Rmu_sc0003314.1_g000031

ABC transporter C family member 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003314.1
OG0002044
Physical Location & Seq
Forward (+)
118020 .. 123651
5632 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 4281 bp
atggcggaaggtttctggaccttgttttgtgattgtccaactgagtctggaattgaatgcagttctgacattgcagccattatcaatccagattcatgtatcaacaatattgcggtcattgcagttgatatcttgcttctgttcatcttgttttgtatcttcatctatataacattatcaaagaaggttacagcgtcatcagagtcttacaccatctctgctgtgtcaattgtttcggccactttcaatgcctgtttgtctttggcctatttgggttttgggatatggaaaacgatcgagaaagtaaatacagatcagacttgtttacctctgcatggatggatagtatttttctttcaggggtttacttggttggtgctgggattaaccataaacctgaagaagccaaaccctccccgaattgcgataacaaaagttctttcaattcttggcttttttattgcagtttttctttgtggttcatcgatttgggaagcaactcttgatgaagcagtatcggttatgattgttttggacattctttgttttcctggatcagttctcttgctttttagtgcatttgatggaagcagtgttgctaacggtgatccacaagtccatgttgacgatgctttgcatacacctttgctgggtgcagaatcggatatcgcaggtgaaatcacttcaaatcatgacaatgttactccttttgcaaaagctggtttatttagtgtaatgtcattttggtggctgaatccattaatgaaaaaaggaaaggggaagattcttgagaatgaagatatcccacagctgcgacaagctgatcaagcacggacattgtacttgatgtttacggagcaagtgcagaaaaggaaggaaagcagctcatctgatgatgacccttctattttgtccacaattcttttctgccagaggaaagctatattaatttctggtatatttgcactcatcaaggttctcacattgactagtggtcctctgtttctgatggccttcattagtgtcgttgaaggagaagcagcttttgaaggtgaaggctatgcactgacagctggtctctttgtggttaaagtcgtggagtcattgtcggagaggcaatggttcttcagaactagatttattggtctccaggtaagatcattgatatctgcagcaatatatcagaagcaactaagactctcaaatgctgccaagatgactcattctcctggtgagatagtgaattatgtgagcgtggatgcttatagaatcggtgaatttccattctggtttcatcagatatggtccacaagccttcagctttgtctctcattacttattgtttacttctctgttggaatagcaactctcgcagctctaactgtgctcatattgattgtgctggcaagctctccattggtcaagttgcagcatgattatcaaacaaagttcatggtagctcaaaataagaggctgaaggctataacagaagcactatcaaatatgaagatcttaaagctgtattcatgggagacaaatttcaagaaagtcatagaggggttaagagcagaagaactcaaatggataaataaagtactgttacaaaaggggtattatatcactttgttctggtcatctcctattttggtagcagccgttaccttttggacgtgctacttcctgggaattacactcactgctagtaatgttttcacatttctagcaactttgcgtattgttcaggagccaattaggcttatcccagatatttttggatcatttattgaagccaaggtctcattctcgcgcattgtgaagttccttgatgcacaggagttggagaacagagatacaaggaaagagaatattggcaaagaggctgagcattccattttcattagagcctccgaaatttcatgggacactgatgcaaccaaggccacattaaggaacttgaacttggtggttgaaccaggagaaaaagtagctctttgtggagaggttggctccggtaaatcaacccttttagctgcaattctaggagaagttcccctcatcaatggtattgttcaagtgcatgggaagatagcatatgttcctcaatcggcatggattcaaacaggaagtatacaagaaaatattctgtttggatccaccatggatcatgtcaggtaccaagagacgcttaataagtgttcgttagttaaggatctagagatccttccatttggagatctcactcagataggagaaagaggtgtcaatctaagtggtggccaaaagcagcgcattcaacttgcgcgtgccctctatcaaaatgctgatgtctatctcttggatgaccctttcagtgcagttgatgctcatactgcaagcagcctattcaatgattatgtcatgggagctctggcaaagaagacggtgttgcttgtgacacatcaagtcgactttcttccgggttttagttctattttgttgatgtcttcagggaaaattttaagggcaggaccttacaaagagttgctggcttcttgtcaagagttccaagaccttgtcaatgcacataatgacactgctggttccgagagtcaagttgaatatgctgctactagaaaacataaatcatctgccgaggaggttgaaaaagttaatactgaggcttattggttggcttcgaatcttcaggattataaggtgtcaagagtcgagctcttcggagtttattcattgatcatgtgtatcatttcattctgtttgcttctacgctctcttaaggtagtccaattaggatgtggagcatcaagatccattttctttacactactgaactcccttttccgggcaccaatgctgttttacgattcaacacctctggggaggatacttagtcgagtatctctagatatgaatatcattgaccttgaagtagctttaaagctatccatagctgttgggacaactctgaacgcttatagcatattcttagtaatgatttatcttacttggccactcgtgtttctgattataccgacactttatgctacctttcgctttcagaattactactttgcgtctgcgaaagagttaatgcgaatgaatggcacgactaagtctgcacttgcaagccacatttctgaatctattgctggagccgtgacaatcagagcttttggagaggaggaaagatttttctccaaaaacttggaattcattgatgcaaattctagtgctgacttcaatagcttttcaacaaatgaatggttaattcaacgtctagaattgcttagcgccattgttctctcagcctcaacacttgccattactttgactcaatttgatgcttcttcttctggatttattgggatgacactatcatatggcctttcattaaatgtattcctagtaatttctgtccaataccagtgcatgctagcaaattcaataatttctgtagaaagggtggaacaatacatgcacattcccagcgaagccaatgaagtaatagaagaaaaccgaccggcacacaattggcctattgttggtaaagtggaaatacatgacttaaaggtaagatataggccaaattctccttttgttctccacgggataaattgcatcattgagggaggctacaaaattggaattgttggccggactggaagtggaaagacaactcttgtcagcgttttgtttcgtctggtagagccaacagagggaaaagtcattgtagatggctatgacatttgtacaattggccttcatgatttgagatcacgttttgggatcatcccacaagatccgacattattcagtgggtctgtgagattcaatctggaccccttatcagagcatactgatcgtgagatatgggagttacgagaggccatcagagaaaaagaagagggcttggattctttagttgtggaagatggaacaaactggagcatgggacagcgacagctattctgcttggggcgcgctttattgaagaggagccgaatactagtgctggatgaagctactgcatcgatggacaatacaacagactctattctccagaaaactataagtgcggaattcgtagactccactgttataacagtggcccataggataccaaccgtgatggactgcactaaggtgcttgctcttagtgatggtaaagtagtggagtatgatgagccaattaagctgatgaacaatgagggatcactgttcgggcagcttgtcaaggaatattggtctcgttctgccaaagctagtatgcattcggaggattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1426

Amino Acids

158.48

Weight (kDa)

5.62

Isoelectric Point (pI)

34.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABCC10_N PF24358 3 - 197 8.5e-68 ABCC10 N-terminal domain
ABC_membrane PF00664 315 - 583 3.6e-26 ABC transporter transmembrane region
ABC_tran PF00005 649 - 783 1.9e-22 ABC transporter
ABC_membrane PF00664 891 - 1125 1.4e-24 ABC transporter transmembrane region
ABC_tran PF00005 1200 - 1342 1.6e-24 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2691, 4097
AarI CACCTGC 1 cut(s) 662
Acc36I ACCTGC 1 cut(s) 662
Acc65I GGTACC 1 cut(s) 2172
AccB1I GGYRCC 2 cut(s) 2172, 2842
AccI GTMKAC 3 cut(s) 2128, 2445, 4083
AccII CGCG 3 cut(s) 1807, 2302, 3978
AciI CCGC 3 cut(s) 5, 113, 4073
AcoI YGGCCR 4 cut(s) 237, 2275, 3005, 3649
AcsI RAATTY 9 cut(s) 1277, 1537, 1911, 2493, 3206, 3220, 3436, 3583, 4076
AcuI CTGAAG 6 cut(s) 419, 1111, 1301, 1496, 2469, 2666
AfaI GTAC 4 cut(s) 842, 1596, 2174, 3748
AfiI CCNNNNNNNGG 7 cut(s) 335, 650, 1947, 2838, 2839, 3539, 3713
AflII CTTAAG 1 cut(s) 2771
AhdI GACNNNNNGTC 2 cut(s) 993, 1074
AhlI ACTAGT 2 cut(s) 989, 4003
AjiI CACGTC 1 cut(s) 1671
AjnI CCWGG 5 cut(s) 550, 1149, 1228, 1680, 1972
AjuI GAANNNNNNNTTGG 4 cut(s) 1784, 1816, 1943, 1975
AleI CACNNNNGTG 1 cut(s) 4139
Alw21I GWGCWC 3 cut(s) 1389, 2407, 2712
Alw26I GTCTC 7 cut(s) 1082, 1151, 1331, 1526, 1801, 2174, 4248
ApoI RAATTY 9 cut(s) 1277, 1537, 1911, 2493, 3206, 3220, 3436, 3583, 4076
AseI ATTAAT 2 cut(s) 761, 947
Asp700I GAANNNNTTC 1 cut(s) 2139
Asp718I GGTACC 1 cut(s) 2172
AspLEI GCGC 6 cut(s) 1809, 2289, 2302, 3290, 3978, 3980
AspS9I GGNCC 6 cut(s) 18, 995, 1305, 2507, 3835, 4105
AsuC2I CCSGG 2 cut(s) 2457, 2840
AsuHPI GGTGA 5 cut(s) 617, 686, 1064, 1244, 1286
AsuII TTCGAA 1 cut(s) 2675
AsuNHI GCTAGC 1 cut(s) 3430
AvaII GGWCC 5 cut(s) 18, 995, 1305, 2507, 3835
BaeGI GKGCMC 2 cut(s) 2308, 2845
BalI TGGCCA 2 cut(s) 2277, 3007
BamHI GGATCC 1 cut(s) 2150
BanI GGYRCC 2 cut(s) 2172, 2842
BanII GRGCYC 2 cut(s) 2407, 2712
BauI CACGAG 1 cut(s) 3011
BbsI GAAGAC 2 cut(s) 2423, 2475
Bbv12I GWGCWC 3 cut(s) 1389, 2407, 2712
BceAI ACGGC 2 cut(s) 1640, 3137
BcgI CGANNNNNNTGC 2 cut(s) 3839, 3873
BciT130I CCWGG 5 cut(s) 552, 1151, 1230, 1682, 1974
BciVI GTATCC 2 cut(s) 2874, 4107
BclI TGATCA 2 cut(s) 823, 2730
BcnI CCSGG 2 cut(s) 2457, 2840
BcoDI GTCTC 7 cut(s) 1082, 1151, 1331, 1526, 1801, 2174, 4248
BcuI ACTAGT 2 cut(s) 989, 4003
BfmI CTRYAG 2 cut(s) 1170, 3450
BfoI RGCGCY 1 cut(s) 3291
BfrI CTTAAG 1 cut(s) 2771
BfuAI ACCTGC 1 cut(s) 662
BfuI GTATCC 2 cut(s) 2874, 4107
BglI GCCNNNNNGGC 1 cut(s) 1753
BglII AGATCT 2 cut(s) 1509, 2233
BlpI GCTNAGC 2 cut(s) 1881, 3284
BmcAI AGTACT 1 cut(s) 1596
Bme1390I CCNGG 7 cut(s) 552, 1151, 1230, 1682, 1974, 2457, 2840
Bme18I GGWCC 5 cut(s) 18, 995, 1305, 2507, 3835
BmeRI GACNNNNNGTC 2 cut(s) 993, 1074
BmgBI CACGTC 1 cut(s) 1671
BmgT120I GGNCC 6 cut(s) 18, 995, 1305, 2507, 3835, 4105
BmiI GGNNCC 9 cut(s) 1746, 2008, 2152, 2174, 2581, 2844, 3151, 3837, 3995
BmrFI CCNGG 7 cut(s) 552, 1151, 1230, 1682, 1974, 2457, 2840
BmtI GCTAGC 1 cut(s) 3434
BpiI GAAGAC 2 cut(s) 2423, 2475
BplI GAGNNNNNCTC 4 cut(s) 1991, 2023, 2694, 2726
BpmI CTGGAG 4 cut(s) 1133, 3168, 3961, 4040
Bpu1102I GCTNAGC 2 cut(s) 1881, 3284
Bpu14I TTCGAA 1 cut(s) 2675
BpuEI CTTGAG 1 cut(s) 809
BpuMI CCSGG 2 cut(s) 2457, 2840
Bsa29I ATCGAT 2 cut(s) 485, 4028
BsaBI GATNNNNATC 1 cut(s) 2328
BsaI GGTCTC 4 cut(s) 1082, 1151, 1801, 4248
BsaJI CCNNGG 6 cut(s) 1681, 1791, 1935, 2157, 2631, 3601
BsaWI WCCGGW 1 cut(s) 2009
BsaXI ACNNNNNCTCC 6 cut(s) 1091, 1121, 1210, 1240, 1968, 1998
Bsc4I CCNNNNNNNGG 7 cut(s) 335, 650, 1947, 2838, 2839, 3539, 3713
Bse118I RCCGGY 1 cut(s) 3517
Bse1I ACTGG 3 cut(s) 3421, 3661, 3944
Bse3DI GCAATG 3 cut(s) 69, 117, 1124
Bse8I GATNNNNATC 1 cut(s) 2328
BseBI CCWGG 5 cut(s) 552, 1151, 1230, 1682, 1974
BseCI ATCGAT 2 cut(s) 485, 4028
BseDI CCNNGG 6 cut(s) 1681, 1791, 1935, 2157, 2631, 3601
BseGI GGATG 7 cut(s) 344, 1264, 2344, 2795, 3369, 3786, 4018
BseJI GATNNNNATC 1 cut(s) 2328
BseLI CCNNNNNNNGG 7 cut(s) 335, 650, 1947, 2838, 2839, 3539, 3713
BseMI GCAATG 3 cut(s) 69, 117, 1124
BseMII CTCAG 5 cut(s) 33, 1872, 2255, 2646, 3315
BseNI ACTGG 3 cut(s) 3421, 3661, 3944
BsePI GCGCGC 1 cut(s) 3976
BseRI GAGGAG 3 cut(s) 2648, 3191, 4006
BseSI GKGCMC 2 cut(s) 2308, 2845
BseYI CCCAGC 3 cut(s) 379, 649, 3482
BsgI GTGCAG 5 cut(s) 675, 884, 2373, 3099, 4117
Bsh1236I CGCG 3 cut(s) 1807, 2302, 3978
Bsh1285I CGRYCG 2 cut(s) 297, 3518
BshNI GGYRCC 2 cut(s) 2172, 2842
BshVI ATCGAT 2 cut(s) 485, 4028
BsiEI CGRYCG 2 cut(s) 297, 3518
BsiHKAI GWGCWC 3 cut(s) 1389, 2407, 2712
BsiSI CCGG 5 cut(s) 2010, 2456, 2839, 3518, 3652
BslFI GGGAC 3 cut(s) 1934, 2968, 3963
BslI CCNNNNNNNGG 7 cut(s) 335, 650, 1947, 2838, 2839, 3539, 3713
BsmAI GTCTC 7 cut(s) 1082, 1151, 1331, 1526, 1801, 2174, 4248
BsmBI CGTCTC 1 cut(s) 2174
BsmFI GGGAC 3 cut(s) 1934, 2968, 3963
BsmI GAATGC 4 cut(s) 62, 1885, 2289, 4267
Bso31I GGTCTC 4 cut(s) 1082, 1151, 1801, 4248
Bsp119I TTCGAA 1 cut(s) 2675
Bsp1286I GDGCHC 5 cut(s) 1389, 2308, 2407, 2712, 2845
Bsp1407I TGTACA 1 cut(s) 3746
Bsp1720I GCTNAGC 2 cut(s) 1881, 3284
Bsp19I CCATGG 1 cut(s) 2157
BspACI CCGC 3 cut(s) 5, 113, 4073
BspCNI CTCAG 5 cut(s) 34, 1873, 2254, 2647, 3314
BspDI ATCGAT 2 cut(s) 485, 4028
BspFNI CGCG 3 cut(s) 1807, 2302, 3978
BspHI TCATGA 2 cut(s) 691, 3760
BspLI GGNNCC 9 cut(s) 1746, 2008, 2152, 2174, 2581, 2844, 3151, 3837, 3995
BspMAI CTGCAG 1 cut(s) 1174
BspMI ACCTGC 1 cut(s) 662
BspOI GCTAGC 1 cut(s) 3434
BspQI GCTCTTC 1 cut(s) 2717
BspT104I TTCGAA 1 cut(s) 2675
BspT107I GGYRCC 2 cut(s) 2172, 2842
BspTI CTTAAG 1 cut(s) 2771
BspTNI GGTCTC 4 cut(s) 1082, 1151, 1801, 4248
BsrDI GCAATG 3 cut(s) 69, 117, 1124
BsrFI RCCGGY 1 cut(s) 3517
BsrGI TGTACA 1 cut(s) 3746
BsrI ACTGG 3 cut(s) 3421, 3661, 3944
BssAI RCCGGY 1 cut(s) 3517
BssECI CCNNGG 6 cut(s) 1681, 1791, 1935, 2157, 2631, 3601
BssHII GCGCGC 1 cut(s) 3976
BssNAI GTATAC 1 cut(s) 2129
BssSI CACGAG 1 cut(s) 3011
BssT1I CCWWGG 3 cut(s) 1791, 1935, 2157
Bst1107I GTATAC 1 cut(s) 2129
Bst2BI CACGAG 1 cut(s) 3011
Bst2UI CCWGG 5 cut(s) 552, 1151, 1230, 1682, 1974
Bst4CI ACNGT 8 cut(s) 605, 1384, 1599, 2422, 4093, 4102, 4123, 4215
Bst6I CTCTTC 3 cut(s) 2717, 3894, 3983
BstAFI CTTAAG 1 cut(s) 2771
BstAPI GCANNNNNTGC 1 cut(s) 2360
BstAUI TGTACA 1 cut(s) 3746
BstBI TTCGAA 1 cut(s) 2675
BstDSI CCRYGG 2 cut(s) 2157, 3601
BstF5I GGATG 7 cut(s) 344, 1264, 2344, 2795, 3369, 3786, 4018
BstFNI CGCG 3 cut(s) 1807, 2302, 3978
BstH2I RGCGCY 1 cut(s) 3291
BstHHI GCGC 6 cut(s) 1809, 2289, 2302, 3290, 3978, 3980
BstMAI GTCTC 7 cut(s) 1082, 1151, 1331, 1526, 1801, 2174, 4248
BstMCI CGRYCG 2 cut(s) 297, 3518
BstNI CCWGG 5 cut(s) 552, 1151, 1230, 1682, 1974
BstNSI RCATGY 2 cut(s) 3430, 3475
BstSCI CCNGG 7 cut(s) 550, 1149, 1228, 1680, 1972, 2455, 2838
BstSFI CTRYAG 2 cut(s) 1170, 3450
BstSLI GKGCMC 2 cut(s) 2308, 2845
BstUI CGCG 3 cut(s) 1807, 2302, 3978
BstV2I GAAGAC 2 cut(s) 2423, 2475
BstX2I RGATCY 7 cut(s) 1509, 2150, 2209, 2217, 2233, 2804, 3796
BstXI CCANNNNNNTGG 1 cut(s) 3202
BstYI RGATCY 7 cut(s) 1509, 2150, 2209, 2217, 2233, 2804, 3796
BstZ17I GTATAC 1 cut(s) 2129
Bsu15I ATCGAT 2 cut(s) 485, 4028
BsuI GTATCC 2 cut(s) 2874, 4107
BsuTUI ATCGAT 2 cut(s) 485, 4028
BtgI CCRYGG 2 cut(s) 2157, 3601
BtrI CACGTC 1 cut(s) 1671
BtsCI GGATG 7 cut(s) 344, 1264, 2344, 2795, 3369, 3786, 4018
BtsI GCAGTG 3 cut(s) 598, 1695, 2571
BveI ACCTGC 1 cut(s) 662
CciI TCATGA 2 cut(s) 691, 3760
CfoI GCGC 6 cut(s) 1809, 2289, 2302, 3290, 3978, 3980
Cfr10I RCCGGY 1 cut(s) 3517
Cfr13I GGNCC 6 cut(s) 18, 995, 1305, 2507, 3835, 4105
ClaI ATCGAT 2 cut(s) 485, 4028
CseI GACGC 3 cut(s) 183, 2191, 3060
Csp6I GTAC 4 cut(s) 841, 1595, 2173, 3747
CspCI CAANNNNNGTGG 2 cut(s) 2251, 2286
CviQI GTAC 4 cut(s) 841, 1595, 2173, 3747
DraI TTTAAA 1 cut(s) 2934
DriI GACNNNNNGTC 2 cut(s) 993, 1074
EaeI YGGCCR 4 cut(s) 237, 2275, 3005, 3649
Eam1104I CTCTTC 3 cut(s) 2717, 3894, 3983
Eam1105I GACNNNNNGTC 2 cut(s) 993, 1074
EarI CTCTTC 3 cut(s) 2717, 3894, 3983
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 2 cut(s) 2405, 2710
Eco130I CCWWGG 3 cut(s) 1791, 1935, 2157
Eco24I GRGCYC 2 cut(s) 2407, 2712
Eco31I GGTCTC 4 cut(s) 1082, 1151, 1801, 4248
Eco32I GATATC 4 cut(s) 130, 667, 802, 1167
Eco47I GGWCC 5 cut(s) 18, 995, 1305, 2507, 3835
Eco53kI GAGCTC 2 cut(s) 2405, 2710
Eco57I CTGAAG 6 cut(s) 419, 1111, 1301, 1496, 2469, 2666
EcoICRI GAGCTC 2 cut(s) 2405, 2710
EcoO109I RGGNCCY 1 cut(s) 2507
EcoRI GAATTC 2 cut(s) 3206, 4076
EcoRII CCWGG 5 cut(s) 550, 1149, 1228, 1680, 1972
EcoRV GATATC 4 cut(s) 130, 667, 802, 1167
EcoT14I CCWWGG 3 cut(s) 1791, 1935, 2157
EcoT22I ATGCAT 1 cut(s) 4269
EcoT38I GRGCYC 2 cut(s) 2407, 2712
ErhI CCWWGG 3 cut(s) 1791, 1935, 2157
Esp3I CGTCTC 1 cut(s) 2174
FalI AAGNNNNNCTT 6 cut(s) 486, 518, 1974, 2006, 2169, 2201
FaqI GGGAC 3 cut(s) 1934, 2968, 3963
FauNDI CATATG 2 cut(s) 2092, 3376
FbaI TGATCA 2 cut(s) 823, 2730
FblI GTMKAC 3 cut(s) 2128, 2445, 4083
FokI GGATG 7 cut(s) 351, 1271, 2351, 2802, 3376, 3773, 4025
FriOI GRGCYC 2 cut(s) 2407, 2712
GlaI GCGC 6 cut(s) 1808, 2288, 2301, 3289, 3977, 3979
GsaI CCCAGC 3 cut(s) 383, 653, 3486
GsuI CTGGAG 4 cut(s) 1133, 3168, 3961, 4040
HaeII RGCGCY 1 cut(s) 3291
HapII CCGG 5 cut(s) 2010, 2456, 2839, 3518, 3652
HgaI GACGC 3 cut(s) 183, 2191, 3060
HhaI GCGC 6 cut(s) 1809, 2289, 2302, 3290, 3978, 3980
Hin6I GCGC 6 cut(s) 1807, 2287, 2300, 3288, 3976, 3978
HinP1I GCGC 6 cut(s) 1807, 2287, 2300, 3288, 3976, 3978
HincII GTYRAC 2 cut(s) 625, 2446
HindII GTYRAC 2 cut(s) 625, 2446
HpaII CCGG 5 cut(s) 2010, 2456, 2839, 3518, 3652
HphI GGTGA 5 cut(s) 617, 686, 1064, 1244, 1286
HpyCH4III ACNGT 8 cut(s) 605, 1384, 1599, 2422, 4093, 4102, 4123, 4215
HpyCH4IV ACGT 3 cut(s) 1670, 3271, 3775
HpySE526I ACGT 3 cut(s) 1670, 3271, 3775
HspAI GCGC 6 cut(s) 1807, 2287, 2300, 3288, 3976, 3978
KpnI GGTACC 1 cut(s) 2176
Ksp22I TGATCA 2 cut(s) 823, 2730
LguI GCTCTTC 1 cut(s) 2717
LmnI GCTCC 8 cut(s) 856, 1744, 2012, 2402, 2795, 3149, 3942, 3993
MaeII ACGT 3 cut(s) 1670, 3271, 3775
MaeIII GTNAC 7 cut(s) 187, 700, 1599, 1657, 2431, 3154, 3873
MfeI CAATTG 3 cut(s) 228, 3526, 3750
MflI RGATCY 7 cut(s) 1509, 2150, 2209, 2217, 2233, 2804, 3796
MhlI GDGCHC 5 cut(s) 1389, 2308, 2407, 2712, 2845
MlsI TGGCCA 2 cut(s) 2277, 3007
MluNI TGGCCA 2 cut(s) 2277, 3007
MmeI TCCRAC 5 cut(s) 62, 1089, 1336, 1818, 3824
Mox20I TGGCCA 2 cut(s) 2277, 3007
Mph1103I ATGCAT 1 cut(s) 4269
MroXI GAANNNNTTC 1 cut(s) 2139
MscI TGGCCA 2 cut(s) 2277, 3007
MslI CAYNNNNRTG 3 cut(s) 696, 745, 4139
Msp20I TGGCCA 2 cut(s) 2277, 3007
MspA1I CMGCKG 2 cut(s) 811, 1073
MspCI CTTAAG 1 cut(s) 2771
MspI CCGG 5 cut(s) 2010, 2456, 2839, 3518, 3652
MspR9I CCNGG 7 cut(s) 552, 1151, 1230, 1682, 1974, 2457, 2840
MunI CAATTG 3 cut(s) 228, 3526, 3750
Mva1269I GAATGC 4 cut(s) 62, 1885, 2289, 4267
MvaI CCWGG 5 cut(s) 552, 1151, 1230, 1682, 1974
MvnI CGCG 3 cut(s) 1807, 2302, 3978
NciI CCSGG 2 cut(s) 2457, 2840
NcoI CCATGG 1 cut(s) 2157
NdeI CATATG 2 cut(s) 2092, 3376
NheI GCTAGC 1 cut(s) 3430
NlaIV GGNNCC 9 cut(s) 1746, 2008, 2152, 2174, 2581, 2844, 3151, 3837, 3995
NmeAIII GCCGAG 1 cut(s) 2656
NmuCI GTSAC 2 cut(s) 2431, 3154
NsiI ATGCAT 1 cut(s) 4269
NspI RCATGY 2 cut(s) 3430, 3475
NspV TTCGAA 1 cut(s) 2675
OliI CACNNNNGTG 1 cut(s) 4139
PaeI GCATGC 1 cut(s) 3430
PagI TCATGA 2 cut(s) 691, 3760
PaqCI CACCTGC 1 cut(s) 662
PauI GCGCGC 1 cut(s) 3976
PciSI GCTCTTC 1 cut(s) 2717
PctI GAATGC 4 cut(s) 62, 1885, 2289, 4267
PdmI GAANNNNTTC 1 cut(s) 2139
PflFI GACNNNGTC 2 cut(s) 2552, 3109
PfoI TCCNGGA 1 cut(s) 550
Ple19I CGATCG 1 cut(s) 297
PpuMI RGGWCCY 1 cut(s) 2507
PshBI ATTAAT 2 cut(s) 761, 947
PsiI TTATAA 2 cut(s) 2691, 4097
Psp124BI GAGCTC 2 cut(s) 2407, 2712
Psp5II RGGWCCY 1 cut(s) 2507
Psp6I CCWGG 5 cut(s) 550, 1149, 1228, 1680, 1972
PspFI CCCAGC 3 cut(s) 379, 649, 3482
PspGI CCWGG 5 cut(s) 550, 1149, 1228, 1680, 1972
PspN4I GGNNCC 9 cut(s) 1746, 2008, 2152, 2174, 2581, 2844, 3151, 3837, 3995
PspPI GGNCC 6 cut(s) 18, 995, 1305, 2507, 3835, 4105
PspPPI RGGWCCY 1 cut(s) 2507
PstI CTGCAG 1 cut(s) 1174
PsuI RGATCY 7 cut(s) 1509, 2150, 2209, 2217, 2233, 2804, 3796
PsyI GACNNNGTC 2 cut(s) 2552, 3109
PteI GCGCGC 1 cut(s) 3976
PvuI CGATCG 1 cut(s) 297
PvuII CAGCTG 2 cut(s) 811, 1073
RsaI GTAC 4 cut(s) 842, 1596, 2174, 3748
RsaNI GTAC 4 cut(s) 841, 1595, 2173, 3747
RseI CAYNNNNRTG 3 cut(s) 696, 745, 4139
SacI GAGCTC 2 cut(s) 2407, 2712
SalI GTCGAC 1 cut(s) 2444
SapI GCTCTTC 1 cut(s) 2717
Sau96I GGNCC 6 cut(s) 18, 995, 1305, 2507, 3835, 4105
ScaI AGTACT 1 cut(s) 1596
ScrFI CCNGG 7 cut(s) 552, 1151, 1230, 1682, 1974, 2457, 2840
SduI GDGCHC 5 cut(s) 1389, 2308, 2407, 2712, 2845
SfcI CTRYAG 2 cut(s) 1170, 3450
SfuI TTCGAA 1 cut(s) 2675
SinI GGWCC 5 cut(s) 18, 995, 1305, 2507, 3835
SmiMI CAYNNNNRTG 3 cut(s) 696, 745, 4139
SmlI CTYRAG 2 cut(s) 788, 2771
SmoI CTYRAG 2 cut(s) 788, 2771
SpeI ACTAGT 2 cut(s) 989, 4003
SphI GCATGC 1 cut(s) 3430
SsiI CCGC 3 cut(s) 5, 113, 4073
SspI AATATT 4 cut(s) 109, 1867, 2140, 4238
SstI GAGCTC 2 cut(s) 2407, 2712
StyD4I CCNGG 7 cut(s) 550, 1149, 1228, 1680, 1972, 2455, 2838
StyI CCWWGG 3 cut(s) 1791, 1935, 2157
TaaI ACNGT 8 cut(s) 605, 1384, 1599, 2422, 4093, 4102, 4123, 4215
TaiI ACGT 3 cut(s) 1673, 3274, 3778
TaqI TCGA 7 cut(s) 297, 485, 2445, 2675, 2706, 2890, 4028
TatI WGTACW 3 cut(s) 840, 1594, 3746
TseFI GTSAC 2 cut(s) 2431, 3154
Tsp45I GTSAC 2 cut(s) 2431, 3154
TspGWI ACGGA 2 cut(s) 847, 869
Tth111I GACNNNGTC 2 cut(s) 2552, 3109
Vha464I CTTAAG 1 cut(s) 2771
VpaK11BI GGWCC 5 cut(s) 18, 995, 1305, 2507, 3835
VspI ATTAAT 2 cut(s) 761, 947
XapI RAATTY 9 cut(s) 1277, 1537, 1911, 2493, 3206, 3220, 3436, 3583, 4076
XbaI TCTAGA 3 cut(s) 2212, 2899, 3274
XceI RCATGY 2 cut(s) 3430, 3475
XcmI CCANNNNNNNNNTGG 1 cut(s) 2789
XmiI GTMKAC 3 cut(s) 2128, 2445, 4083
XmnI GAANNNNTTC 1 cut(s) 2139
ZrmI AGTACT 1 cut(s) 1596
Zsp2I ATGCAT 1 cut(s) 4269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.