Rmu_sc0002658.1_g000022
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002658.1
OG0007618
Physical Location & Seq
Forward (+)
96843 .. 101782
4940 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3042 bp
atgtcatacgttttgaaggttgcatttgttggggctgtgacttgtacaatgttttctagattgaaattacacccgacagatgaaataaatggcaacctttatctttcttgcttgttctttgggttggtgcacatgatgtttaatgggttttccgagctacctcttatgatatctcggcttccagtcttttacaagcaaagagacaatcactttcatcctgcatgggcatggtctgttgttagtttgcttctgcgcataccttactctattatcgaagctgttgtctggtcttgtgtcgtatactactcggttggatttgcccctggtgctgggagatttttccgtttcatgtttttgctgttctctgtgcaccaaatggctttgggtctcttccggacaatggcatctcttgcaagagatatggtcattgccaatacatttggatcagctgcactaattattatattttcttttggtggattcatcattcccaaagctagcattaagccatggtgggaatgggccttttggatatcaccactatcatatggacaacgtgctctttctgtcaatgaatttacggctgtaaggtggatcaagatatctcctctaactaacagaacaattgggcaaagtgttctccaagaacacaacttaccaaatggtgattactggtattggattggagttggtgctctgttagcttatgcattgcttttcaattgcatagtgactctgaccttgatgtacctaaatccactaaggaaaaatcagacagtgcttccacttgatgacacacaagagagtcctgctgcagatgggggtaaatataagaccgagtctatcccaaaatcaactggagataacggcccaagaaagggaatgatcttaccatttcagccattaacaatgactttccacaatgttaactactctgttgacatgccaaaggaaatgaagtcacaaggtataccagaatcgaagttgaaactcttgtcggaggtgagtggagtgttctcaccaggtgttcttacagctttagttgggtctagtggagctggaaagaccactttgatggacgttcttgctggtaggaaaactggtggatacatagaaggacatatcaagatatctggttacccgaaagagcaacgaacttttgcaagaatagcaggatatgttgagcaaaatgacatacattctcctcaacttacagttgaagagtctctatggttttcttctgctcttcgccttccgaaggaagtcagcacagagaaaagacttttgaagagtctctatggttttcttctgctcttcgccttccgaaggaagtcagcacagagaaaagacttgaaaactggtggatacatagaaggacatatcaagatatctggttacccgaaagagcaacgaacttttgcaagaatagcaggatatgttgagcaaaatgacatacattctcctcaacttacagttgaagagtctctatggttttcttctgctcttcgccttccgaaggaagtcagcacagagaaaagacttgagtttgtcgaagaagtaatgaaactagtagagcttgatactctaaggcatgctttggttggtttgccaggcagttcaggcttatcaacagagcaaagaaaacgcttaacaatttctgttgagcttgttgccaacccttcaattatctttatggatgaacccacatctggacttgatgcaagggcagcagccattgtgatgaggactgttcgtaatacagttgatacaggaagaacggtggtctgcactatacatcaaccaagtattgacatatttgaggcatttgatgagcttcttcttatgaaacgaggggggcaagttatttatggaggaaacctaggccagcactcccagacaatgataaactactttcaggagatcaatggaatcactccgattccaagcgggtacaatccagcaacctggatgctggaggtaaccacaccggcttgtgaacagagaattggggaagacttcgctagcatatacagaaaatcagagcagtacagggaggtggaagagtccatcaagcagtttagcactcctccagctgactcaaaaccattagagtttgcttccacgtattcacaaaacacattggctcaattttggacctgcttatggaaacaaaatcttgtgtattggagaagtccacaatataatgccatgaggttaatctttactacccttgctgcattgatattcggttcagcattttgggatgttggtacaaaaagggactcaattcaatcattgatgatggttatgggagctctttattctgcttgcctgtttcttggggtcaataacgcttcttcagttcagccaattgtttcaattgagaggacagtattttatcgagagaaagcagctggaatgtattctcctttcgcttatgcagcggcccagggccttatagagatcccatacattgctgtgcagacaatagtatacggggtaatcacatacttcatggtcaattttgaaaggacaatcacaaaattcttgctctatattctgttcatgttcctcacattcacctacttcaccctttatggcatggcggctgttggtctcactccctctcaacacctggcagctgtcatctcttctgcattttactcattgtggaatctcctcgccggtttcctcatccccaaaccaaacatcccgccatggtggatatggttttactacatcaccccagttgcatggacacttagaggtattatcacttcccaacttggtgatgtggagaccattcttgtcggaccggcgtttaagggcactgtgaaagaatacttggaagtcagccttggctatggccctggaatgattggagtttcagtagctgtgctactgggtttcaactgcttcatgacatcattcttctacgagaggcccaagtcatcagaaagaggcaaaagtactagcatgaatgaattgctggaacaactcaaagctcaagtggcagagggtcttcaatctgcccagccatag

Protein Analysis

1013

Amino Acids

113.68

Weight (kDa)

8.87

Isoelectric Point (pI)

39.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC2_membrane PF01061 5 - 193 1.4e-41 ABC-2 type transporter
PDR_assoc PF08370 198 - 260 6.5e-23 Plant PDR ABC transporter associated
ABC_tran PF00005 333 - 423 9.9e-11 ABC transporter
ABC_tran PF00005 457 - 570 1.1e-08 ABC transporter
ABC2_membrane PF01061 716 - 928 7.3e-58 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 254
Acc36I ACCTGC 1 cut(s) 2165
AccI GTMKAC 3 cut(s) 300, 970, 2493
AccIII TCCGGA 1 cut(s) 393
AciI CCGC 4 cut(s) 1947, 2444, 2606, 2714
AclWI GGATC 3 cut(s) 451, 602, 2458
AcsI RAATTY 2 cut(s) 575, 2543
AcuI CTGAAG 1 cut(s) 2343
AdeI CACNNNGTG 1 cut(s) 1025
AfaI GTAC 6 cut(s) 46, 749, 1952, 2048, 2272, 2971
AfiI CCNNNNNNNGG 9 cut(s) 329, 400, 877, 878, 1258, 1326, 1516, 1709, 2163
AhlI ACTAGT 1 cut(s) 1567
AjnI CCWGG 7 cut(s) 322, 1021, 1609, 1964, 2448, 2634, 2869
AjuI GAANNNNNNNTTGG 6 cut(s) 1989, 2021, 2828, 2841, 2860, 2873
Alw21I GWGCWC 5 cut(s) 132, 372, 562, 697, 2317
Alw26I GTCTC 7 cut(s) 195, 392, 1230, 1298, 1488, 2621, 2792
Alw44I GTGCAC 2 cut(s) 128, 368
AlwI GGATC 3 cut(s) 451, 602, 2458
AlwNI CAGNNNCTG 1 cut(s) 2894
Aor13HI TCCGGA 1 cut(s) 393
AoxI GGCC 7 cut(s) 522, 868, 1882, 2445, 2452, 2866, 2942
ApaLI GTGCAC 2 cut(s) 128, 368
ApeKI GCWGC 8 cut(s) 449, 812, 1727, 1730, 2234, 2411, 2441, 2639
ApoI RAATTY 2 cut(s) 575, 2543
ArsI GACNNNNNNTTYG 2 cut(s) 267, 299
Asp700I GAANNNNTTC 1 cut(s) 2422
AspA2I CCTAGG 1 cut(s) 1879
AspLEI GCGC 1 cut(s) 255
AspS9I GGNCC 8 cut(s) 522, 869, 2154, 2446, 2452, 2813, 2867, 2943
AsuHPI GGTGA 8 cut(s) 528, 677, 1011, 1015, 2572, 2581, 2734, 2801
AsuNHI GCTAGC 2 cut(s) 497, 2021
AvaII GGWCC 2 cut(s) 2154, 2813
AvrII CCTAGG 1 cut(s) 1879
BaeGI GKGCMC 3 cut(s) 132, 372, 2831
BanII GRGCYC 1 cut(s) 2317
BarI GAAGNNNNNNTAC 2 cut(s) 2761, 2793
BbsI GAAGAC 2 cut(s) 2019, 3014
Bbv12I GWGCWC 5 cut(s) 132, 372, 562, 697, 2317
BbvI GCAGC 8 cut(s) 436, 799, 1739, 1742, 2221, 2423, 2453, 2651
BccI CCATC 4 cut(s) 812, 1069, 2075, 2296
BceAI ACGGC 2 cut(s) 597, 883
BciT130I CCWGG 7 cut(s) 324, 1023, 1611, 1966, 2450, 2636, 2871
BciVI GTATCC 2 cut(s) 1100, 1358
BcoDI GTCTC 7 cut(s) 195, 392, 1230, 1298, 1488, 2621, 2792
BcuI ACTAGT 1 cut(s) 1567
BfaI CTAG 7 cut(s) 57, 498, 1050, 1568, 1880, 2022, 2973
BfmI CTRYAG 1 cut(s) 813
BfuAI ACCTGC 1 cut(s) 2165
BfuI GTATCC 2 cut(s) 1100, 1358
BlnI CCTAGG 1 cut(s) 1879
BmcAI AGTACT 1 cut(s) 2971
Bme1390I CCNGG 7 cut(s) 324, 1023, 1611, 1966, 2450, 2636, 2871
Bme18I GGWCC 2 cut(s) 2154, 2813
BmgT120I GGNCC 8 cut(s) 522, 869, 2154, 2446, 2452, 2813, 2867, 2943
BmrFI CCNGG 7 cut(s) 324, 1023, 1611, 1966, 2450, 2636, 2871
BmrI ACTGGG 2 cut(s) 2741, 2912
BmsI GCATC 3 cut(s) 413, 1708, 1959
BmtI GCTAGC 2 cut(s) 501, 2025
BmuI ACTGGG 2 cut(s) 2741, 2912
BpiI GAAGAC 2 cut(s) 2019, 3014
BpmI CTGGAG 3 cut(s) 879, 1994, 2073
BpuEI CTTGAG 2 cut(s) 1562, 2991
BsaAI YACGTR 1 cut(s) 2124
BsaI GGTCTC 3 cut(s) 392, 2621, 2792
BsaJI CCNNGG 8 cut(s) 322, 509, 1879, 2448, 2449, 2717, 2857, 2869
BsaWI WCCGGW 1 cut(s) 393
BsaXI ACNNNNNCTCC 2 cut(s) 2874, 2904
Bsc4I CCNNNNNNNGG 9 cut(s) 329, 400, 877, 878, 1258, 1326, 1516, 1709, 2163
Bse118I RCCGGY 3 cut(s) 1987, 2684, 2815
Bse1I ACTGG 7 cut(s) 182, 677, 862, 1105, 1363, 2747, 2907
Bse3DI GCAATG 3 cut(s) 426, 710, 2472
BseAI TCCGGA 1 cut(s) 393
BseBI CCWGG 7 cut(s) 324, 1023, 1611, 1966, 2450, 2636, 2871
BseDI CCNNGG 8 cut(s) 322, 509, 1879, 2448, 2449, 2717, 2857, 2869
BseGI GGATG 6 cut(s) 214, 1702, 1974, 2269, 2694, 2709
BseLI CCNNNNNNNGG 9 cut(s) 329, 400, 877, 878, 1258, 1326, 1516, 1709, 2163
BseMI GCAATG 3 cut(s) 426, 710, 2472
BseNI ACTGG 7 cut(s) 182, 677, 862, 1105, 1363, 2747, 2907
BseRI GAGGAG 5 cut(s) 597, 1194, 1452, 2076, 2669
BseSI GKGCMC 3 cut(s) 132, 372, 2831
BseXI GCAGC 8 cut(s) 436, 799, 1739, 1742, 2221, 2423, 2453, 2651
BseYI CCCAGC 2 cut(s) 329, 3033
BsgI GTGCAG 3 cut(s) 435, 1771, 2501
BshFI GGCC 7 cut(s) 524, 870, 1884, 2447, 2454, 2868, 2944
BsiHKAI GWGCWC 5 cut(s) 132, 372, 562, 697, 2317
BsiSI CCGG 4 cut(s) 394, 1988, 2685, 2816
BslFI GGGAC 1 cut(s) 2294
BslI CCNNNNNNNGG 9 cut(s) 329, 400, 877, 878, 1258, 1326, 1516, 1709, 2163
BsmAI GTCTC 7 cut(s) 195, 392, 1230, 1298, 1488, 2621, 2792
BsmFI GGGAC 1 cut(s) 2294
BsnI GGCC 7 cut(s) 524, 870, 1884, 2447, 2454, 2868, 2944
Bso31I GGTCTC 3 cut(s) 392, 2621, 2792
Bsp1286I GDGCHC 6 cut(s) 132, 372, 562, 697, 2317, 2831
Bsp13I TCCGGA 1 cut(s) 393
Bsp1407I TGTACA 1 cut(s) 44
Bsp143I GATC 5 cut(s) 443, 594, 885, 1920, 2463
Bsp19I CCATGG 2 cut(s) 509, 2717
BspACI CCGC 4 cut(s) 1947, 2444, 2606, 2714
BspANI GGCC 7 cut(s) 524, 870, 1884, 2447, 2454, 2868, 2944
BspEI TCCGGA 1 cut(s) 393
BspHI TCATGA 1 cut(s) 2919
BspMAI CTGCAG 1 cut(s) 817
BspMI ACCTGC 1 cut(s) 2165
BspOI GCTAGC 2 cut(s) 501, 2025
BspPI GGATC 3 cut(s) 451, 602, 2458
BspQI GCTCTTC 3 cut(s) 1251, 1319, 1509
BspTNI GGTCTC 3 cut(s) 392, 2621, 2792
BsrDI GCAATG 3 cut(s) 426, 710, 2472
BsrFI RCCGGY 3 cut(s) 1987, 2684, 2815
BsrGI TGTACA 1 cut(s) 44
BsrI ACTGG 7 cut(s) 182, 677, 862, 1105, 1363, 2747, 2907
BssAI RCCGGY 3 cut(s) 1987, 2684, 2815
BssECI CCNNGG 8 cut(s) 322, 509, 1879, 2448, 2449, 2717, 2857, 2869
BssMI GATC 5 cut(s) 443, 594, 885, 1920, 2463
BssNAI GTATAC 3 cut(s) 301, 971, 2494
BssT1I CCWWGG 4 cut(s) 509, 1879, 2717, 2857
Bst1107I GTATAC 3 cut(s) 301, 971, 2494
Bst2UI CCWGG 7 cut(s) 324, 1023, 1611, 1966, 2450, 2636, 2871
Bst4CI ACNGT 8 cut(s) 778, 1216, 1474, 1750, 1762, 1780, 2392, 2833
Bst6I CTCTTC 9 cut(s) 395, 1215, 1251, 1283, 1319, 1473, 1509, 2055, 2656
BstAPI GCANNNNNTGC 1 cut(s) 410
BstAUI TGTACA 1 cut(s) 44
BstBAI YACGTR 1 cut(s) 2124
BstC8I GCNNGC 5 cut(s) 499, 1593, 1886, 2023, 2329
BstDEI CTNAG 3 cut(s) 761, 1586, 2762
BstDSI CCRYGG 2 cut(s) 509, 2717
BstEII GGTNACC 3 cut(s) 1136, 1394, 1978
BstENI CCTNNNNNAGG 3 cut(s) 1256, 1324, 1514
BstF5I GGATG 6 cut(s) 214, 1702, 1974, 2269, 2694, 2709
BstHHI GCGC 1 cut(s) 255
BstKTI GATC 5 cut(s) 446, 597, 888, 1923, 2466
BstMAI GTCTC 7 cut(s) 195, 392, 1230, 1298, 1488, 2621, 2792
BstMBI GATC 5 cut(s) 443, 594, 885, 1920, 2463
BstMWI GCNNNNNNNGC 9 cut(s) 326, 410, 701, 1169, 1427, 1620, 1727, 2441, 3011
BstNI CCWGG 7 cut(s) 324, 1023, 1611, 1966, 2450, 2636, 2871
BstNSI RCATGY 2 cut(s) 946, 1595
BstPI GGTNACC 3 cut(s) 1136, 1394, 1978
BstSCI CCNGG 7 cut(s) 322, 1021, 1609, 1964, 2448, 2634, 2869
BstSFI CTRYAG 1 cut(s) 813
BstSLI GKGCMC 3 cut(s) 132, 372, 2831
BstV1I GCAGC 8 cut(s) 436, 799, 1739, 1742, 2221, 2423, 2453, 2651
BstV2I GAAGAC 2 cut(s) 2019, 3014
BstX2I RGATCY 1 cut(s) 2463
BstXI CCANNNNNNTGG 3 cut(s) 1075, 1965, 2754
BstYI RGATCY 1 cut(s) 2463
BstZ17I GTATAC 3 cut(s) 301, 971, 2494
BsuI GTATCC 2 cut(s) 1100, 1358
BsuRI GGCC 7 cut(s) 524, 870, 1884, 2447, 2454, 2868, 2944
BtgI CCRYGG 2 cut(s) 509, 2717
BtsCI GGATG 6 cut(s) 214, 1702, 1974, 2269, 2694, 2709
BtsIMutI CAGTG 2 cut(s) 783, 2829
BveI ACCTGC 1 cut(s) 2165
Cac8I GCNNGC 5 cut(s) 499, 1593, 1886, 2023, 2329
CaiI CAGNNNCTG 1 cut(s) 2894
CciI TCATGA 1 cut(s) 2919
CfoI GCGC 1 cut(s) 255
Cfr10I RCCGGY 3 cut(s) 1987, 2684, 2815
Cfr13I GGNCC 8 cut(s) 522, 869, 2154, 2446, 2452, 2813, 2867, 2943
CpoI CGGWCCG 1 cut(s) 2813
CsiI ACCWGGT 1 cut(s) 1021
Csp6I GTAC 6 cut(s) 45, 748, 1951, 2047, 2271, 2970
CspI CGGWCCG 1 cut(s) 2813
CviQI GTAC 6 cut(s) 45, 748, 1951, 2047, 2271, 2970
DdeI CTNAG 3 cut(s) 761, 1586, 2762
DpnI GATC 5 cut(s) 445, 596, 887, 1922, 2465
DpnII GATC 5 cut(s) 443, 594, 885, 1920, 2463
DraIII CACNNNGTG 1 cut(s) 1025
Eam1104I CTCTTC 9 cut(s) 395, 1215, 1251, 1283, 1319, 1473, 1509, 2055, 2656
EarI CTCTTC 9 cut(s) 395, 1215, 1251, 1283, 1319, 1473, 1509, 2055, 2656
Ecl136II GAGCTC 1 cut(s) 2315
Eco130I CCWWGG 4 cut(s) 509, 1879, 2717, 2857
Eco24I GRGCYC 1 cut(s) 2317
Eco31I GGTCTC 3 cut(s) 392, 2621, 2792
Eco32I GATATC 5 cut(s) 171, 534, 603, 1131, 1389
Eco47I GGWCC 2 cut(s) 2154, 2813
Eco53kI GAGCTC 1 cut(s) 2315
Eco57I CTGAAG 1 cut(s) 2343
Eco91I GGTNACC 3 cut(s) 1136, 1394, 1978
EcoICRI GAGCTC 1 cut(s) 2315
EcoNI CCTNNNNNAGG 3 cut(s) 1256, 1324, 1514
EcoO109I RGGNCCY 1 cut(s) 2452
EcoO65I GGTNACC 3 cut(s) 1136, 1394, 1978
EcoRII CCWGG 7 cut(s) 322, 1021, 1609, 1964, 2448, 2634, 2869
EcoRV GATATC 5 cut(s) 171, 534, 603, 1131, 1389
EcoT14I CCWWGG 4 cut(s) 509, 1879, 2717, 2857
EcoT22I ATGCAT 1 cut(s) 712
EcoT38I GRGCYC 1 cut(s) 2317
ErhI CCWWGG 4 cut(s) 509, 1879, 2717, 2857
FalI AAGNNNNNCTT 4 cut(s) 1579, 1611, 2841, 2873
FaqI GGGAC 1 cut(s) 2294
FauI CCCGC 2 cut(s) 1940, 2721
FauNDI CATATG 1 cut(s) 547
FblI GTMKAC 3 cut(s) 300, 970, 2493
FokI GGATG 6 cut(s) 201, 1709, 1981, 2276, 2681, 2696
FriOI GRGCYC 1 cut(s) 2317
FspBI CTAG 7 cut(s) 57, 498, 1050, 1568, 1880, 2022, 2973
FspI TGCGCA 1 cut(s) 254
GlaI GCGC 1 cut(s) 254
GsaI CCCAGC 2 cut(s) 333, 3037
GsuI CTGGAG 3 cut(s) 879, 1994, 2073
HaeIII GGCC 7 cut(s) 524, 870, 1884, 2447, 2454, 2868, 2944
HapII CCGG 4 cut(s) 394, 1988, 2685, 2816
HhaI GCGC 1 cut(s) 255
Hin6I GCGC 1 cut(s) 253
HinP1I GCGC 1 cut(s) 253
HincII GTYRAC 2 cut(s) 928, 940
HindII GTYRAC 2 cut(s) 928, 940
HpaI GTTAAC 1 cut(s) 928
HpaII CCGG 4 cut(s) 394, 1988, 2685, 2816
HphI GGTGA 8 cut(s) 528, 677, 1011, 1015, 2572, 2581, 2734, 2801
Hpy166II GTNNAC 9 cut(s) 130, 301, 370, 928, 940, 971, 1997, 2195, 2494
Hpy188III TCNNGA 9 cut(s) 57, 394, 598, 1126, 1384, 1710, 1916, 2402, 2920
Hpy8I GTNNAC 9 cut(s) 130, 301, 370, 928, 940, 971, 1997, 2195, 2494
HpyCH4III ACNGT 8 cut(s) 778, 1216, 1474, 1750, 1762, 1780, 2392, 2833
HpyCH4IV ACGT 4 cut(s) 9, 556, 1080, 2123
HpyF10VI GCNNNNNNNGC 9 cut(s) 326, 410, 701, 1169, 1427, 1620, 1727, 2441, 3011
HpyF3I CTNAG 3 cut(s) 761, 1586, 2762
HpySE526I ACGT 4 cut(s) 9, 556, 1080, 2123
HspAI GCGC 1 cut(s) 253
Kpn2I TCCGGA 1 cut(s) 393
KspAI GTTAAC 1 cut(s) 928
Kzo9I GATC 5 cut(s) 443, 594, 885, 1920, 2463
LguI GCTCTTC 3 cut(s) 1251, 1319, 1509
LmnI GCTCC 2 cut(s) 1055, 2312
Lsp1109I GCAGC 8 cut(s) 436, 799, 1739, 1742, 2221, 2423, 2453, 2651
LweI GCATC 3 cut(s) 413, 1708, 1959
MabI ACCWGGT 1 cut(s) 1021
MaeI CTAG 7 cut(s) 57, 498, 1050, 1568, 1880, 2022, 2973
MaeII ACGT 4 cut(s) 9, 556, 1080, 2123
MaeIII GTNAC 6 cut(s) 37, 730, 960, 1136, 1394, 1978
MalI GATC 5 cut(s) 445, 596, 887, 1922, 2465
MboI GATC 5 cut(s) 443, 594, 885, 1920, 2463
MfeI CAATTG 4 cut(s) 624, 721, 2370, 2379
MflI RGATCY 1 cut(s) 2463
MhlI GDGCHC 6 cut(s) 132, 372, 562, 697, 2317, 2831
MlyI GAGTC 9 cut(s) 727, 814, 848, 1232, 1300, 1490, 2072, 2090, 2276
MmeI TCCRAC 3 cut(s) 292, 978, 2791
Mph1103I ATGCAT 1 cut(s) 712
MroI TCCGGA 1 cut(s) 393
MroXI GAANNNNTTC 1 cut(s) 2422
MseI TTAA 7 cut(s) 141, 504, 905, 927, 1649, 2216, 2823
MslI CAYNNNNRTG 4 cut(s) 226, 1073, 1739, 2477
MspA1I CMGCKG 5 cut(s) 449, 2093, 2414, 2444, 2642
MspI CCGG 4 cut(s) 394, 1988, 2685, 2816
MspR9I CCNGG 7 cut(s) 324, 1023, 1611, 1966, 2450, 2636, 2871
MunI CAATTG 4 cut(s) 624, 721, 2370, 2379
MvaI CCWGG 7 cut(s) 324, 1023, 1611, 1966, 2450, 2636, 2871
MwoI GCNNNNNNNGC 9 cut(s) 326, 410, 701, 1169, 1427, 1620, 1727, 2441, 3011
NcoI CCATGG 2 cut(s) 509, 2717
NdeI CATATG 1 cut(s) 547
NdeII GATC 5 cut(s) 443, 594, 885, 1920, 2463
NheI GCTAGC 2 cut(s) 497, 2021
NmeAIII GCCGAG 1 cut(s) 154
NmuCI GTSAC 3 cut(s) 37, 730, 960
NsbI TGCGCA 1 cut(s) 254
NsiI ATGCAT 1 cut(s) 712
NspI RCATGY 2 cut(s) 946, 1595
PaeI GCATGC 1 cut(s) 1595
PagI TCATGA 1 cut(s) 2919
PasI CCCWGGG 1 cut(s) 2449
PciSI GCTCTTC 3 cut(s) 1251, 1319, 1509
PdmI GAANNNNTTC 1 cut(s) 2422
PfeI GAWTC 5 cut(s) 480, 977, 1929, 1939, 2674
PflFI GACNNNGTC 1 cut(s) 838
PleI GAGTC 9 cut(s) 727, 813, 847, 1231, 1299, 1489, 2071, 2090, 2276
PpsI GAGTC 9 cut(s) 727, 813, 847, 1231, 1299, 1489, 2071, 2090, 2276
Ppu21I YACGTR 1 cut(s) 2124
Psp124BI GAGCTC 1 cut(s) 2317
Psp6I CCWGG 7 cut(s) 322, 1021, 1609, 1964, 2448, 2634, 2869
PspEI GGTNACC 3 cut(s) 1136, 1394, 1978
PspFI CCCAGC 2 cut(s) 329, 3033
PspGI CCWGG 7 cut(s) 322, 1021, 1609, 1964, 2448, 2634, 2869
PspPI GGNCC 8 cut(s) 522, 869, 2154, 2446, 2452, 2813, 2867, 2943
PsrI GAACNNNNNNTAC 2 cut(s) 639, 671
PstI CTGCAG 1 cut(s) 817
PstNI CAGNNNCTG 1 cut(s) 2894
PsuI RGATCY 1 cut(s) 2463
PsyI GACNNNGTC 1 cut(s) 838
PvuII CAGCTG 4 cut(s) 449, 2093, 2414, 2642
RsaI GTAC 6 cut(s) 46, 749, 1952, 2048, 2272, 2971
RsaNI GTAC 6 cut(s) 45, 748, 1951, 2047, 2271, 2970
RseI CAYNNNNRTG 4 cut(s) 226, 1073, 1739, 2477
Rsr2I CGGWCCG 1 cut(s) 2813
RsrII CGGWCCG 1 cut(s) 2813
SacI GAGCTC 1 cut(s) 2317
SapI GCTCTTC 3 cut(s) 1251, 1319, 1509
SaqAI TTAA 7 cut(s) 141, 504, 905, 927, 1649, 2216, 2823
Sau3AI GATC 5 cut(s) 443, 594, 885, 1920, 2463
Sau96I GGNCC 8 cut(s) 522, 869, 2154, 2446, 2452, 2813, 2867, 2943
ScaI AGTACT 1 cut(s) 2971
SchI GAGTC 9 cut(s) 727, 814, 848, 1232, 1300, 1490, 2072, 2090, 2276
ScrFI CCNGG 7 cut(s) 324, 1023, 1611, 1966, 2450, 2636, 2871
SduI GDGCHC 6 cut(s) 132, 372, 562, 697, 2317, 2831
SexAI ACCWGGT 1 cut(s) 1021
SfaNI GCATC 3 cut(s) 413, 1708, 1959
SfcI CTRYAG 1 cut(s) 813
SinI GGWCC 2 cut(s) 2154, 2813
SmiMI CAYNNNNRTG 4 cut(s) 226, 1073, 1739, 2477
SmlI CTYRAG 2 cut(s) 1541, 3006
SmoI CTYRAG 2 cut(s) 1541, 3006
SpeI ACTAGT 1 cut(s) 1567
SphI GCATGC 1 cut(s) 1595
SsiI CCGC 4 cut(s) 1947, 2444, 2606, 2714
SspMI CTAG 7 cut(s) 57, 498, 1050, 1568, 1880, 2022, 2973
SstI GAGCTC 1 cut(s) 2317
StyD4I CCNGG 7 cut(s) 322, 1021, 1609, 1964, 2448, 2634, 2869
StyI CCWWGG 4 cut(s) 509, 1879, 2717, 2857
TaaI ACNGT 8 cut(s) 778, 1216, 1474, 1750, 1762, 1780, 2392, 2833
TaiI ACGT 4 cut(s) 12, 559, 1083, 2126
TaqI TCGA 4 cut(s) 273, 980, 1551, 2401
TaqII GACCGA 1 cut(s) 851
TatI WGTACW 3 cut(s) 44, 2046, 2969
TauI GCSGC 2 cut(s) 2447, 2609
TfiI GAWTC 5 cut(s) 480, 977, 1929, 1939, 2674
Tru1I TTAA 7 cut(s) 141, 504, 905, 927, 1649, 2216, 2823
Tru9I TTAA 7 cut(s) 141, 504, 905, 927, 1649, 2216, 2823
TscAI CASTG 2 cut(s) 783, 2836
TseFI GTSAC 3 cut(s) 37, 730, 960
TseI GCWGC 8 cut(s) 449, 812, 1727, 1730, 2234, 2411, 2441, 2639
Tsp45I GTSAC 3 cut(s) 37, 730, 960
TspGWI ACGGA 1 cut(s) 332
TspRI CASTG 2 cut(s) 783, 2836
Tth111I GACNNNGTC 1 cut(s) 838
VneI GTGCAC 2 cut(s) 128, 368
VpaK11BI GGWCC 2 cut(s) 2154, 2813
XagI CCTNNNNNAGG 3 cut(s) 1256, 1324, 1514
XapI RAATTY 2 cut(s) 575, 2543
XbaI TCTAGA 1 cut(s) 56
XceI RCATGY 2 cut(s) 946, 1595
XcmI CCANNNNNNNNNTGG 2 cut(s) 516, 2724
XmaJI CCTAGG 1 cut(s) 1879
XmiI GTMKAC 3 cut(s) 300, 970, 2493
XmnI GAANNNNTTC 1 cut(s) 2422
XspI CTAG 7 cut(s) 57, 498, 1050, 1568, 1880, 2022, 2973
ZrmI AGTACT 1 cut(s) 2971
Zsp2I ATGCAT 1 cut(s) 712
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.