNGC	5 cut(s)	299, 386, 418, 634, 771
Bme1390I	CCNGG	3 cut(s)	567, 1577, 1695
Bme18I	GGWCC	4 cut(s)	79, 705, 1369, 1579
BmgT120I	GGNCC	6 cut(s)	79, 572, 573, 705, 1369, 1579
BmiI	GGNNCC	4 cut(s)	574, 998, 1371, 1388
BmrFI	CCNGG	3 cut(s)	567, 1577, 1695
BmsI	GCATC	8 cut(s)	147, 211, 943, 1091, 1191, 1310, 1321, 1702
BpmI	CTGGAG	1 cut(s)	1503
Bpu10I	CCTNAGC	3 cut(s)	395, 516, 636
BpuEI	CTTGAG	2 cut(s)	1126, 1540
BsaBI	GATNNNNATC	1 cut(s)	621
BsaHI	GRCGYC	1 cut(s)	1379
BsaJI	CCNNGG	4 cut(s)	1194, 1315, 1382, 1582
BsaWI	WCCGGW	3 cut(s)	73, 854, 1359
BsaXI	ACNNNNNCTCC	2 cut(s)	735, 765
Bsc4I	CCNNNNNNNGG	9 cut(s)	76, 190, 581, 811, 1058, 1366, 1454, 1675, 1676
Bse118I	RCCGGY	1 cut(s)	1071
Bse1I	ACTGG	4 cut(s)	493, 912, 1005, 1048
Bse8I	GATNNNNATC	1 cut(s)	621
BseAI	TCCGGA	2 cut(s)	73, 854
BseBI	CCWGG	3 cut(s)	567, 1577, 1695
BseDI	CCNNGG	4 cut(s)	1194, 1315, 1382, 1582
BseGI	GGATG	3 cut(s)	369, 851, 1717
BseJI	GATNNNNATC	1 cut(s)	621
BseLI	CCNNNNNNNGG	9 cut(s)	76, 190, 581, 811, 1058, 1366, 1454, 1675, 1676
BseMII	CTCAG	2 cut(s)	619, 1662
BseNI	ACTGG	4 cut(s)	493, 912, 1005, 1048
BseRI	GAGGAG	2 cut(s)	832, 944
BseSI	GKGCMC	3 cut(s)	576, 1444, 1669
BseXI	GCAGC	3 cut(s)	403, 644, 781
BsgI	GTGCAG	2 cut(s)	100, 1241
Bsh1236I	CGCG	2 cut(s)	295, 297
Bsh1285I	CGRYCG	1 cut(s)	151
BshFI	GGCC	2 cut(s)	574, 1199
BsiEI	CGRYCG	1 cut(s)	151
BsiSI	CCGG	4 cut(s)	74, 855, 1072, 1360
BslFI	GGGAC	3 cut(s)	499, 561, 1151
BslI	CCNNNNNNNGG	9 cut(s)	76, 190, 581, 811, 1058, 1366, 1454, 1675, 1676
BsmAI	GTCTC	1 cut(s)	608
BsmFI	GGGAC	3 cut(s)	499, 561, 1151
BsmI	GAATGC	1 cut(s)	273
BsnI	GGCC	2 cut(s)	574, 1199
Bsp120I	GGGCCC	1 cut(s)	572
Bsp1286I	GDGCHC	4 cut(s)	576, 999, 1444, 1669
Bsp13I	TCCGGA	2 cut(s)	73, 854
Bsp143I	GATC	9 cut(s)	148, 312, 405, 622, 745, 832, 933, 1035, 1146
BspACI	CCGC	4 cut(s)	293, 297, 384, 1299
BspANI	GGCC	2 cut(s)	574, 1199
BspCNI	CTCAG	2 cut(s)	618, 1661
BspEI	TCCGGA	2 cut(s)	73, 854
BspFNI	CGCG	2 cut(s)	295, 297
BspHI	TCATGA	1 cut(s)	532
BspLI	GGNNCC	4 cut(s)	574, 998, 1371, 1388
BspMI	ACCTGC	1 cut(s)	391
BspPI	GGATC	2 cut(s)	928, 1154
BspQI	GCTCTTC	1 cut(s)	233
BspTI	CTTAAG	1 cut(s)	755
BsrBI	CCGCTC	1 cut(s)	384
BsrFI	RCCGGY	1 cut(s)	1071
BsrI	ACTGG	4 cut(s)	493, 912, 1005, 1048
BssAI	RCCGGY	1 cut(s)	1071
BssECI	CCNNGG	4 cut(s)	1194, 1315, 1382, 1582
BssMI	GATC	9 cut(s)	148, 312, 405, 622, 745, 832, 933, 1035, 1146
BssNI	GRCGYC	1 cut(s)	1379
BssT1I	CCWWGG	3 cut(s)	1315, 1382, 1582
Bst2UI	CCWGG	3 cut(s)	567, 1577, 1695
Bst4CI	ACNGT	6 cut(s)	35, 157, 338, 376, 469, 1428
Bst6I	CTCTTC	1 cut(s)	233
BstACI	GRCGYC	1 cut(s)	1379
BstAFI	CTTAAG	1 cut(s)	755
BstAPI	GCANNNNNTGC	1 cut(s)	1307
BstC8I	GCNNGC	4 cut(s)	293, 767, 806, 1129
BstDEI	CTNAG	8 cut(s)	395, 516, 551, 605, 636, 655, 1606, 1648
BstDSI	CCRYGG	1 cut(s)	1194
BstF5I	GGATG	3 cut(s)	369, 851, 1717
BstFNI	CGCG	2 cut(s)	295, 297
BstHHI	GCGC	5 cut(s)	297, 496, 1133, 1290, 1627
BstKTI	GATC	9 cut(s)	151, 315, 408, 625, 748, 835, 936, 1038, 1149
BstMAI	GTCTC	1 cut(s)	608
BstMBI	GATC	9 cut(s)	148, 312, 405, 622, 745, 832, 933, 1035, 1146
BstMCI	CGRYCG	1 cut(s)	151
BstMWI	GCNNNNNNNGC	3 cut(s)	297, 1307, 1633
BstNI	CCWGG	3 cut(s)	567, 1577, 1695
BstNSI	RCATGY	1 cut(s)	1131
BstSCI	CCNGG	3 cut(s)	565, 1575, 1693
BstSFI	CTRYAG	1 cut(s)	1687
BstSLI	GKGCMC	3 cut(s)	576, 1444, 1669
BstUI	CGCG	2 cut(s)	295, 297
BstV1I	GCAGC	3 cut(s)	403, 644, 781
BstX2I	RGATCY	2 cut(s)	622, 933
BstXI	CCANNNNNNTGG	2 cut(s)	456, 1583
BstYI	RGATCY	2 cut(s)	622, 933
BsuI	GTATCC	1 cut(s)	807
BsuRI	GGCC	2 cut(s)	574, 1199
BtgI	CCRYGG	1 cut(s)	1194
BtsCI	GGATG	3 cut(s)	369, 851, 1717
BtsI	GCAGTG	1 cut(s)	1442
BtsIMutI	CAGTG	5 cut(s)	415, 905, 1012, 1424, 1442
BveI	ACCTGC	1 cut(s)	391
Cac8I	GCNNGC	4 cut(s)	293, 767, 806, 1129
CciI	TCATGA	1 cut(s)	532
CfoI	GCGC	5 cut(s)	297, 496, 1133, 1290, 1627
Cfr10I	RCCGGY	1 cut(s)	1071
Cfr13I	GGNCC	6 cut(s)	79, 572, 573, 705, 1369, 1579
CseI	GACGC	2 cut(s)	400, 1387
CsiI	ACCWGGT	1 cut(s)	1575
Csp6I	GTAC	3 cut(s)	189, 1435, 1498
CviQI	GTAC	3 cut(s)	189, 1435, 1498
DdeI	CTNAG	8 cut(s)	395, 516, 551, 605, 636, 655, 1606, 1648
DpnI	GATC	9 cut(s)	150, 314, 407, 624, 747, 834, 935, 1037, 1148
DpnII	GATC	9 cut(s)	148, 312, 405, 622, 745, 832, 933, 1035, 1146
EaeI	YGGCCR	1 cut(s)	1197
Eam1104I	CTCTTC	1 cut(s)	233
EarI	CTCTTC	1 cut(s)	233
Eco130I	CCWWGG	3 cut(s)	1315, 1382, 1582
Eco24I	GRGCYC	2 cut(s)	576, 999
Eco32I	GATATC	2 cut(s)	1049, 1064
Eco47I	GGWCC	4 cut(s)	79, 705, 1369, 1579
Eco57I	CTGAAG	1 cut(s)	1162
EcoO109I	RGGNCCY	3 cut(s)	572, 1369, 1579
EcoRII	CCWGG	3 cut(s)	565, 1575, 1693
EcoRV	GATATC	2 cut(s)	1049, 1064
EcoT14I	CCWWGG	3 cut(s)	1315, 1382, 1582
EcoT38I	GRGCYC	2 cut(s)	576, 999
ErhI	CCWWGG	3 cut(s)	1315, 1382, 1582
FalI	AAGNNNNNCTT	4 cut(s)	1386, 1418, 1502, 1534
FaqI	GGGAC	3 cut(s)	499, 561, 1151
FauI	CCCGC	1 cut(s)	300
FbaI	TGATCA	2 cut(s)	312, 405
FblI	GTMKAC	2 cut(s)	351, 1690
Fnu4HI	GCNGC	5 cut(s)	298, 385, 417, 633, 770
FokI	GGATG	3 cut(s)	376, 838, 1724
FriOI	GRGCYC	2 cut(s)	576, 999
Fsp4HI	GCNGC	5 cut(s)	298, 385, 417, 633, 770
FspAI	RTGCGCAY	2 cut(s)	495, 1132
FspBI	CTAG	8 cut(s)	171, 186, 482, 801, 1229, 1383, 1560, 1628
FspI	TGCGCA	2 cut(s)	495, 1132
GlaI	GCGC	5 cut(s)	296, 495, 1132, 1289, 1626
GluI	GCNGC	5 cut(s)	298, 385, 417, 633, 770
GsuI	CTGGAG	1 cut(s)	1503
HaeIII	GGCC	2 cut(s)	574, 1199
HapII	CCGG	4 cut(s)	74, 855, 1072, 1360
HgaI	GACGC	2 cut(s)	400, 1387
HhaI	GCGC	5 cut(s)	297, 496, 1133, 1290, 1627
Hin1I	GRCGYC	1 cut(s)	1379
Hin6I	GCGC	5 cut(s)	295, 494, 1131, 1288, 1625
HinP1I	GCGC	5 cut(s)	295, 494, 1131, 1288, 1625
HincII	GTYRAC	1 cut(s)	352
HindII	GTYRAC	1 cut(s)	352
HindIII	AAGCTT	1 cut(s)	1204
HinfI	GANTC	9 cut(s)	256, 562, 651, 731, 941, 1112, 1119, 1139, 1278
HpaII	CCGG	4 cut(s)	74, 855, 1072, 1360
HphI	GGTGA	6 cut(s)	415, 607, 626, 1288, 1607, 1612
Hpy166II	GTNNAC	4 cut(s)	31, 352, 1603, 1691
Hpy188I	TCNGA	4 cut(s)	26, 736, 1068, 1651
Hpy188III	TCNNGA	9 cut(s)	74, 533, 700, 855, 1086, 1109, 1116, 1214, 1519
Hpy8I	GTNNAC	4 cut(s)	31, 352, 1603, 1691
Hpy99I	CGWCG	1 cut(s)	356
HpyAV	CCTTC	7 cut(s)	241, 353, 887, 906, 1186, 1388, 1625
HpyCH4III	ACNGT	6 cut(s)	35, 157, 338, 376, 469, 1428
HpyCH4IV	ACGT	1 cut(s)	354
HpyF10VI	GCNNNNNNNGC	3 cut(s)	297, 1307, 1633
HpyF3I	CTNAG	8 cut(s)	395, 516, 551, 605, 636, 655, 1606, 1648
HpySE526I	ACGT	1 cut(s)	354
Hsp92I	GRCGYC	1 cut(s)	1379
HspAI	GCGC	5 cut(s)	295, 494, 1131, 1288, 1625
Kpn2I	TCCGGA	2 cut(s)	73, 854
Ksp22I	TGATCA	2 cut(s)	312, 405
Kzo9I	GATC	9 cut(s)	148, 312, 405, 622, 745, 832, 933, 1035, 1146
LguI	GCTCTTC	1 cut(s)	233
LmnI	GCTCC	3 cut(s)	1002, 1362, 1392
Lsp1109I	GCAGC	3 cut(s)	403, 644, 781
LweI	GCATC	8 cut(s)	147, 211, 943, 1091, 1191, 1310, 1321, 1702
MabI	ACCWGGT	1 cut(s)	1575
MaeI	CTAG	8 cut(s)	171, 186, 482, 801, 1229, 1383, 1560, 1628
MaeII	ACGT	1 cut(s)	354
MaeIII	GTNAC	6 cut(s)	260, 388, 673, 985, 1294, 1571
MalI	GATC	9 cut(s)	150, 314, 407, 624, 747, 834, 935, 1037, 1148
MbiI	CCGCTC	1 cut(s)	384
MboI	GATC	9 cut(s)	148, 312, 405, 622, 745, 832, 933, 1035, 1146
MboII	GAAGA	9 cut(s)	133, 209, 250, 314, 590, 1097, 1340, 1418, 1504
MfeI	CAATTG	2 cut(s)	1335, 1418
MflI	RGATCY	2 cut(s)	622, 933
MhlI	GDGCHC	4 cut(s)	576, 999, 1444, 1669
MlsI	TGGCCA	1 cut(s)	1199
MluCI	AATT	3 cut(s)	1335, 1418, 1587
MluNI	TGGCCA	1 cut(s)	1199
MlyI	GAGTC	4 cut(s)	250, 571, 660, 1133
Mox20I	TGGCCA	1 cut(s)	1199
MroI	TCCGGA	2 cut(s)	73, 854
MscI	TGGCCA	1 cut(s)	1199
MseI	TTAA	7 cut(s)	207, 345, 627, 756, 1431, 1527, 1590
MslI	CAYNNNNRTG	4 cut(s)	248, 454, 537, 1132
Msp20I	TGGCCA	1 cut(s)	1199
MspCI	CTTAAG	1 cut(s)	755
MspI	CCGG	4 cut(s)	74, 855, 1072, 1360
MspR9I	CCNGG	3 cut(s)	567, 1577, 1695
MunI	CAATTG	2 cut(s)	1335, 1418
Mva1269I	GAATGC	1 cut(s)	273
MvaI	CCWGG	3 cut(s)	567, 1577, 1695
MvnI	CGCG	2 cut(s)	295, 297
MwoI	GCNNNNNNNGC	3 cut(s)	297, 1307, 1633
NdeII	GATC	9 cut(s)	148, 312, 405, 622, 745, 832, 933, 1035, 1146
NlaIV	GGNNCC	4 cut(s)	574, 998, 1371, 1388
NmuCI	GTSAC	4 cut(s)	388, 985, 1294, 1571
NsbI	TGCGCA	2 cut(s)	495, 1132
NspI	RCATGY	1 cut(s)	1131
PaeI	GCATGC	1 cut(s)	1131
PagI	TCATGA	1 cut(s)	532
PaqCI	CACCTGC	1 cut(s)	391
PciSI	GCTCTTC	1 cut(s)	233
PctI	GAATGC	1 cut(s)	273
PfeI	GAWTC	5 cut(s)	731, 941, 1112, 1119, 1278
PflFI	GACNNNGTC	1 cut(s)	1577
PfoI	TCCNGGA	1 cut(s)	565
PkrI	GCNGC	5 cut(s)	299, 386, 418, 634, 771
Ple19I	CGATCG	1 cut(s)	151
PleI	GAGTC	4 cut(s)	250, 570, 659, 1133
PpsI	GAGTC	4 cut(s)	250, 570, 659, 1133
PpuMI	RGGWCCY	2 cut(s)	1369, 1579
PsiI	TTATAA	1 cut(s)	917
Psp5II	RGGWCCY	2 cut(s)	1369, 1579
Psp6I	CCWGG	3 cut(s)	565, 1575, 1693
PspGI	CCWGG	3 cut(s)	565, 1575, 1693
PspN4I	GGNNCC	4 cut(s)	574, 998, 1371, 1388
PspOMI	GGGCCC	1 cut(s)	572
PspPI	GGNCC	6 cut(s)	79, 572, 573, 705, 1369, 1579
PspPPI	RGGWCCY	2 cut(s)	1369, 1579
PsuI	RGATCY	2 cut(s)	622, 933
PsyI	GACNNNGTC	1 cut(s)	1577
PvuI	CGATCG	1 cut(s)	151
RsaI	GTAC	3 cut(s)	190, 1436, 1499
RsaNI	GTAC	3 cut(s)	189, 1435, 1498
RseI	CAYNNNNRTG	4 cut(s)	248, 454, 537, 1132
SalI	GTCGAC	1 cut(s)	350
SapI	GCTCTTC	1 cut(s)	233
SaqAI	TTAA	7 cut(s)	207, 345, 627, 756, 1431, 1527, 1590
SatI	GCNGC	5 cut(s)	298, 385, 417, 633, 770
Sau3AI	GATC	9 cut(s)	148, 312, 405, 622, 745, 832, 933, 1035, 1146
Sau96I	GGNCC	6 cut(s)	79, 572, 573, 705, 1369, 1579
SchI	GAGTC	4 cut(s)	250, 571, 660, 1133
ScrFI	CCNGG	3 cut(s)	567, 1577, 1695
SduI	GDGCHC	4 cut(s)	576, 999, 1444, 1669
SexAI	ACCWGGT	1 cut(s)	1575
SfaNI	GCATC	8 cut(s)	147, 211, 943, 1091, 1191, 1310, 1321, 1702
SfcI	CTRYAG	1 cut(s)	1687
SinI	GGWCC	4 cut(s)	79, 705, 1369, 1579
SmiMI	CAYNNNNRTG	4 cut(s)	248, 454, 537, 1132
SmlI	CTYRAG	3 cut(s)	755, 1141, 1519
SmoI	CTYRAG	3 cut(s)	755, 1141, 1519
SpeI	ACTAGT	1 cut(s)	170
SphI	GCATGC	1 cut(s)	1131
Sse9I	AATT	3 cut(s)	1335, 1418, 1587
SsiI	CCGC	4 cut(s)	293, 297, 384, 1299
SspMI	CTAG	8 cut(s)	171, 186, 482, 801, 1229, 1383, 1560, 1628
StyD4I	CCNGG	3 cut(s)	565, 1575, 1693
StyI	CCWWGG	3 cut(s)	1315, 1382, 1582
TaaI	ACNGT	6 cut(s)	35, 157, 338, 376, 469, 1428
TaiI	ACGT	1 cut(s)	357
TaqI	TCGA	5 cut(s)	151, 351, 823, 886, 1344
TasI	AATT	3 cut(s)	1335, 1418, 1587
TatI	WGTACW	1 cut(s)	1497
TauI	GCSGC	2 cut(s)	300, 387
TfiI	GAWTC	5 cut(s)	731, 941, 1112, 1119, 1278
Tru1I	TTAA	7 cut(s)	207, 345, 627, 756, 1431, 1527, 1590
Tru9I	TTAA	7 cut(s)	207, 345, 627, 756, 1431, 1527, 1590
TscAI	CASTG	5 cut(s)	415, 912, 1012, 1431, 1449
TseFI	GTSAC	4 cut(s)	388, 985, 1294, 1571
TseI	GCWGC	3 cut(s)	416, 632, 769
Tsp45I	GTSAC	4 cut(s)	388, 985, 1294, 1571
TspDTI	ATGAA	8 cut(s)	84, 260, 521, 1154, 1198, 1407, 1505, 1649
TspGWI	ACGGA	2 cut(s)	206, 1183
TspRI	CASTG	5 cut(s)	415, 912, 1012, 1431, 1449
Tth111I	GACNNNGTC	1 cut(s)	1577
Vha464I	CTTAAG	1 cut(s)	755
VpaK11BI	GGWCC	4 cut(s)	79, 705, 1369, 1579
XceI	RCATGY	1 cut(s)	1131
XcmI	CCANNNNNNNNNTGG	1 cut(s)	427
XmaJI	CCTAGG	1 cut(s)	1382
XmiI	GTMKAC	2 cut(s)	351, 1690
XspI	CTAG	8 cut(s)	171, 186, 482, 801, 1229, 1383, 1560, 1628

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.