Rh7CG011100

mitogen-activated protein kinase kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0001823
Physical Location & Seq
Forward (+)
831903 .. 833448
1546 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG011100.1

Sequence Viewer

Length: 975 bp
ATGGCTCTCATCCGGGAACGCCGCCAGCTCAACCTTAGCCTCCCCTTGCCGGAACCCTCCGAGCGTCGCCCACGTTTCACTCTACCTCTCCCTCCCACCGCCGCCGTGGCAACCACCACCAACTGCTCCTCCGCCGCCGCCGCCTCGGACCTCGAAAGACTAGAGGTACTAGGCCACGGTAACGGCGGCACAGTCTACAAAGTCCGCCACAAGCGCACTGGAGCTAACTACGCCCTAAAAATAGTGAAAGGCGACTCCGACCCCACTGTCCGCCGCCAGCTCTACCGCGAAATAGAAATCCTCCGCCGCACGGACTCCCCCCACGTGGTTCACTGCAACGCCATCATCGAGAAGCCCACCGGAGACATCTGGATTCTCATGGAGTACATGGACTCGGGAACATTAGAGACCTCGCTCAAAGAAAACTGCACGTTCTCCGAGGCCAAGGTCGCTCGTGTAGCTCGTCAAGTCCTCAACGGTCTCAATTACCTCCACACTCAGAAGATCATCCACCGTGACATCAAGCCAGCCAATCTGTTAGTCAACAGCAACATGGAAGTCAAGATTGCCGACTTCGGCGTCAGCAAAATGATGTGCCGAACTCTCGATAACTGTAACTCATACGTTGGGACTTGTGCTTACATGAGCCCGGAGAGATTTGACCCTGACACTTACGGTGGAAACTACAATGGGTACGCCAGTGATATATGGAGCTTGGGTCTAACCCTCATGGAGCTTTACATGGGCCACTTTCCGTTCTTGCCTCCGGGTCAGAGACCCGACTGGGCGACCCTTATGTGCGCCATATGTTTCGGGGAGCCACCGGCCTTGCCGGAGGGGGTGTCGGAGGAGTTCAGGAGTTTTATGGAGTGTTGCTTGCAAAAGGAGTCGGGGAAGAGGTGGACGGCGGCTCAGCTTTTGACGCACCCGTTTGTTTGTAAAGATCCGAAAGCCATTCGGTACCTGAAGGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000160 GO:0000165 GO:0000187 GO:0001101 GO:0001932 GO:0001934 GO:0002229 GO:0002239 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004708 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006464 GO:0006468 GO:0006725 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006950 GO:0006952 GO:0006955 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0007568 GO:0008047 GO:0008150 GO:0008152 GO:0009058 GO:0009403 GO:0009404 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009627 GO:0009628 GO:0009651 GO:0009692 GO:0009693 GO:0009700 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0009755 GO:0009791 GO:0009814 GO:0009838 GO:0009862 GO:0009863 GO:0009873 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0009914 GO:0009926 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010120 GO:0010150 GO:0010227 GO:0010229 GO:0010468 GO:0010556 GO:0010557 GO:0010562 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0010817 GO:0014070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018130 GO:0019207 GO:0019209 GO:0019219 GO:0019220 GO:0019222 GO:0019438 GO:0019538 GO:0019748 GO:0019887 GO:0022414 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0030234 GO:0030295 GO:0031098 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033674 GO:0034641 GO:0035556 GO:0035690 GO:0036211 GO:0042221 GO:0042325 GO:0042327 GO:0042430 GO:0042435 GO:0042445 GO:0042446 GO:0042493 GO:0042742 GO:0043085 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043449 GO:0043450 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044272 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0045087 GO:0045859 GO:0045860 GO:0045893 GO:0045935 GO:0045937 GO:0046217 GO:0046483 GO:0046677 GO:0046777 GO:0048366 GO:0048367 GO:0048437 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051338 GO:0051347 GO:0051704 GO:0051707 GO:0051716 GO:0051726 GO:0052314 GO:0052315 GO:0052317 GO:0060255 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0065009 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071369 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0071900 GO:0071902 GO:0080090 GO:0090567 GO:0090693 GO:0098542 GO:0098772 GO:0099402 GO:0140096 GO:1900673 GO:1900674 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902533 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04016 map04016
Pfam Domains
Protein Families
Pkinase

Protein Analysis

324

Amino Acids

36.43

Weight (kDa)

8.24

Isoelectric Point (pI)

52.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 52 - 312 9e-67 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 52 - 307 9.2e-41 Protein tyrosine and serine/threonine kinase
ABC1 PF03109 114 - 198 2.7e-06 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 266, 578
Acc65I GGTACC 1 cut(s) 960
AccB1I GGYRCC 1 cut(s) 960
AccI GTMKAC 1 cut(s) 195
AccII CGCG 1 cut(s) 288
AclWI GGATC 1 cut(s) 938
AcvI CACGTG 1 cut(s) 325
AcyI GRCGYC 1 cut(s) 579
AfaI GTAC 4 cut(s) 168, 386, 695, 962
AfiI CCNNNNNNNGG 3 cut(s) 49, 310, 325
AluBI AGCT 7 cut(s) 28, 224, 280, 461, 714, 736, 916
AluI AGCT 7 cut(s) 28, 224, 280, 461, 714, 736, 916
Alw26I GTCTC 4 cut(s) 357, 401, 485, 769
AlwI GGATC 1 cut(s) 938
Ama87I CYCGRG 1 cut(s) 394
AoxI GGCC 4 cut(s) 172, 441, 745, 825
Asp718I GGTACC 1 cut(s) 960
AspLEI GCGC 2 cut(s) 216, 803
AspS9I GGNCC 2 cut(s) 148, 745
AsuC2I CCSGG 3 cut(s) 14, 650, 768
AvaI CYCGRG 1 cut(s) 394
AvaII GGWCC 1 cut(s) 148
BaeI ACNNNNGTAYC 2 cut(s) 685, 718
BanI GGYRCC 1 cut(s) 960
BanII GRGCYC 1 cut(s) 650
BauI CACGAG 1 cut(s) 453
BbrPI CACGTG 1 cut(s) 325
BccI CCATC 1 cut(s) 350
BceAI ACGGC 3 cut(s) 89, 199, 921
BcnI CCSGG 3 cut(s) 14, 650, 768
BcoDI GTCTC 4 cut(s) 357, 401, 485, 769
BfaI CTAG 2 cut(s) 161, 170
BglI GCCNNNNNGGC 1 cut(s) 107
BisI GCNGC 9 cut(s) 22, 102, 135, 138, 141, 187, 274, 307, 909
BlpI GCTNAGC 1 cut(s) 912
BlsI GCNGC 9 cut(s) 23, 103, 136, 139, 142, 188, 275, 308, 910
Bme1390I CCNGG 3 cut(s) 14, 650, 768
Bme18I GGWCC 1 cut(s) 148
BmeT110I CYCGRG 1 cut(s) 394
BmgT120I GGNCC 2 cut(s) 148, 745
BmiI GGNNCC 3 cut(s) 54, 819, 962
BmrFI CCNGG 3 cut(s) 14, 650, 768
BmrI ACTGGG 1 cut(s) 793
BmuI ACTGGG 1 cut(s) 793
BpmI CTGGAG 1 cut(s) 240
Bpu10I CCTNAGC 1 cut(s) 35
Bpu1102I GCTNAGC 1 cut(s) 912
BpuMI CCSGG 3 cut(s) 14, 650, 768
BsaAI YACGTR 1 cut(s) 325
BsaHI GRCGYC 1 cut(s) 579
BsaI GGTCTC 3 cut(s) 401, 485, 769
BsaJI CCNNGG 5 cut(s) 105, 144, 175, 438, 444
BsaWI WCCGGW 1 cut(s) 359
BsaXI ACNNNNNCTCC 6 cut(s) 113, 143, 703, 733, 827, 857
Bsc4I CCNNNNNNNGG 3 cut(s) 49, 310, 325
Bse118I RCCGGY 1 cut(s) 823
Bse1I ACTGG 3 cut(s) 223, 699, 788
BseDI CCNNGG 5 cut(s) 105, 144, 175, 438, 444
BseGI GGATG 2 cut(s) 9, 507
BseLI CCNNNNNNNGG 3 cut(s) 49, 310, 325
BseMII CTCAG 2 cut(s) 512, 926
BseNI ACTGG 3 cut(s) 223, 699, 788
BseRI GAGGAG 2 cut(s) 118, 863
BsgI GTGCAG 1 cut(s) 412
Bsh1236I CGCG 1 cut(s) 288
BshFI GGCC 4 cut(s) 174, 443, 747, 827
BshNI GGYRCC 1 cut(s) 960
BsiHKCI CYCGRG 1 cut(s) 394
BsiSI CCGG 7 cut(s) 13, 50, 360, 650, 767, 824, 833
BslFI GGGAC 1 cut(s) 643
BslI CCNNNNNNNGG 3 cut(s) 49, 310, 325
BsmAI GTCTC 4 cut(s) 357, 401, 485, 769
BsmFI GGGAC 1 cut(s) 643
BsnI GGCC 4 cut(s) 174, 443, 747, 827
Bso31I GGTCTC 3 cut(s) 401, 485, 769
BsoBI CYCGRG 1 cut(s) 394
Bsp1286I GDGCHC 1 cut(s) 650
Bsp143I GATC 2 cut(s) 504, 943
Bsp1720I GCTNAGC 1 cut(s) 912
BspANI GGCC 4 cut(s) 174, 443, 747, 827
BspCNI CTCAG 2 cut(s) 511, 925
BspFNI CGCG 1 cut(s) 288
BspLI GGNNCC 3 cut(s) 54, 819, 962
BspPI GGATC 1 cut(s) 938
BspT107I GGYRCC 1 cut(s) 960
BspTNI GGTCTC 3 cut(s) 401, 485, 769
BsrFI RCCGGY 1 cut(s) 823
BsrI ACTGG 3 cut(s) 223, 699, 788
BssAI RCCGGY 1 cut(s) 823
BssECI CCNNGG 5 cut(s) 105, 144, 175, 438, 444
BssMI GATC 2 cut(s) 504, 943
BssNI GRCGYC 1 cut(s) 579
BssSI CACGAG 1 cut(s) 453
BssT1I CCWWGG 1 cut(s) 444
Bst2BI CACGAG 1 cut(s) 453
Bst4CI ACNGT 7 cut(s) 179, 193, 268, 479, 515, 614, 677
Bst6I CTCTTC 1 cut(s) 890
BstACI GRCGYC 1 cut(s) 579
BstBAI YACGTR 1 cut(s) 325
BstC8I GCNNGC 4 cut(s) 26, 278, 528, 878
BstDEI CTNAG 3 cut(s) 35, 498, 912
BstDSI CCRYGG 2 cut(s) 105, 175
BstF5I GGATG 2 cut(s) 9, 507
BstFNI CGCG 1 cut(s) 288
BstHHI GCGC 2 cut(s) 216, 803
BstKTI GATC 2 cut(s) 507, 946
BstMAI GTCTC 4 cut(s) 357, 401, 485, 769
BstMBI GATC 2 cut(s) 504, 943
BstMWI GCNNNNNNNGC 7 cut(s) 107, 140, 213, 230, 449, 458, 922
BstSCI CCNGG 3 cut(s) 12, 648, 766
BstUI CGCG 1 cut(s) 288
BstX2I RGATCY 1 cut(s) 943
BstYI RGATCY 1 cut(s) 943
BsuRI GGCC 4 cut(s) 174, 443, 747, 827
BtgI CCRYGG 2 cut(s) 105, 175
BtsCI GGATG 2 cut(s) 9, 507
BtsI GCAGTG 1 cut(s) 331
BtsIMutI CAGTG 4 cut(s) 216, 264, 331, 706
Cac8I GCNNGC 4 cut(s) 26, 278, 528, 878
CfoI GCGC 2 cut(s) 216, 803
Cfr10I RCCGGY 1 cut(s) 823
Cfr13I GGNCC 2 cut(s) 148, 745
CseI GACGC 3 cut(s) 53, 568, 931
Csp6I GTAC 4 cut(s) 167, 385, 694, 961
CspCI CAANNNNNGTGG 2 cut(s) 810, 845
CviAII CATG 6 cut(s) 379, 388, 553, 643, 730, 742
CviQI GTAC 4 cut(s) 167, 385, 694, 961
DdeI CTNAG 3 cut(s) 35, 498, 912
DpnI GATC 2 cut(s) 506, 945
DpnII GATC 2 cut(s) 504, 943
DrdI GACNNNNNNGTC 2 cut(s) 266, 578
DseDI GACNNNNNNGTC 2 cut(s) 266, 578
Eam1104I CTCTTC 1 cut(s) 890
EarI CTCTTC 1 cut(s) 890
EciI GGCGGA 4 cut(s) 121, 194, 260, 293
Eco130I CCWWGG 1 cut(s) 444
Eco24I GRGCYC 1 cut(s) 650
Eco31I GGTCTC 3 cut(s) 401, 485, 769
Eco47I GGWCC 1 cut(s) 148
Eco72I CACGTG 1 cut(s) 325
Eco88I CYCGRG 1 cut(s) 394
EcoT14I CCWWGG 1 cut(s) 444
EcoT38I GRGCYC 1 cut(s) 650
ErhI CCWWGG 1 cut(s) 444
FaeI CATG 6 cut(s) 382, 391, 556, 646, 733, 745
FaqI GGGAC 1 cut(s) 643
FatI CATG 6 cut(s) 378, 387, 552, 642, 729, 741
FauNDI CATATG 1 cut(s) 806
FblI GTMKAC 1 cut(s) 195
Fnu4HI GCNGC 9 cut(s) 22, 102, 135, 138, 141, 187, 274, 307, 909
FokI GGATG 1 cut(s) 494
FriOI GRGCYC 1 cut(s) 650
Fsp4HI GCNGC 9 cut(s) 22, 102, 135, 138, 141, 187, 274, 307, 909
FspBI CTAG 2 cut(s) 161, 170
GlaI GCGC 2 cut(s) 215, 802
GluI GCNGC 9 cut(s) 22, 102, 135, 138, 141, 187, 274, 307, 909
GsuI CTGGAG 1 cut(s) 240
HaeIII GGCC 4 cut(s) 174, 443, 747, 827
HapII CCGG 7 cut(s) 13, 50, 360, 650, 767, 824, 833
HgaI GACGC 3 cut(s) 53, 568, 931
HhaI GCGC 2 cut(s) 216, 803
Hin1I GRCGYC 1 cut(s) 579
Hin1II CATG 6 cut(s) 382, 391, 556, 646, 733, 745
Hin6I GCGC 2 cut(s) 214, 801
HinP1I GCGC 2 cut(s) 214, 801
HincII GTYRAC 1 cut(s) 544
HindII GTYRAC 1 cut(s) 544
HinfI GANTC 5 cut(s) 254, 314, 373, 392, 887
HpaII CCGG 7 cut(s) 13, 50, 360, 650, 767, 824, 833
Hpy166II GTNNAC 4 cut(s) 196, 331, 544, 903
Hpy188I TCNGA 8 cut(s) 61, 148, 259, 439, 501, 774, 847, 948
Hpy188III TCNNGA 6 cut(s) 349, 370, 396, 562, 605, 856
Hpy8I GTNNAC 4 cut(s) 196, 331, 544, 903
Hpy99I CGWCG 1 cut(s) 69
HpyAV CCTTC 1 cut(s) 961
HpyCH4III ACNGT 7 cut(s) 179, 193, 268, 479, 515, 614, 677
HpyCH4IV ACGT 4 cut(s) 73, 324, 431, 624
HpyCH4V TGCA 3 cut(s) 336, 429, 880
HpyF10VI GCNNNNNNNGC 7 cut(s) 107, 140, 213, 230, 449, 458, 922
HpyF3I CTNAG 3 cut(s) 35, 498, 912
HpySE526I ACGT 4 cut(s) 73, 324, 431, 624
Hsp92I GRCGYC 1 cut(s) 579
Hsp92II CATG 6 cut(s) 382, 391, 556, 646, 733, 745
HspAI GCGC 2 cut(s) 214, 801
KpnI GGTACC 1 cut(s) 964
Kzo9I GATC 2 cut(s) 504, 943
LmnI GCTCC 5 cut(s) 131, 221, 711, 733, 817
MaeI CTAG 2 cut(s) 161, 170
MaeII ACGT 4 cut(s) 73, 324, 431, 624
MaeIII GTNAC 3 cut(s) 179, 515, 614
MalI GATC 2 cut(s) 506, 945
MboI GATC 2 cut(s) 504, 943
MboII GAAGA 2 cut(s) 514, 907
MflI RGATCY 1 cut(s) 943
MhlI GDGCHC 1 cut(s) 650
MluCI AATT 1 cut(s) 484
MlyI GAGTC 4 cut(s) 248, 308, 386, 896
MmeI TCCRAC 2 cut(s) 282, 825
MseI TTAA 1 cut(s) 973
MspI CCGG 7 cut(s) 13, 50, 360, 650, 767, 824, 833
MspR9I CCNGG 3 cut(s) 14, 650, 768
MvnI CGCG 1 cut(s) 288
MwoI GCNNNNNNNGC 7 cut(s) 107, 140, 213, 230, 449, 458, 922
NciI CCSGG 3 cut(s) 14, 650, 768
NdeI CATATG 1 cut(s) 806
NdeII GATC 2 cut(s) 504, 943
NlaIII CATG 6 cut(s) 382, 391, 556, 646, 733, 745
NlaIV GGNNCC 3 cut(s) 54, 819, 962
NmuCI GTSAC 1 cut(s) 515
PcsI WCGNNNNNNNCGW 2 cut(s) 345, 460
PfeI GAWTC 1 cut(s) 373
PfoI TCCNGGA 1 cut(s) 12
PkrI GCNGC 9 cut(s) 23, 103, 136, 139, 142, 188, 275, 308, 910
PleI GAGTC 4 cut(s) 248, 308, 386, 895
PmaCI CACGTG 1 cut(s) 325
PmlI CACGTG 1 cut(s) 325
PpsI GAGTC 4 cut(s) 248, 308, 386, 895
Ppu21I YACGTR 1 cut(s) 325
PspCI CACGTG 1 cut(s) 325
PspN4I GGNNCC 3 cut(s) 54, 819, 962
PspPI GGNCC 2 cut(s) 148, 745
PsuI RGATCY 1 cut(s) 943
RsaI GTAC 4 cut(s) 168, 386, 695, 962
RsaNI GTAC 4 cut(s) 167, 385, 694, 961
SaqAI TTAA 1 cut(s) 973
SatI GCNGC 9 cut(s) 22, 102, 135, 138, 141, 187, 274, 307, 909
Sau3AI GATC 2 cut(s) 504, 943
Sau96I GGNCC 2 cut(s) 148, 745
SchI GAGTC 4 cut(s) 248, 308, 386, 896
ScrFI CCNGG 3 cut(s) 14, 650, 768
SduI GDGCHC 1 cut(s) 650
SinI GGWCC 1 cut(s) 148
Sse9I AATT 1 cut(s) 484
SspMI CTAG 2 cut(s) 161, 170
StyD4I CCNGG 3 cut(s) 12, 648, 766
StyI CCWWGG 1 cut(s) 444
TaaI ACNGT 7 cut(s) 179, 193, 268, 479, 515, 614, 677
TaiI ACGT 4 cut(s) 76, 327, 434, 627
TaqI TCGA 3 cut(s) 153, 348, 606
TasI AATT 1 cut(s) 484
TatI WGTACW 1 cut(s) 384
TauI GCSGC 9 cut(s) 24, 104, 137, 140, 143, 189, 276, 309, 911
TfiI GAWTC 1 cut(s) 373
Tru1I TTAA 1 cut(s) 973
Tru9I TTAA 1 cut(s) 973
TscAI CASTG 4 cut(s) 223, 271, 338, 706
TseFI GTSAC 1 cut(s) 515
Tsp45I GTSAC 1 cut(s) 515
TspGWI ACGGA 2 cut(s) 326, 744
TspRI CASTG 4 cut(s) 223, 271, 338, 706
VpaK11BI GGWCC 1 cut(s) 148
XcmI CCANNNNNNNNNTGG 2 cut(s) 103, 215
XmiI GTMKAC 1 cut(s) 195
XspI CTAG 2 cut(s) 161, 170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.