Rmu_sc0001301.1_g000015

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001301.1
OG0006232
Physical Location & Seq
Forward (+)
45833 .. 49982
4150 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2415 bp
atgggaagaaactacccttgggaccccagaagtagccggaaaaggccgccggagttagaggcaaagcagcagccgaccactgccaacggcgtcgggattacggcaaggcctctgacgagcatgaaatggatcacttcaggtgctgtccttcttggggatttatcaggggttgagttaaggcagctccatgcccacctcattcaaaattccctccaccaccaaaaccaatgggtgtcattgctcatcaaccaatgcacgcgcctccgtgcaccgccgccttatacccgtctcatcttcgactctacgcctcgccccaacatccatgtcttcacctccatgctcaaatattacgcccctttgggcaatgtttgctctaatcaagttgtttcactatatcaactaatgcagcgttgcgaggacgtatgtcttggtacctttgtgtacccagttttgatcaaatcgtcgggcagtgccggcattgcgttccacgcgcatgtagtgaagttgggtcttggttctgatcgttatgttcgcaatgccatcatgagtgtgtattcgaaatatgggccggttgagcatgcccgagacgtgttcgatgaaatgcctgagaggagtcttgtggattggaacaacatgatttctgggtattggaagtgggggaataaagttgaagcgtgtaaactgtttgttatgatgcctgagaagagtgttgttacttggactgctatggttaccgggtacgctaggatgaaggatttggagaatgcaagaaggtattttgataatattccggagaaaaatgtggtgtcgtggaatgcaatgctctcggcttatgctcagaatggatctccagaggaggctttgagattgtttgatggcatgatggattctggagataaaccaaatgaaactacatgggcaattgtcatttcagcgtgttcgtcatgtggtaatagttccattgcagattcgtttatccaaaagctcaaccagaagcggatgcatttaagttattatggcaaaactgcgatgcttgatatgtatgcaaagcgtgggagcatcaagaatgctagagaagtttttgatgaattgggggtgtataagagctctgggacgtggaatgccatgatatcagcatatgcaagagttgggaatttgacttcggctagagagctctttgataagatgccggaaagagatgttgtctcatggaactcgatgatttctggctatgctcagaatggacagtccactcttgcaattgatctcttcaaagatatgactgctgctgataaccccaaaccaaatgaagtcactatggtcagtgtcatctcagcatgtgggcatcttggggcattggagataggtaattgggctgtcaactttctcacaaaacatcataccaatctaagtatatcagtatacaattctttgatattcttgtactctaaatgtggaagcatggatgatgccaagagaatattcaacgaaatgaaacaacgagatgtggtttcctacaatacattgatttcagggtttgcagctcatggtcatggaatggaagctgtcaagctaaagatgaagatgaaagaagaatttattgagccaaaccgtgaaacgtatattggtattctgacagcgtgcagccatgctgggttgttagaagaaggttggaagatctttgagtcgatcaaagatcctgatgtagatcattatgcatgcgtggttgacttattaggtcgagtgggtaaagtggatgaggcaaaaaaaatagttgatggcatgcagaaagagccacatgctggagtttatggatctcttttaaatgctagccggattcacaaaaggattgatcttggggagtttgctgcaagcaagctctttgagcttgaaccacataattcaggaaactacattttgctttcgaacatatatgcctctgcaggcagctgggacgatgtggtgagagttagagaagcaatgagaaatgcaggtgtgaaaaaggcaactggttggagttgggtggaatacaatggtaagatgcacaagttcattgcgggagacagatcacacgaactgtcagatgaaatttataggcgattggctgaattagggaggaagctgaggaatgctggctacattgctgataaggcctgtgtgctaagagatgttgatgaggaagagaaagaagagatggtgggtactcatagtgaaaaattggcggtatgcttctctcttcttgttacagaagcaaagtcaatgattagagtggtgaagaatctgagggtgtgcagggattgccatacagctattaagatgatatctaagttggaaggaaggaaaattattttgagggataataacaggtttcaccatttcagtgatgggcaatgttcttgcggagagtattggtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

804

Amino Acids

90.5

Weight (kDa)

8.6

Isoelectric Point (pI)

36.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 266 - 314 6.1e-13 PPR repeat family
PPR PF01535 269 - 298 1.3e-08 PPR repeat
PPR PF01535 372 - 400 8.8e-08 PPR repeat
PPR_2 PF13041 399 - 448 1.4e-10 PPR repeat family
PPR PF01535 402 - 428 2.1e-07 PPR repeat
PPR_2 PF13041 472 - 503 3.7e-06 PPR repeat family
PPR PF01535 474 - 502 4.6e-07 PPR repeat
PPR_2 PF13041 501 - 549 5.1e-11 PPR repeat family
PPR_3 PF13812 501 - 548 1.2e-06 Pentatricopeptide repeat domain
E_motif PF20431 614 - 676 1.8e-22 E motif
DYW_deaminase PF14432 712 - 804 1.3e-39 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1982
Acc36I ACCTGC 1 cut(s) 1982
Acc65I GGTACC 1 cut(s) 431
AccB1I GGYRCC 1 cut(s) 431
AccB7I CCANNNNNTGG 1 cut(s) 1802
AccI GTMKAC 1 cut(s) 1422
AccII CGCG 2 cut(s) 259, 491
AccIII TCCGGA 1 cut(s) 790
AciI CCGC 7 cut(s) 47, 272, 275, 997, 2057, 2222, 2400
AclWI GGATC 4 cut(s) 137, 853, 1691, 1822
AcsI RAATTY 4 cut(s) 205, 1153, 1595, 2088
AcuI CTGAAG 1 cut(s) 120
AcyI GRCGYC 1 cut(s) 90
AfaI GTAC 5 cut(s) 433, 443, 740, 1445, 2203
AfiI CCNNNNNNNGG 2 cut(s) 154, 1802
AflIII ACRYGT 1 cut(s) 588
AgsI TTSAA 5 cut(s) 203, 671, 1273, 1486, 1892
AjiI CACGTC 2 cut(s) 589, 1116
AjuI GAANNNNNNNTTGG 5 cut(s) 33, 1466, 1498, 1608, 1640
Alw21I GWGCWC 3 cut(s) 271, 1109, 1176
Alw26I GTCTC 4 cut(s) 293, 579, 1210, 2055
Alw44I GTGCAC 1 cut(s) 267
AlwI GGATC 4 cut(s) 137, 853, 1691, 1822
AlwNI CAGNNNCTG 1 cut(s) 143
Ama87I CYCGRG 1 cut(s) 582
Aor13HI TCCGGA 1 cut(s) 790
AoxI GGCC 4 cut(s) 44, 107, 566, 2151
ApaLI GTGCAC 1 cut(s) 267
ApeKI GCWGC 9 cut(s) 67, 70, 181, 406, 1286, 1541, 1644, 1868, 1947
ApoI RAATTY 4 cut(s) 205, 1153, 1595, 2088
Asp718I GGTACC 1 cut(s) 431
AspLEI GCGC 2 cut(s) 261, 493
AspS9I GGNCC 2 cut(s) 22, 566
AsuC2I CCSGG 1 cut(s) 736
AsuHPI GGTGA 4 cut(s) 322, 1975, 2284, 2363
AsuII TTCGAA 2 cut(s) 557, 1925
AsuNHI GCTAGC 1 cut(s) 1829
AvaI CYCGRG 1 cut(s) 582
AvaII GGWCC 1 cut(s) 22
BaeGI GKGCMC 1 cut(s) 271
BaeI ACNNNNGTAYC 2 cut(s) 423, 456
BanI GGYRCC 1 cut(s) 431
BanII GRGCYC 2 cut(s) 1109, 1176
BbsI GAAGAC 1 cut(s) 319
Bbv12I GWGCWC 3 cut(s) 271, 1109, 1176
BbvCI CCTCAGC 1 cut(s) 2123
BbvI GCAGC 9 cut(s) 79, 82, 193, 418, 1273, 1553, 1656, 1855, 1959
BccI CCATC 6 cut(s) 548, 869, 877, 1772, 2188, 2378
BceAI ACGGC 2 cut(s) 103, 117
BcgI CGANNNNNNTGC 2 cut(s) 807, 841
BclI TGATCA 1 cut(s) 453
BcnI CCSGG 1 cut(s) 736
BcoDI GTCTC 4 cut(s) 293, 579, 1210, 2055
BfaI CTAG 4 cut(s) 744, 1071, 1167, 1830
BfmI CTRYAG 1 cut(s) 1941
BfuAI ACCTGC 1 cut(s) 1982
BglII AGATCT 1 cut(s) 1677
Bme1390I CCNGG 1 cut(s) 736
Bme18I GGWCC 1 cut(s) 22
BmeT110I CYCGRG 1 cut(s) 582
BmgBI CACGTC 2 cut(s) 589, 1116
BmgT120I GGNCC 2 cut(s) 22, 566
BmiI GGNNCC 3 cut(s) 23, 24, 433
BmrFI CCNGG 1 cut(s) 736
BmrI ACTGGG 1 cut(s) 440
BmsI GCATC 8 cut(s) 684, 990, 1020, 1068, 1176, 1354, 1459, 2031
BmtI GCTAGC 1 cut(s) 1833
BmuI ACTGGG 1 cut(s) 440
BoxI GACNNNNGTC 1 cut(s) 423
BpiI GAAGAC 1 cut(s) 319
BpmI CTGGAG 3 cut(s) 834, 912, 1824
Bpu10I CCTNAGC 1 cut(s) 2123
Bpu14I TTCGAA 2 cut(s) 557, 1925
BpuMI CCSGG 1 cut(s) 736
BsaBI GATNNNNATC 1 cut(s) 1707
BsaHI GRCGYC 1 cut(s) 90
BsaJI CCNNGG 1 cut(s) 17
BsaWI WCCGGW 1 cut(s) 790
Bsc4I CCNNNNNNNGG 2 cut(s) 154, 1802
Bse118I RCCGGY 2 cut(s) 473, 568
Bse1I ACTGG 2 cut(s) 446, 2014
Bse8I GATNNNNATC 1 cut(s) 1707
BseAI TCCGGA 1 cut(s) 790
BseDI CCNNGG 1 cut(s) 17
BseGI GGATG 5 cut(s) 318, 753, 1005, 1471, 1762
BseJI GATNNNNATC 1 cut(s) 1707
BseLI CCNNNNNNNGG 2 cut(s) 154, 1802
BseMII CTCAG 7 cut(s) 597, 690, 851, 1250, 1347, 2114, 2273
BseNI ACTGG 2 cut(s) 446, 2014
BseRI GAGGAG 2 cut(s) 625, 869
BseSI GKGCMC 1 cut(s) 271
BseXI GCAGC 9 cut(s) 79, 82, 193, 418, 1273, 1553, 1656, 1855, 1959
BseYI CCCAGC 2 cut(s) 1652, 1950
BsgI GTGCAG 2 cut(s) 1663, 2311
Bsh1236I CGCG 2 cut(s) 259, 491
BshFI GGCC 4 cut(s) 46, 109, 568, 2153
BshNI GGYRCC 1 cut(s) 431
BsiHKAI GWGCWC 3 cut(s) 271, 1109, 1176
BsiHKCI CYCGRG 1 cut(s) 582
BsiSI CCGG 8 cut(s) 37, 50, 474, 569, 735, 791, 1190, 1834
BslFI GGGAC 3 cut(s) 35, 1126, 1967
BslI CCNNNNNNNGG 2 cut(s) 154, 1802
BsmAI GTCTC 4 cut(s) 293, 579, 1210, 2055
BsmBI CGTCTC 2 cut(s) 293, 579
BsmFI GGGAC 3 cut(s) 35, 1126, 1967
BsmI GAATGC 5 cut(s) 769, 820, 1072, 1126, 2134
BsnI GGCC 4 cut(s) 46, 109, 568, 2153
BsoBI CYCGRG 1 cut(s) 582
Bsp119I TTCGAA 2 cut(s) 557, 1925
Bsp1286I GDGCHC 3 cut(s) 271, 1109, 1176
Bsp13I TCCGGA 1 cut(s) 790
BspACI CCGC 7 cut(s) 47, 272, 275, 997, 2057, 2222, 2400
BspANI GGCC 4 cut(s) 46, 109, 568, 2153
BspCNI CTCAG 7 cut(s) 598, 691, 850, 1249, 1346, 2115, 2274
BspEI TCCGGA 1 cut(s) 790
BspFNI CGCG 2 cut(s) 259, 491
BspHI TCATGA 1 cut(s) 543
BspLI GGNNCC 3 cut(s) 23, 24, 433
BspMAI CTGCAG 1 cut(s) 1945
BspMI ACCTGC 1 cut(s) 1982
BspOI GCTAGC 1 cut(s) 1833
BspPI GGATC 4 cut(s) 137, 853, 1691, 1822
BspT104I TTCGAA 2 cut(s) 557, 1925
BspT107I GGYRCC 1 cut(s) 431
BsrFI RCCGGY 2 cut(s) 473, 568
BsrI ACTGG 2 cut(s) 446, 2014
BssAI RCCGGY 2 cut(s) 473, 568
BssECI CCNNGG 1 cut(s) 17
BssNAI GTATAC 1 cut(s) 1423
BssNI GRCGYC 1 cut(s) 90
BssT1I CCWWGG 1 cut(s) 17
Bst1107I GTATAC 1 cut(s) 1423
Bst4CI ACNGT 4 cut(s) 684, 1248, 1613, 2079
Bst6I CTCTTC 5 cut(s) 698, 1274, 2175, 2184, 2241
BstACI GRCGYC 1 cut(s) 90
BstAPI GCANNNNNTGC 2 cut(s) 369, 2298
BstBI TTCGAA 2 cut(s) 557, 1925
BstEII GGTNACC 1 cut(s) 730
BstF5I GGATG 5 cut(s) 318, 753, 1005, 1471, 1762
BstFNI CGCG 2 cut(s) 259, 491
BstHHI GCGC 2 cut(s) 261, 493
BstMAI GTCTC 4 cut(s) 293, 579, 1210, 2055
BstMWI GCNNNNNNNGC 9 cut(s) 369, 474, 479, 488, 574, 1792, 1885, 2150, 2298
BstNSI RCATGY 6 cut(s) 497, 581, 1341, 1722, 1786, 1802
BstPAI GACNNNNGTC 1 cut(s) 423
BstPI GGTNACC 1 cut(s) 730
BstSCI CCNGG 1 cut(s) 734
BstSFI CTRYAG 1 cut(s) 1941
BstSLI GKGCMC 1 cut(s) 271
BstUI CGCG 2 cut(s) 259, 491
BstV1I GCAGC 9 cut(s) 79, 82, 193, 418, 1273, 1553, 1656, 1855, 1959
BstV2I GAAGAC 1 cut(s) 319
BstX2I RGATCY 4 cut(s) 845, 1677, 1696, 1814
BstYI RGATCY 4 cut(s) 845, 1677, 1696, 1814
BstZ17I GTATAC 1 cut(s) 1423
BsuRI GGCC 4 cut(s) 46, 109, 568, 2153
BtgZI GCGATG 1 cut(s) 1043
BtrI CACGTC 2 cut(s) 589, 1116
BtsCI GGATG 5 cut(s) 318, 753, 1005, 1471, 1762
BtsI GCAGTG 2 cut(s) 78, 475
BtsIMutI CAGTG 4 cut(s) 78, 475, 1330, 2386
BveI ACCTGC 1 cut(s) 1982
CaiI CAGNNNCTG 1 cut(s) 143
CciI TCATGA 1 cut(s) 543
CfoI GCGC 2 cut(s) 261, 493
Cfr10I RCCGGY 2 cut(s) 473, 568
Cfr13I GGNCC 2 cut(s) 22, 566
CseI GACGC 1 cut(s) 79
Csp6I GTAC 5 cut(s) 432, 442, 739, 1444, 2202
CviQI GTAC 5 cut(s) 432, 442, 739, 1444, 2202
DraI TTTAAA 1 cut(s) 1824
Eam1104I CTCTTC 5 cut(s) 698, 1274, 2175, 2184, 2241
EarI CTCTTC 5 cut(s) 698, 1274, 2175, 2184, 2241
Ecl136II GAGCTC 2 cut(s) 1107, 1174
Eco130I CCWWGG 1 cut(s) 17
Eco147I AGGCCT 2 cut(s) 109, 2153
Eco24I GRGCYC 2 cut(s) 1109, 1176
Eco32I GATATC 2 cut(s) 1131, 2322
Eco47I GGWCC 1 cut(s) 22
Eco53kI GAGCTC 2 cut(s) 1107, 1174
Eco57I CTGAAG 1 cut(s) 120
Eco88I CYCGRG 1 cut(s) 582
Eco91I GGTNACC 1 cut(s) 730
EcoICRI GAGCTC 2 cut(s) 1107, 1174
EcoO109I RGGNCCY 1 cut(s) 22
EcoO65I GGTNACC 1 cut(s) 730
EcoRV GATATC 2 cut(s) 1131, 2322
EcoT14I CCWWGG 1 cut(s) 17
EcoT22I ATGCAT 2 cut(s) 1005, 1720
EcoT38I GRGCYC 2 cut(s) 1109, 1176
ErhI CCWWGG 1 cut(s) 17
Esp3I CGTCTC 2 cut(s) 293, 579
FaqI GGGAC 3 cut(s) 35, 1126, 1967
FauI CCCGC 1 cut(s) 2050
FauNDI CATATG 1 cut(s) 1138
FbaI TGATCA 1 cut(s) 453
FblI GTMKAC 1 cut(s) 1422
FokI GGATG 5 cut(s) 305, 760, 1012, 1478, 1769
FriOI GRGCYC 2 cut(s) 1109, 1176
FspBI CTAG 4 cut(s) 744, 1071, 1167, 1830
GlaI GCGC 2 cut(s) 260, 492
GsaI CCCAGC 2 cut(s) 1656, 1954
GsuI CTGGAG 3 cut(s) 834, 912, 1824
HaeIII GGCC 4 cut(s) 46, 109, 568, 2153
HapII CCGG 8 cut(s) 37, 50, 474, 569, 735, 791, 1190, 1834
HgaI GACGC 1 cut(s) 79
HhaI GCGC 2 cut(s) 261, 493
Hin1I GRCGYC 1 cut(s) 90
Hin6I GCGC 2 cut(s) 259, 491
HinP1I GCGC 2 cut(s) 259, 491
HincII GTYRAC 2 cut(s) 1381, 1729
HindII GTYRAC 2 cut(s) 1381, 1729
HinfI GANTC 7 cut(s) 299, 613, 887, 968, 1685, 1837, 2278
HpaII CCGG 8 cut(s) 37, 50, 474, 569, 735, 791, 1190, 1834
HphI GGTGA 4 cut(s) 322, 1975, 2284, 2363
Hpy166II GTNNAC 7 cut(s) 269, 442, 680, 1251, 1381, 1423, 1729
Hpy188I TCNGA 7 cut(s) 114, 520, 840, 1239, 1635, 2083, 2283
Hpy188III TCNNGA 8 cut(s) 94, 544, 791, 851, 891, 1063, 1700, 1905
Hpy8I GTNNAC 7 cut(s) 269, 442, 680, 1251, 1381, 1423, 1729
Hpy99I CGWCG 2 cut(s) 95, 466
HpyAV CCTTC 6 cut(s) 158, 745, 765, 1661, 2327, 2331
HpyCH4III ACNGT 4 cut(s) 684, 1248, 1613, 2079
HpyCH4IV ACGT 4 cut(s) 420, 588, 1115, 1619
HpyF10VI GCNNNNNNNGC 9 cut(s) 369, 474, 479, 488, 574, 1792, 1885, 2150, 2298
HpySE526I ACGT 4 cut(s) 420, 588, 1115, 1619
Hsp92I GRCGYC 1 cut(s) 90
HspAI GCGC 2 cut(s) 259, 491
KflI GGGWCCC 1 cut(s) 22
Kpn2I TCCGGA 1 cut(s) 790
KpnI GGTACC 1 cut(s) 435
KroI GCCGGC 1 cut(s) 473
KroNI GCCGGC 1 cut(s) 475
Ksp22I TGATCA 1 cut(s) 453
LmnI GCTCC 2 cut(s) 189, 1056
Lsp1109I GCAGC 9 cut(s) 79, 82, 193, 418, 1273, 1553, 1656, 1855, 1959
LweI GCATC 8 cut(s) 684, 990, 1020, 1068, 1176, 1354, 1459, 2031
MaeI CTAG 4 cut(s) 744, 1071, 1167, 1830
MaeII ACGT 4 cut(s) 420, 588, 1115, 1619
MaeIII GTNAC 4 cut(s) 712, 730, 1312, 2242
MfeI CAATTG 2 cut(s) 921, 1260
MflI RGATCY 4 cut(s) 845, 1677, 1696, 1814
MhlI GDGCHC 3 cut(s) 271, 1109, 1176
MlyI GAGTC 3 cut(s) 293, 622, 1694
MmeI TCCRAC 3 cut(s) 1652, 1994, 2310
Mph1103I ATGCAT 2 cut(s) 1005, 1720
MroI TCCGGA 1 cut(s) 790
MroNI GCCGGC 1 cut(s) 473
MseI TTAA 4 cut(s) 176, 1007, 1823, 2313
MslI CAYNNNNRTG 5 cut(s) 335, 492, 548, 1551, 2379
MspA1I CMGCKG 1 cut(s) 1950
MspI CCGG 8 cut(s) 37, 50, 474, 569, 735, 791, 1190, 1834
MspR9I CCNGG 1 cut(s) 736
MunI CAATTG 2 cut(s) 921, 1260
Mva1269I GAATGC 5 cut(s) 769, 820, 1072, 1126, 2134
MvnI CGCG 2 cut(s) 259, 491
MwoI GCNNNNNNNGC 9 cut(s) 369, 474, 479, 488, 574, 1792, 1885, 2150, 2298
NaeI GCCGGC 1 cut(s) 475
NciI CCSGG 1 cut(s) 736
NdeI CATATG 1 cut(s) 1138
NgoMIV GCCGGC 1 cut(s) 473
NheI GCTAGC 1 cut(s) 1829
NlaIV GGNNCC 3 cut(s) 23, 24, 433
NmeAIII GCCGAG 1 cut(s) 806
NmuCI GTSAC 1 cut(s) 1312
NsiI ATGCAT 2 cut(s) 1005, 1720
NspI RCATGY 6 cut(s) 497, 581, 1341, 1722, 1786, 1802
NspV TTCGAA 2 cut(s) 557, 1925
PaeI GCATGC 3 cut(s) 581, 1722, 1786
PagI TCATGA 1 cut(s) 543
PaqCI CACCTGC 1 cut(s) 1982
PceI AGGCCT 2 cut(s) 109, 2153
PctI GAATGC 5 cut(s) 769, 820, 1072, 1126, 2134
PdiI GCCGGC 1 cut(s) 475
PfeI GAWTC 4 cut(s) 887, 968, 1837, 2278
PflMI CCANNNNNTGG 1 cut(s) 1802
PleI GAGTC 3 cut(s) 293, 621, 1693
PpsI GAGTC 3 cut(s) 293, 621, 1693
PpuMI RGGWCCY 1 cut(s) 22
PshAI GACNNNNGTC 1 cut(s) 423
Psp124BI GAGCTC 2 cut(s) 1109, 1176
Psp5II RGGWCCY 1 cut(s) 22
PspEI GGTNACC 1 cut(s) 730
PspFI CCCAGC 2 cut(s) 1652, 1950
PspN4I GGNNCC 3 cut(s) 23, 24, 433
PspPI GGNCC 2 cut(s) 22, 566
PspPPI RGGWCCY 1 cut(s) 22
PstI CTGCAG 1 cut(s) 1945
PstNI CAGNNNCTG 1 cut(s) 143
PsuI RGATCY 4 cut(s) 845, 1677, 1696, 1814
PvuII CAGCTG 1 cut(s) 1950
RsaI GTAC 5 cut(s) 433, 443, 740, 1445, 2203
RsaNI GTAC 5 cut(s) 432, 442, 739, 1444, 2202
RseI CAYNNNNRTG 5 cut(s) 335, 492, 548, 1551, 2379
SacI GAGCTC 2 cut(s) 1109, 1176
SaqAI TTAA 4 cut(s) 176, 1007, 1823, 2313
Sau96I GGNCC 2 cut(s) 22, 566
SchI GAGTC 3 cut(s) 293, 622, 1694
ScrFI CCNGG 1 cut(s) 736
SduI GDGCHC 3 cut(s) 271, 1109, 1176
SfaNI GCATC 8 cut(s) 684, 990, 1020, 1068, 1176, 1354, 1459, 2031
SfcI CTRYAG 1 cut(s) 1941
SfuI TTCGAA 2 cut(s) 557, 1925
SinI GGWCC 1 cut(s) 22
SmiMI CAYNNNNRTG 5 cut(s) 335, 492, 548, 1551, 2379
SphI GCATGC 3 cut(s) 581, 1722, 1786
SseBI AGGCCT 2 cut(s) 109, 2153
SsiI CCGC 7 cut(s) 47, 272, 275, 997, 2057, 2222, 2400
SspI AATATT 3 cut(s) 347, 787, 1482
SspMI CTAG 4 cut(s) 744, 1071, 1167, 1830
SstI GAGCTC 2 cut(s) 1109, 1176
StuI AGGCCT 2 cut(s) 109, 2153
StyD4I CCNGG 1 cut(s) 734
StyI CCWWGG 1 cut(s) 17
TaaI ACNGT 4 cut(s) 684, 1248, 1613, 2079
TaiI ACGT 4 cut(s) 423, 591, 1118, 1622
TaqI TCGA 7 cut(s) 297, 557, 594, 1217, 1688, 1741, 1925
TatI WGTACW 1 cut(s) 1443
TauI GCSGC 2 cut(s) 49, 277
TfiI GAWTC 4 cut(s) 887, 968, 1837, 2278
Tru1I TTAA 4 cut(s) 176, 1007, 1823, 2313
Tru9I TTAA 4 cut(s) 176, 1007, 1823, 2313
TscAI CASTG 4 cut(s) 85, 475, 1330, 2386
TseFI GTSAC 1 cut(s) 1312
TseI GCWGC 9 cut(s) 67, 70, 181, 406, 1286, 1541, 1644, 1868, 1947
Tsp45I GTSAC 1 cut(s) 1312
TspGWI ACGGA 1 cut(s) 254
TspRI CASTG 4 cut(s) 85, 475, 1330, 2386
Van91I CCANNNNNTGG 1 cut(s) 1802
VneI GTGCAC 1 cut(s) 267
VpaK11BI GGWCC 1 cut(s) 22
XapI RAATTY 4 cut(s) 205, 1153, 1595, 2088
XceI RCATGY 6 cut(s) 497, 581, 1341, 1722, 1786, 1802
XcmI CCANNNNNNNNNTGG 1 cut(s) 2381
XmiI GTMKAC 1 cut(s) 1422
XspI CTAG 4 cut(s) 744, 1071, 1167, 1830
Zsp2I ATGCAT 2 cut(s) 1005, 1720
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.