mitogen-activated protein kinase kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G18350 AT1G73500 AT3G06230 |
| fragaria_vesca | FvH4_5g02450 FvH4_5g02452 FvH4_5g02470 FvH4_5g17690 |
| malus_domestica | MD06G1232600.v1.1 MD13G1223400.v1.1 MD14G1239400.v1.1 MD16G1227900.v1.1 MD16G1228300.v1.1 |
| prunus_persica | Prupe.1G058300_v2.0.a1 Prupe.1G082800_v2.0.a1 Prupe.1G088400_v2.0.a1 Prupe.1G191900_v2.0.a1 Prupe.5G236900_v2.0.a1 |
| pyrus_communis | pycom13g19740 |
| rosa_chinensis | RchiOBHm_Chr5g0040641 RchiOBHm_Chr7g0177961 RchiOBHm_Chr7g0197661 |
| rosa_laevigata | RLG00000003920 RLG00000003933 RLG00000005487 RLG00000009687 |
| rosa_multiflora | Rmu_sc0002154.1_g000010 Rmu_sc0003916.1_g000020 Rmu_sc0006732.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00258300 Rroxscaffold_3G00258400 Rroxscaffold_5G00339620 Rroxscaffold_5G00339630 |
| rosa_rugosa | Rorug06G0411800 Rorug07G0040300 Rorug07G0042200 |
| rosa_samantha | Rh4CG058000 Rh5BG277200 Rh7AG010700 Rh7BG010700 Rh7BG168700 Rh7CG011100 Rh7CG175000 Rh7DG010800 Rh7DG168300 |
| rosa_wichuraiana | Rw5G025540 Rw7G000900 Rw7G014500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 4 cut(s) | 216, 389, 701, 1690 |
| AatII | GACGTC | 1 cut(s) | 1694 |
| AccB1I | GGYRCC | 2 cut(s) | 1654, 1808 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1517 |
| AccI | GTMKAC | 2 cut(s) | 318, 1121 |
| AccII | CGCG | 2 cut(s) | 411, 1465 |
| AclWI | GGATC | 3 cut(s) | 1061, 1238, 1269 |
| AcoI | YGGCCR | 3 cut(s) | 651, 1342, 1667 |
| AcuI | CTGAAG | 3 cut(s) | 1097, 1828, 1904 |
| AcvI | CACGTG | 1 cut(s) | 448 |
| AcyI | GRCGYC | 4 cut(s) | 702, 1655, 1691, 1781 |
| AfaI | GTAC | 4 cut(s) | 168, 291, 509, 1588 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 49, 433, 448, 1398, 1517, 1632, 1805, 1818, 1819 |
| AgsI | TTSAA | 2 cut(s) | 197, 1213 |
| AjnI | CCWGG | 1 cut(s) | 1921 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1296, 1328 |
| Alw21I | GWGCWC | 2 cut(s) | 1352, 1744 |
| Alw26I | GTCTC | 6 cut(s) | 480, 524, 608, 892, 1496, 1760 |
| AlwI | GGATC | 3 cut(s) | 1061, 1238, 1269 |
| Ama87I | CYCGRG | 1 cut(s) | 517 |
| ApaI | GGGCCC | 1 cut(s) | 1892 |
| ApeKI | GCWGC | 3 cut(s) | 1155, 1402, 1543 |
| AspLEI | GCGC | 5 cut(s) | 339, 926, 1298, 1548, 1657 |
| AspS9I | GGNCC | 9 cut(s) | 148, 271, 868, 1416, 1623, 1867, 1888, 1889, 1918 |
| AsuC2I | CCSGG | 4 cut(s) | 14, 773, 891, 1813 |
| AsuHPI | GGTGA | 3 cut(s) | 1083, 1416, 1672 |
| AvaI | CYCGRG | 1 cut(s) | 517 |
| AvaII | GGWCC | 4 cut(s) | 148, 271, 1867, 1918 |
| BaeGI | GKGCMC | 2 cut(s) | 1813, 1892 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 808, 841 |
| BalI | TGGCCA | 2 cut(s) | 1344, 1669 |
| BanI | GGYRCC | 2 cut(s) | 1654, 1808 |
| BanII | GRGCYC | 4 cut(s) | 773, 1352, 1471, 1892 |
| BauI | CACGAG | 1 cut(s) | 576 |
| BbrPI | CACGTG | 1 cut(s) | 448 |
| BbsI | GAAGAC | 1 cut(s) | 1834 |
| Bbv12I | GWGCWC | 2 cut(s) | 1352, 1744 |
| BbvCI | CCTCAGC | 2 cut(s) | 35, 1292 |
| BbvI | GCAGC | 3 cut(s) | 1142, 1389, 1555 |
| BccI | CCATC | 7 cut(s) | 473, 1330, 1337, 1438, 1574, 1633, 1690 |
| BceAI | ACGGC | 5 cut(s) | 199, 322, 565, 1044, 1722 |
| BciT130I | CCWGG | 1 cut(s) | 1923 |
| BciVI | GTATCC | 1 cut(s) | 809 |
| BcnI | CCSGG | 4 cut(s) | 14, 773, 891, 1813 |
| BcoDI | GTCTC | 6 cut(s) | 480, 524, 608, 892, 1496, 1760 |
| BfaI | CTAG | 7 cut(s) | 161, 170, 284, 293, 1101, 1263, 1805 |
| BfoI | RGCGCY | 3 cut(s) | 1299, 1549, 1658 |
| BfuI | GTATCC | 1 cut(s) | 809 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 107 |
| BglII | AGATCT | 1 cut(s) | 1435 |
| BlpI | GCTNAGC | 1 cut(s) | 1035 |
| BmcAI | AGTACT | 1 cut(s) | 1588 |
| Bme1390I | CCNGG | 5 cut(s) | 14, 773, 891, 1813, 1923 |
| Bme18I | GGWCC | 4 cut(s) | 148, 271, 1867, 1918 |
| BmeT110I | CYCGRG | 1 cut(s) | 517 |
| BmgT120I | GGNCC | 9 cut(s) | 148, 271, 868, 1416, 1623, 1867, 1888, 1889, 1918 |
| BmiI | GGNNCC | 9 cut(s) | 54, 942, 1418, 1656, 1810, 1868, 1890, 1919, 1920 |
| BmrFI | CCNGG | 5 cut(s) | 14, 773, 891, 1813, 1923 |
| BmrI | ACTGGG | 2 cut(s) | 916, 1599 |
| BmsI | GCATC | 3 cut(s) | 1098, 1469, 1695 |
| BmuI | ACTGGG | 2 cut(s) | 916, 1599 |
| BpiI | GAAGAC | 1 cut(s) | 1834 |
| BpmI | CTGGAG | 2 cut(s) | 363, 1944 |
| Bpu10I | CCTNAGC | 2 cut(s) | 35, 1292 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1035 |
| BpuEI | CTTGAG | 1 cut(s) | 1478 |
| BpuMI | CCSGG | 4 cut(s) | 14, 773, 891, 1813 |
| BsaAI | YACGTR | 1 cut(s) | 448 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1248 |
| BsaHI | GRCGYC | 4 cut(s) | 702, 1655, 1691, 1781 |
| BsaI | GGTCTC | 3 cut(s) | 524, 608, 892 |
| BsaJI | CCNNGG | 7 cut(s) | 144, 175, 267, 298, 561, 567, 1921 |
| BsaWI | WCCGGW | 1 cut(s) | 482 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 49, 433, 448, 1398, 1517, 1632, 1805, 1818, 1819 |
| Bse118I | RCCGGY | 3 cut(s) | 649, 946, 1657 |
| Bse1I | ACTGG | 5 cut(s) | 346, 822, 911, 1233, 1594 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1248 |
| BseBI | CCWGG | 1 cut(s) | 1923 |
| BseDI | CCNNGG | 7 cut(s) | 144, 175, 267, 298, 561, 567, 1921 |
| BseGI | GGATG | 5 cut(s) | 9, 630, 1203, 1644, 1710 |
| BseJI | GATNNNNATC | 1 cut(s) | 1248 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 49, 433, 448, 1398, 1517, 1632, 1805, 1818, 1819 |
| BseMII | CTCAG | 5 cut(s) | 49, 635, 1049, 1306, 1455 |
| BseNI | ACTGG | 5 cut(s) | 346, 822, 911, 1233, 1594 |
| BseRI | GAGGAG | 5 cut(s) | 118, 241, 986, 1307, 1585 |
| BseSI | GKGCMC | 2 cut(s) | 1813, 1892 |
| BseXI | GCAGC | 3 cut(s) | 1142, 1389, 1555 |
| BseYI | CCCAGC | 1 cut(s) | 1774 |
| Bsh1236I | CGCG | 2 cut(s) | 411, 1465 |
| BshNI | GGYRCC | 2 cut(s) | 1654, 1808 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1352, 1744 |
| BsiHKCI | CYCGRG | 1 cut(s) | 517 |
| BslFI | GGGAC | 2 cut(s) | 766, 1931 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 49, 433, 448, 1398, 1517, 1632, 1805, 1818, 1819 |
| BsmAI | GTCTC | 6 cut(s) | 480, 524, 608, 892, 1496, 1760 |
| BsmBI | CGTCTC | 1 cut(s) | 1760 |
| BsmFI | GGGAC | 2 cut(s) | 766, 1931 |
| Bso31I | GGTCTC | 3 cut(s) | 524, 608, 892 |
| BsoBI | CYCGRG | 1 cut(s) | 517 |
| Bsp120I | GGGCCC | 1 cut(s) | 1888 |
| Bsp1286I | GDGCHC | 6 cut(s) | 773, 1352, 1471, 1744, 1813, 1892 |
| Bsp143I | GATC | 7 cut(s) | 627, 1066, 1243, 1274, 1435, 1451, 1536 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1035 |
| BspCNI | CTCAG | 5 cut(s) | 48, 634, 1048, 1305, 1454 |
| BspFNI | CGCG | 2 cut(s) | 411, 1465 |
| BspLI | GGNNCC | 9 cut(s) | 54, 942, 1418, 1656, 1810, 1868, 1890, 1919, 1920 |
| BspPI | GGATC | 3 cut(s) | 1061, 1238, 1269 |
| BspT107I | GGYRCC | 2 cut(s) | 1654, 1808 |
| BspTNI | GGTCTC | 3 cut(s) | 524, 608, 892 |
| BsrFI | RCCGGY | 3 cut(s) | 649, 946, 1657 |
| BsrI | ACTGG | 5 cut(s) | 346, 822, 911, 1233, 1594 |
| BssAI | RCCGGY | 3 cut(s) | 649, 946, 1657 |
| BssECI | CCNNGG | 7 cut(s) | 144, 175, 267, 298, 561, 567, 1921 |
| BssMI | GATC | 7 cut(s) | 627, 1066, 1243, 1274, 1435, 1451, 1536 |
| BssNI | GRCGYC | 4 cut(s) | 702, 1655, 1691, 1781 |
| BssSI | CACGAG | 1 cut(s) | 576 |
| BssT1I | CCWWGG | 1 cut(s) | 567 |
| Bst2BI | CACGAG | 1 cut(s) | 576 |
| Bst2UI | CCWGG | 1 cut(s) | 1923 |
| Bst6I | CTCTTC | 1 cut(s) | 1013 |
| BstACI | GRCGYC | 4 cut(s) | 702, 1655, 1691, 1781 |
| BstBAI | YACGTR | 1 cut(s) | 448 |
| BstC8I | GCNNGC | 8 cut(s) | 26, 401, 651, 1001, 1407, 1467, 1650, 1671 |
| BstDEI | CTNAG | 5 cut(s) | 35, 621, 1035, 1292, 1441 |
| BstDSI | CCRYGG | 2 cut(s) | 175, 298 |
| BstF5I | GGATG | 5 cut(s) | 9, 630, 1203, 1644, 1710 |
| BstFNI | CGCG | 2 cut(s) | 411, 1465 |
| BstH2I | RGCGCY | 3 cut(s) | 1299, 1549, 1658 |
| BstHHI | GCGC | 5 cut(s) | 339, 926, 1298, 1548, 1657 |
| BstKTI | GATC | 7 cut(s) | 630, 1069, 1246, 1277, 1438, 1454, 1539 |
| BstMAI | GTCTC | 6 cut(s) | 480, 524, 608, 892, 1496, 1760 |
| BstMBI | GATC | 7 cut(s) | 627, 1066, 1243, 1274, 1435, 1451, 1536 |
| BstNI | CCWGG | 1 cut(s) | 1923 |
| BstSCI | CCNGG | 5 cut(s) | 12, 771, 889, 1811, 1921 |
| BstSLI | GKGCMC | 2 cut(s) | 1813, 1892 |
| BstUI | CGCG | 2 cut(s) | 411, 1465 |
| BstV1I | GCAGC | 3 cut(s) | 1142, 1389, 1555 |
| BstV2I | GAAGAC | 1 cut(s) | 1834 |
| BstX2I | RGATCY | 4 cut(s) | 1066, 1243, 1274, 1435 |
| BstYI | RGATCY | 4 cut(s) | 1066, 1243, 1274, 1435 |
| BsuI | GTATCC | 1 cut(s) | 809 |
| BtgI | CCRYGG | 2 cut(s) | 175, 298 |
| BtgZI | GCGATG | 1 cut(s) | 1446 |
| BtsCI | GGATG | 5 cut(s) | 9, 630, 1203, 1644, 1710 |
| BtsI | GCAGTG | 1 cut(s) | 454 |
| BtsIMutI | CAGTG | 4 cut(s) | 339, 454, 829, 1488 |
| Cac8I | GCNNGC | 8 cut(s) | 26, 401, 651, 1001, 1407, 1467, 1650, 1671 |
| CfoI | GCGC | 5 cut(s) | 339, 926, 1298, 1548, 1657 |
| Cfr10I | RCCGGY | 3 cut(s) | 649, 946, 1657 |
| Cfr13I | GGNCC | 9 cut(s) | 148, 271, 868, 1416, 1623, 1867, 1888, 1889, 1918 |
| CseI | GACGC | 4 cut(s) | 53, 691, 1054, 1770 |
| Csp6I | GTAC | 4 cut(s) | 167, 290, 508, 1587 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 933, 968 |
| CviAII | CATG | 8 cut(s) | 502, 511, 676, 766, 853, 865, 1517, 1937 |
| CviQI | GTAC | 4 cut(s) | 167, 290, 508, 1587 |
| DdeI | CTNAG | 5 cut(s) | 35, 621, 1035, 1292, 1441 |
| DinI | GGCGCC | 1 cut(s) | 1656 |
| DpnI | GATC | 7 cut(s) | 629, 1068, 1245, 1276, 1437, 1453, 1538 |
| DpnII | GATC | 7 cut(s) | 627, 1066, 1243, 1274, 1435, 1451, 1536 |
| DrdI | GACNNNNNNGTC | 4 cut(s) | 216, 389, 701, 1690 |
| DseDI | GACNNNNNNGTC | 4 cut(s) | 216, 389, 701, 1690 |
| EaeI | YGGCCR | 3 cut(s) | 651, 1342, 1667 |
| Eam1104I | CTCTTC | 1 cut(s) | 1013 |
| EarI | CTCTTC | 1 cut(s) | 1013 |
| EciI | GGCGGA | 8 cut(s) | 121, 130, 210, 244, 253, 317, 383, 416 |
| Ecl136II | GAGCTC | 1 cut(s) | 1350 |
| Eco130I | CCWWGG | 1 cut(s) | 567 |
| Eco147I | AGGCCT | 1 cut(s) | 1391 |
| Eco24I | GRGCYC | 4 cut(s) | 773, 1352, 1471, 1892 |
| Eco31I | GGTCTC | 3 cut(s) | 524, 608, 892 |
| Eco47I | GGWCC | 4 cut(s) | 148, 271, 1867, 1918 |
| Eco53kI | GAGCTC | 1 cut(s) | 1350 |
| Eco57I | CTGAAG | 3 cut(s) | 1097, 1828, 1904 |
| Eco72I | CACGTG | 1 cut(s) | 448 |
| Eco88I | CYCGRG | 1 cut(s) | 517 |
| EcoICRI | GAGCTC | 1 cut(s) | 1350 |
| EcoO109I | RGGNCCY | 4 cut(s) | 1416, 1888, 1889, 1918 |
| EcoRII | CCWGG | 1 cut(s) | 1921 |
| EcoT14I | CCWWGG | 1 cut(s) | 567 |
| EcoT38I | GRGCYC | 4 cut(s) | 773, 1352, 1471, 1892 |
| EgeI | GGCGCC | 1 cut(s) | 1656 |
| EheI | GGCGCC | 1 cut(s) | 1656 |
| ErhI | CCWWGG | 1 cut(s) | 567 |
| Esp3I | CGTCTC | 1 cut(s) | 1760 |
| FaeI | CATG | 8 cut(s) | 505, 514, 679, 769, 856, 868, 1520, 1940 |
| FaqI | GGGAC | 2 cut(s) | 766, 1931 |
| FatI | CATG | 8 cut(s) | 501, 510, 675, 765, 852, 864, 1516, 1936 |
| FauI | CCCGC | 1 cut(s) | 1458 |
| FblI | GTMKAC | 2 cut(s) | 318, 1121 |
| FokI | GGATG | 4 cut(s) | 617, 1190, 1651, 1717 |
| FriOI | GRGCYC | 4 cut(s) | 773, 1352, 1471, 1892 |
| FspBI | CTAG | 7 cut(s) | 161, 170, 284, 293, 1101, 1263, 1805 |
| GlaI | GCGC | 5 cut(s) | 338, 925, 1297, 1547, 1656 |
| GsaI | CCCAGC | 1 cut(s) | 1778 |
| GsuI | CTGGAG | 2 cut(s) | 363, 1944 |
| HaeII | RGCGCY | 3 cut(s) | 1299, 1549, 1658 |
| HgaI | GACGC | 4 cut(s) | 53, 691, 1054, 1770 |
| HhaI | GCGC | 5 cut(s) | 339, 926, 1298, 1548, 1657 |
| Hin1I | GRCGYC | 4 cut(s) | 702, 1655, 1691, 1781 |
| Hin1II | CATG | 8 cut(s) | 505, 514, 679, 769, 856, 868, 1520, 1940 |
| Hin6I | GCGC | 5 cut(s) | 337, 924, 1296, 1546, 1655 |
| HinP1I | GCGC | 5 cut(s) | 337, 924, 1296, 1546, 1655 |
| HincII | GTYRAC | 3 cut(s) | 667, 1122, 1479 |
| HindII | GTYRAC | 3 cut(s) | 667, 1122, 1479 |
| HinfI | GANTC | 8 cut(s) | 204, 377, 437, 496, 515, 1010, 1445, 1713 |
| HphI | GGTGA | 3 cut(s) | 1083, 1416, 1672 |
| Hpy166II | GTNNAC | 7 cut(s) | 319, 454, 667, 1026, 1122, 1479, 1870 |
| Hpy8I | GTNNAC | 7 cut(s) | 319, 454, 667, 1026, 1122, 1479, 1870 |
| Hpy99I | CGWCG | 7 cut(s) | 69, 1123, 1165, 1337, 1693, 1696, 1797 |
| HpyAV | CCTTC | 7 cut(s) | 145, 268, 1229, 1321, 1431, 1563, 1879 |
| HpyCH4IV | ACGT | 6 cut(s) | 73, 447, 554, 747, 1691, 1756 |
| HpyCH4V | TGCA | 6 cut(s) | 459, 1003, 1271, 1409, 1609, 1936 |
| HpyF3I | CTNAG | 5 cut(s) | 35, 621, 1035, 1292, 1441 |
| HpySE526I | ACGT | 6 cut(s) | 73, 447, 554, 747, 1691, 1756 |
| Hsp92I | GRCGYC | 4 cut(s) | 702, 1655, 1691, 1781 |
| Hsp92II | CATG | 8 cut(s) | 505, 514, 679, 769, 856, 868, 1520, 1940 |
| HspAI | GCGC | 5 cut(s) | 337, 924, 1296, 1546, 1655 |
| KasI | GGCGCC | 1 cut(s) | 1654 |
| KflI | GGGWCCC | 1 cut(s) | 1918 |
| KroI | GCCGGC | 1 cut(s) | 649 |
| KroNI | GCCGGC | 1 cut(s) | 651 |
| Kzo9I | GATC | 7 cut(s) | 627, 1066, 1243, 1274, 1435, 1451, 1536 |
| LmnI | GCTCC | 7 cut(s) | 131, 254, 344, 834, 856, 940, 1572 |
| Lsp1109I | GCAGC | 3 cut(s) | 1142, 1389, 1555 |
| LweI | GCATC | 3 cut(s) | 1098, 1469, 1695 |
| MaeI | CTAG | 7 cut(s) | 161, 170, 284, 293, 1101, 1263, 1805 |
| MaeII | ACGT | 6 cut(s) | 73, 447, 554, 747, 1691, 1756 |
| MaeIII | GTNAC | 7 cut(s) | 179, 302, 638, 737, 1175, 1235, 1370 |
| MalI | GATC | 7 cut(s) | 629, 1068, 1245, 1276, 1437, 1453, 1538 |
| MboI | GATC | 7 cut(s) | 627, 1066, 1243, 1274, 1435, 1451, 1536 |
| MboII | GAAGA | 4 cut(s) | 637, 1030, 1446, 1834 |
| MflI | RGATCY | 4 cut(s) | 1066, 1243, 1274, 1435 |
| MhlI | GDGCHC | 6 cut(s) | 773, 1352, 1471, 1744, 1813, 1892 |
| MlsI | TGGCCA | 2 cut(s) | 1344, 1669 |
| MluCI | AATT | 2 cut(s) | 607, 1087 |
| MluNI | TGGCCA | 2 cut(s) | 1344, 1669 |
| Mly113I | GGCGCC | 1 cut(s) | 1655 |
| MlyI | GAGTC | 5 cut(s) | 198, 371, 431, 509, 1019 |
| MmeI | TCCRAC | 4 cut(s) | 232, 405, 948, 1170 |
| Mox20I | TGGCCA | 2 cut(s) | 1344, 1669 |
| MroNI | GCCGGC | 1 cut(s) | 649 |
| MscI | TGGCCA | 2 cut(s) | 1344, 1669 |
| MseI | TTAA | 1 cut(s) | 1718 |
| Msp20I | TGGCCA | 2 cut(s) | 1344, 1669 |
| MspA1I | CMGCKG | 1 cut(s) | 104 |
| MspR9I | CCNGG | 5 cut(s) | 14, 773, 891, 1813, 1923 |
| MvaI | CCWGG | 1 cut(s) | 1923 |
| MvnI | CGCG | 2 cut(s) | 411, 1465 |
| NaeI | GCCGGC | 1 cut(s) | 651 |
| NarI | GGCGCC | 1 cut(s) | 1655 |
| NciI | CCSGG | 4 cut(s) | 14, 773, 891, 1813 |
| NdeII | GATC | 7 cut(s) | 627, 1066, 1243, 1274, 1435, 1451, 1536 |
| NgoMIV | GCCGGC | 1 cut(s) | 649 |
| NlaIII | CATG | 8 cut(s) | 505, 514, 679, 769, 856, 868, 1520, 1940 |
| NlaIV | GGNNCC | 9 cut(s) | 54, 942, 1418, 1656, 1810, 1868, 1890, 1919, 1920 |
| NmuCI | GTSAC | 3 cut(s) | 638, 1175, 1370 |
| PceI | AGGCCT | 1 cut(s) | 1391 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 468, 583 |
| PdiI | GCCGGC | 1 cut(s) | 651 |
| PfeI | GAWTC | 3 cut(s) | 496, 1445, 1713 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1517 |
| PfoI | TCCNGGA | 1 cut(s) | 12 |
| PleI | GAGTC | 5 cut(s) | 198, 371, 431, 509, 1018 |
| PluTI | GGCGCC | 1 cut(s) | 1658 |
| PmaCI | CACGTG | 1 cut(s) | 448 |
| PmlI | CACGTG | 1 cut(s) | 448 |
| PpsI | GAGTC | 5 cut(s) | 198, 371, 431, 509, 1018 |
| Ppu21I | YACGTR | 1 cut(s) | 448 |
| PpuMI | RGGWCCY | 1 cut(s) | 1918 |
| Psp124BI | GAGCTC | 1 cut(s) | 1352 |
| Psp5II | RGGWCCY | 1 cut(s) | 1918 |
| Psp6I | CCWGG | 1 cut(s) | 1921 |
| PspCI | CACGTG | 1 cut(s) | 448 |
| PspFI | CCCAGC | 1 cut(s) | 1774 |
| PspGI | CCWGG | 1 cut(s) | 1921 |
| PspN4I | GGNNCC | 9 cut(s) | 54, 942, 1418, 1656, 1810, 1868, 1890, 1919, 1920 |
| PspOMI | GGGCCC | 1 cut(s) | 1888 |
| PspPI | GGNCC | 9 cut(s) | 148, 271, 868, 1416, 1623, 1867, 1888, 1889, 1918 |
| PspPPI | RGGWCCY | 1 cut(s) | 1918 |
| PsuI | RGATCY | 4 cut(s) | 1066, 1243, 1274, 1435 |
| RsaI | GTAC | 4 cut(s) | 168, 291, 509, 1588 |
| RsaNI | GTAC | 4 cut(s) | 167, 290, 508, 1587 |
| SacI | GAGCTC | 1 cut(s) | 1352 |
| SalI | GTCGAC | 1 cut(s) | 1120 |
| SaqAI | TTAA | 1 cut(s) | 1718 |
| Sau3AI | GATC | 7 cut(s) | 627, 1066, 1243, 1274, 1435, 1451, 1536 |
| Sau96I | GGNCC | 9 cut(s) | 148, 271, 868, 1416, 1623, 1867, 1888, 1889, 1918 |
| ScaI | AGTACT | 1 cut(s) | 1588 |
| SchI | GAGTC | 5 cut(s) | 198, 371, 431, 509, 1019 |
| ScrFI | CCNGG | 5 cut(s) | 14, 773, 891, 1813, 1923 |
| SduI | GDGCHC | 6 cut(s) | 773, 1352, 1471, 1744, 1813, 1892 |
| SfaNI | GCATC | 3 cut(s) | 1098, 1469, 1695 |
| SfoI | GGCGCC | 1 cut(s) | 1656 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1657 |
| SinI | GGWCC | 4 cut(s) | 148, 271, 1867, 1918 |
| SmlI | CTYRAG | 1 cut(s) | 1493 |
| SmoI | CTYRAG | 1 cut(s) | 1493 |
| Sse9I | AATT | 2 cut(s) | 607, 1087 |
| SseBI | AGGCCT | 1 cut(s) | 1391 |
| SspDI | GGCGCC | 1 cut(s) | 1654 |
| SspMI | CTAG | 7 cut(s) | 161, 170, 284, 293, 1101, 1263, 1805 |
| SstI | GAGCTC | 1 cut(s) | 1352 |
| StuI | AGGCCT | 1 cut(s) | 1391 |
| StyD4I | CCNGG | 5 cut(s) | 12, 771, 889, 1811, 1921 |
| StyI | CCWWGG | 1 cut(s) | 567 |
| TaiI | ACGT | 6 cut(s) | 76, 450, 557, 750, 1694, 1759 |
| TasI | AATT | 2 cut(s) | 607, 1087 |
| TatI | WGTACW | 2 cut(s) | 507, 1586 |
| TfiI | GAWTC | 3 cut(s) | 496, 1445, 1713 |
| Tru1I | TTAA | 1 cut(s) | 1718 |
| Tru9I | TTAA | 1 cut(s) | 1718 |
| TscAI | CASTG | 4 cut(s) | 346, 461, 829, 1488 |
| TseFI | GTSAC | 3 cut(s) | 638, 1175, 1370 |
| TseI | GCWGC | 3 cut(s) | 1155, 1402, 1543 |
| Tsp45I | GTSAC | 3 cut(s) | 638, 1175, 1370 |
| TspGWI | ACGGA | 2 cut(s) | 449, 867 |
| TspRI | CASTG | 4 cut(s) | 346, 461, 829, 1488 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1517 |
| VpaK11BI | GGWCC | 4 cut(s) | 148, 271, 1867, 1918 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 103, 338 |
| XmiI | GTMKAC | 2 cut(s) | 318, 1121 |
| XspI | CTAG | 7 cut(s) | 161, 170, 284, 293, 1101, 1263, 1805 |
| ZraI | GACGTC | 1 cut(s) | 1692 |
| ZrmI | AGTACT | 1 cut(s) | 1588 |