Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003426.1

Orthogroup ID

OG0005943

Physical Location & Seq

Genomic Coordinates Reverse (-)

67796 .. 71540

Gene Structure 3745 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003426.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1197 bp

atgtccaataggatttccagacgtgcttcccaagtagtcaagaccttctgccggaaggggtccaagtgggacgctcgctctcttgatacttttgatctccttttcttcggggttcgatatgtggattggctgaccttcgatgacggctttgtttctatgatcgatggtgatggcgaggttccagccttgatgtttaccatggtcggggctgcagcggacgtcggtgatagtagtggccaagtgctgaggccaaatctaagcccaattgatgggcttgaagtggtgcaatctcgagacctgtggaagatctggttttgggacccaggtattagtgatctgcatctctgctatgctagattttggtggtttatccgtcatcgggagagtagtctccgaccatattcaaggacaaggaggagaagttggggcttgggtcgttgggccttagttcaaatgtggtgggctattcaattgcaggttcaaggcagtggactggtggcttgggattgtttttggcctactgcatttcgtgacccttttgatcttacattcgtgggaggctctctgcaatttactagtatttttgtacaccaattgaggtctctaggcaaacttactacccgtcgccgaagccctgcatacttgacaccggcgctggtcctgctcaccgtcccagtcagcgacgactctcctcctccgccgcagtccatggcttgccctggatctcaacctcgatcacctcctctctcccagcgctccgaccttgacaatcacctctccaatctccagaaatcctcccaggtcctcgacattgtcaagtccgacgccaaccacgtcctctccaacgtctcatccacctgcgacctcgctgaccacgtcagcgccaagatccgcgacctctccaatctccagaaatcctcccaggtcctcgacatcgtcaagtccgacgccgaccacgtcctctccaacgtctcatccacctgcaacctcgccgatcacgtcagcggcaaggttcacgagctcgacctctcccagtcccgtgtcaactccacgctcctccgtttggatgcgattgtgaagcacgacctcacccaacgtcggaatccagtcaccagtcctgtagccggattccggttatcggtcgcgggagacagcagctggccactgatcaccggagcacagcaaggtggaggatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000301 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006139 GO:0006725 GO:0006807 GO:0006810 GO:0006890 GO:0006891 GO:0006996 GO:0007030 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010256 GO:0012505 GO:0016043 GO:0016070 GO:0016192 GO:0016787 GO:0016788 GO:0017119 GO:0022607 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048193 GO:0048213 GO:0051179 GO:0051234 GO:0065003 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0099023 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COG4 PPR PPR_2 RINT1_TIP1

Protein Analysis

398

Amino Acids

44.33

Weight (kDa)

8.75

Isoelectric Point (pI)

59.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005943)

Species	Orthologous Gene IDs
rosa_laevigata	RLG00000004219 RLG00000005084 RLG00000010195 RLG00000013467 RLG00000014305 RLG00000028980 RLG00000030839 RLG00000032541
rosa_multiflora	Rmu_co8333173.1_g000001 Rmu_sc0001609.1_g000028 Rmu_sc0003426.1_g000014 Rmu_sc0010981.1_g000007 Rmu_sc0019815.1_g000001 Rmu_sc0023018.1_g000001 Rmu_ssc0000323.1_g000018
rosa_roxburghii	Rroxscaffold_1G00008410 Rroxscaffold_4G00294860 Rroxscaffold_5G00373940
rosa_samantha	Rh2BG307500 Rh2CG285600 Rh3CG238400 Rh4CG114700 Rh5DG479400 Rh5DG522500 Rh6CG228800 Rh6DG235200 Rh7AG303100 Rh7CG263200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	866, 989
AatII	GACGTC	1 cut(s)	222
Acc36I	ACCTGC	3 cut(s)	466, 866, 989
AccB7I	CCANNNNNTGG	1 cut(s)	269
AccII	CGCG	2 cut(s)	894, 1145
AciI	CCGC	6 cut(s)	215, 698, 701, 892, 1005, 1145
AclWI	GGATC	2 cut(s)	730, 883
AcoI	YGGCCR	2 cut(s)	235, 1160
AcyI	GRCGYC	3 cut(s)	219, 825, 948
AfaI	GTAC	1 cut(s)	588
AfeI	AGCGCT	1 cut(s)	755
AfiI	CCNNNNNNNGG	9 cut(s)	51, 204, 269, 379, 1063, 1098, 1124, 1131, 1138
AgsI	TTSAA	5 cut(s)	278, 405, 452, 470, 482
AhlI	ACTAGT	1 cut(s)	575
AjiI	CACGTC	5 cut(s)	23, 835, 877, 958, 1000
AjnI	CCWGG	4 cut(s)	322, 718, 798, 921
AluBI	AGCT	2 cut(s)	1021, 1158
AluI	AGCT	2 cut(s)	1021, 1158
Alw21I	GWGCWC	2 cut(s)	1023, 1180
Alw26I	GTCTC	6 cut(s)	288, 395, 606, 853, 976, 1143
AlwI	GGATC	2 cut(s)	730, 883
AlwNI	CAGNNNCTG	1 cut(s)	1158
Ama87I	CYCGRG	1 cut(s)	291
Aor51HI	AGCGCT	1 cut(s)	755
AoxI	GGCC	5 cut(s)	235, 248, 441, 515, 1160
ApeKI	GCWGC	3 cut(s)	209, 212, 1155
AspLEI	GCGC	3 cut(s)	655, 756, 884
AspS9I	GGNCC	6 cut(s)	60, 319, 441, 658, 802, 925
AsuHPI	GGTGA	8 cut(s)	179, 236, 658, 729, 764, 1081, 1102, 1162
AvaI	CYCGRG	1 cut(s)	291
AvaII	GGWCC	5 cut(s)	60, 319, 658, 802, 925
BalI	TGGCCA	2 cut(s)	237, 1162
BanII	GRGCYC	1 cut(s)	1023
BauI	CACGAG	1 cut(s)	1016
Bbv12I	GWGCWC	2 cut(s)	1023, 1180
BbvCI	CCTCAGC	1 cut(s)	245
BbvI	GCAGC	3 cut(s)	196, 224, 1167
BccI	CCATC	3 cut(s)	158, 164, 263
BceAI	ACGGC	1 cut(s)	160
BciT130I	CCWGG	4 cut(s)	324, 720, 800, 923
BclI	TGATCA	1 cut(s)	1167
BcoDI	GTCTC	6 cut(s)	288, 395, 606, 853, 976, 1143
BcuI	ACTAGT	1 cut(s)	575
BfaI	CTAG	3 cut(s)	354, 576, 605
BfmI	CTRYAG	2 cut(s)	210, 1119
BfoI	RGCGCY	3 cut(s)	656, 757, 885
BfuAI	ACCTGC	3 cut(s)	466, 866, 989
BglII	AGATCT	1 cut(s)	306
BisI	GCNGC	5 cut(s)	210, 213, 701, 1006, 1156
BlsI	GCNGC	5 cut(s)	211, 214, 702, 1007, 1157
Bme1390I	CCNGG	4 cut(s)	324, 720, 800, 923
Bme18I	GGWCC	5 cut(s)	60, 319, 658, 802, 925
BmeT110I	CYCGRG	1 cut(s)	291
BmgBI	CACGTC	5 cut(s)	23, 835, 877, 958, 1000
BmgT120I	GGNCC	6 cut(s)	60, 319, 441, 658, 802, 925
BmiI	GGNNCC	4 cut(s)	61, 180, 320, 321
BmrFI	CCNGG	4 cut(s)	324, 720, 800, 923
BmrI	ACTGGG	2 cut(s)	668, 1027
BmsI	GCATC	2 cut(s)	349, 1057
BmuI	ACTGGG	2 cut(s)	668, 1027
BpmI	CTGGAG	2 cut(s)	770, 893
Bpu10I	CCTNAGC	1 cut(s)	245
Bsa29I	ATCGAT	1 cut(s)	162
BsaBI	GATNNNNATC	1 cut(s)	339
BsaHI	GRCGYC	3 cut(s)	219, 825, 948
BsaI	GGTCTC	2 cut(s)	288, 606
BsaJI	CCNNGG	6 cut(s)	198, 322, 708, 718, 798, 921
BsaWI	WCCGGW	2 cut(s)	1131, 1172
BsaXI	ACNNNNNCTCC	6 cut(s)	406, 436, 824, 854, 947, 977
Bsc4I	CCNNNNNNNGG	9 cut(s)	51, 204, 269, 379, 1063, 1098, 1124, 1131, 1138
Bse118I	RCCGGY	1 cut(s)	649
Bse1I	ACTGG	5 cut(s)	498, 674, 1033, 1106, 1113
Bse8I	GATNNNNATC	1 cut(s)	339
BseBI	CCWGG	4 cut(s)	324, 720, 800, 923
BseCI	ATCGAT	1 cut(s)	162
BseDI	CCNNGG	6 cut(s)	198, 322, 708, 718, 798, 921
BseGI	GGATG	3 cut(s)	851, 974, 1072
BseJI	GATNNNNATC	1 cut(s)	339
BseLI	CCNNNNNNNGG	9 cut(s)	51, 204, 269, 379, 1063, 1098, 1124, 1131, 1138
BseMII	CTCAG	1 cut(s)	236
BseNI	ACTGG	5 cut(s)	498, 674, 1033, 1106, 1113
BseRI	GAGGAG	5 cut(s)	430, 681, 684, 732, 1046
BseXI	GCAGC	3 cut(s)	196, 224, 1167
BseYI	CCCAGC	1 cut(s)	750
Bsh1236I	CGCG	2 cut(s)	894, 1145
Bsh1285I	CGRYCG	1 cut(s)	1143
BshFI	GGCC	5 cut(s)	237, 250, 443, 517, 1162
BshVI	ATCGAT	1 cut(s)	162
BsiEI	CGRYCG	1 cut(s)	1143
BsiHKAI	GWGCWC	2 cut(s)	1023, 1180
BsiHKCI	CYCGRG	1 cut(s)	291
BsiSI	CCGG	5 cut(s)	52, 650, 1125, 1132, 1173
BslFI	GGGAC	4 cut(s)	83, 332, 656, 1021
BslI	CCNNNNNNNGG	9 cut(s)	51, 204, 269, 379, 1063, 1098, 1124, 1131, 1138
BsmAI	GTCTC	6 cut(s)	288, 395, 606, 853, 976, 1143
BsmBI	CGTCTC	2 cut(s)	853, 976
BsmFI	GGGAC	4 cut(s)	83, 332, 656, 1021
BsnI	GGCC	5 cut(s)	237, 250, 443, 517, 1162
Bso31I	GGTCTC	2 cut(s)	288, 606
BsoBI	CYCGRG	1 cut(s)	291
Bsp1286I	GDGCHC	2 cut(s)	1023, 1180
Bsp1407I	TGTACA	1 cut(s)	586
Bsp19I	CCATGG	2 cut(s)	198, 708
BspACI	CCGC	6 cut(s)	215, 698, 701, 892, 1005, 1145
BspANI	GGCC	5 cut(s)	237, 250, 443, 517, 1162
BspCNI	CTCAG	1 cut(s)	237
BspDI	ATCGAT	1 cut(s)	162
BspFNI	CGCG	2 cut(s)	894, 1145
BspLI	GGNNCC	4 cut(s)	61, 180, 320, 321
BspMAI	CTGCAG	1 cut(s)	214
BspMI	ACCTGC	3 cut(s)	466, 866, 989
BspPI	GGATC	2 cut(s)	730, 883
BspTNI	GGTCTC	2 cut(s)	288, 606
BsrFI	RCCGGY	1 cut(s)	649
BsrGI	TGTACA	1 cut(s)	586
BsrI	ACTGG	5 cut(s)	498, 674, 1033, 1106, 1113
BssAI	RCCGGY	1 cut(s)	649
BssECI	CCNNGG	6 cut(s)	198, 322, 708, 718, 798, 921
BssNI	GRCGYC	3 cut(s)	219, 825, 948
BssSI	CACGAG	1 cut(s)	1016
BssT1I	CCWWGG	2 cut(s)	198, 708
Bst2BI	CACGAG	1 cut(s)	1016
Bst2UI	CCWGG	4 cut(s)	324, 720, 800, 923
Bst4CI	ACNGT	1 cut(s)	670
BstACI	GRCGYC	3 cut(s)	219, 825, 948
BstAUI	TGTACA	1 cut(s)	586
BstC8I	GCNNGC	3 cut(s)	76, 715, 1160
BstDEI	CTNAG	3 cut(s)	245, 257, 445
BstDSI	CCRYGG	2 cut(s)	198, 708
BstF5I	GGATG	3 cut(s)	851, 974, 1072
BstFNI	CGCG	2 cut(s)	894, 1145
BstH2I	RGCGCY	3 cut(s)	656, 757, 885
BstHHI	GCGC	3 cut(s)	655, 756, 884
BstMAI	GTCTC	6 cut(s)	288, 395, 606, 853, 976, 1143
BstMCI	CGRYCG	1 cut(s)	1143
BstMWI	GCNNNNNNNGC	1 cut(s)	661
BstNI	CCWGG	4 cut(s)	324, 720, 800, 923
BstSCI	CCNGG	4 cut(s)	322, 718, 798, 921
BstSFI	CTRYAG	2 cut(s)	210, 1119
BstUI	CGCG	2 cut(s)	894, 1145
BstV1I	GCAGC	3 cut(s)	196, 224, 1167
BstX2I	RGATCY	3 cut(s)	306, 722, 888
BstYI	RGATCY	3 cut(s)	306, 722, 888
Bsu15I	ATCGAT	1 cut(s)	162
BsuRI	GGCC	5 cut(s)	237, 250, 443, 517, 1162
BsuTUI	ATCGAT	1 cut(s)	162
BtgI	CCRYGG	2 cut(s)	198, 708
BtrI	CACGTC	5 cut(s)	23, 835, 877, 958, 1000
BtsCI	GGATG	3 cut(s)	851, 974, 1072
BtsI	GCAGTG	1 cut(s)	493
BtsIMutI	CAGTG	2 cut(s)	493, 1163
BveI	ACCTGC	3 cut(s)	466, 866, 989
Cac8I	GCNNGC	3 cut(s)	76, 715, 1160
CaiI	CAGNNNCTG	1 cut(s)	1158
CfoI	GCGC	3 cut(s)	655, 756, 884
Cfr10I	RCCGGY	1 cut(s)	649
Cfr13I	GGNCC	6 cut(s)	60, 319, 441, 658, 802, 925
ClaI	ATCGAT	1 cut(s)	162
CseI	GACGC	3 cut(s)	80, 833, 956
Csp6I	GTAC	1 cut(s)	587
CspCI	CAANNNNNGTGG	2 cut(s)	440, 475
CviAII	CATG	2 cut(s)	199, 709
CviQI	GTAC	1 cut(s)	587
DdeI	CTNAG	3 cut(s)	245, 257, 445
EaeI	YGGCCR	2 cut(s)	235, 1160
EciI	GGCGGA	1 cut(s)	687
Ecl136II	GAGCTC	1 cut(s)	1021
Eco130I	CCWWGG	2 cut(s)	198, 708
Eco24I	GRGCYC	1 cut(s)	1023
Eco31I	GGTCTC	2 cut(s)	288, 606
Eco47I	GGWCC	5 cut(s)	60, 319, 658, 802, 925
Eco47III	AGCGCT	1 cut(s)	755
Eco53kI	GAGCTC	1 cut(s)	1021
Eco88I	CYCGRG	1 cut(s)	291
EcoICRI	GAGCTC	1 cut(s)	1021
EcoO109I	RGGNCCY	3 cut(s)	319, 802, 925
EcoRII	CCWGG	4 cut(s)	322, 718, 798, 921
EcoT14I	CCWWGG	2 cut(s)	198, 708
EcoT38I	GRGCYC	1 cut(s)	1023
ErhI	CCWWGG	2 cut(s)	198, 708
Esp3I	CGTCTC	2 cut(s)	853, 976
FaeI	CATG	2 cut(s)	202, 712
FaiI	YATR	7 cut(s)	120, 158, 200, 351, 400, 640, 710
FaqI	GGGAC	4 cut(s)	83, 332, 656, 1021
FatI	CATG	2 cut(s)	198, 708
FauI	CCCGC	1 cut(s)	1138
FbaI	TGATCA	1 cut(s)	1167
Fnu4HI	GCNGC	5 cut(s)	210, 213, 701, 1006, 1156
FokI	GGATG	3 cut(s)	838, 961, 1079
FriOI	GRGCYC	1 cut(s)	1023
Fsp4HI	GCNGC	5 cut(s)	210, 213, 701, 1006, 1156
FspBI	CTAG	3 cut(s)	354, 576, 605
GlaI	GCGC	3 cut(s)	654, 755, 883
GluI	GCNGC	5 cut(s)	210, 213, 701, 1006, 1156
GsaI	CCCAGC	1 cut(s)	754
GsuI	CTGGAG	2 cut(s)	770, 893
HaeII	RGCGCY	3 cut(s)	656, 757, 885
HaeIII	GGCC	5 cut(s)	237, 250, 443, 517, 1162
HapII	CCGG	5 cut(s)	52, 650, 1125, 1132, 1173
HgaI	GACGC	3 cut(s)	80, 833, 956
HhaI	GCGC	3 cut(s)	655, 756, 884
Hin1I	GRCGYC	3 cut(s)	219, 825, 948
Hin1II	CATG	2 cut(s)	202, 712
Hin6I	GCGC	3 cut(s)	653, 754, 882
HinP1I	GCGC	3 cut(s)	653, 754, 882
HincII	GTYRAC	1 cut(s)	1045
HindII	GTYRAC	1 cut(s)	1045
HinfI	GANTC	3 cut(s)	686, 1102, 1128
HpaII	CCGG	5 cut(s)	52, 650, 1125, 1132, 1173
HphI	GGTGA	8 cut(s)	179, 236, 658, 729, 764, 1081, 1102, 1162
Hpy166II	GTNNAC	5 cut(s)	195, 491, 589, 1015, 1045
Hpy188I	TCNGA	5 cut(s)	395, 760, 823, 946, 1101
Hpy8I	GTNNAC	5 cut(s)	195, 491, 589, 1015, 1045
Hpy99I	CGWCG	6 cut(s)	224, 627, 686, 827, 950, 1101
HpyAV	CCTTC	3 cut(s)	49, 55, 145
HpyCH4III	ACNGT	1 cut(s)	670
HpyCH4IV	ACGT	9 cut(s)	22, 219, 834, 846, 876, 957, 969, 999, 1096
HpyCH4V	TGCA	8 cut(s)	212, 286, 340, 475, 524, 568, 638, 984
HpyF10VI	GCNNNNNNNGC	1 cut(s)	661
HpyF3I	CTNAG	3 cut(s)	245, 257, 445
HpySE526I	ACGT	9 cut(s)	22, 219, 834, 846, 876, 957, 969, 999, 1096
Hsp92I	GRCGYC	3 cut(s)	219, 825, 948
Hsp92II	CATG	2 cut(s)	202, 712
HspAI	GCGC	3 cut(s)	653, 754, 882
KflI	GGGWCCC	1 cut(s)	319
Ksp22I	TGATCA	1 cut(s)	1167
LmnI	GCTCC	3 cut(s)	761, 1059, 1175
Lsp1109I	GCAGC	3 cut(s)	196, 224, 1167
LweI	GCATC	2 cut(s)	349, 1057
MaeI	CTAG	3 cut(s)	354, 576, 605
MaeII	ACGT	9 cut(s)	22, 219, 834, 846, 876, 957, 969, 999, 1096
MaeIII	GTNAC	2 cut(s)	530, 1108
MboII	GAAGA	2 cut(s)	97, 316
MfeI	CAATTG	3 cut(s)	264, 470, 593
MflI	RGATCY	3 cut(s)	306, 722, 888
MhlI	GDGCHC	2 cut(s)	1023, 1180
MlsI	TGGCCA	2 cut(s)	237, 1162
MluCI	AATT	4 cut(s)	264, 470, 569, 593
MluNI	TGGCCA	2 cut(s)	237, 1162
MlyI	GAGTC	1 cut(s)	680
MmeI	TCCRAC	7 cut(s)	418, 783, 846, 867, 969, 990, 1079
Mox20I	TGGCCA	2 cut(s)	237, 1162
MscI	TGGCCA	2 cut(s)	237, 1162
Msp20I	TGGCCA	2 cut(s)	237, 1162
MspA1I	CMGCKG	3 cut(s)	215, 1005, 1158
MspI	CCGG	5 cut(s)	52, 650, 1125, 1132, 1173
MspR9I	CCNGG	4 cut(s)	324, 720, 800, 923
MunI	CAATTG	3 cut(s)	264, 470, 593
MvaI	CCWGG	4 cut(s)	324, 720, 800, 923
MvnI	CGCG	2 cut(s)	894, 1145
MwoI	GCNNNNNNNGC	1 cut(s)	661
NcoI	CCATGG	2 cut(s)	198, 708
NlaIII	CATG	2 cut(s)	202, 712
NlaIV	GGNNCC	4 cut(s)	61, 180, 320, 321
NmuCI	GTSAC	2 cut(s)	530, 1108
PaeR7I	CTCGAG	1 cut(s)	291
PaqCI	CACCTGC	2 cut(s)	866, 989
PcsI	WCGNNNNNNNCGW	5 cut(s)	831, 873, 942, 954, 996
PfeI	GAWTC	2 cut(s)	1102, 1128
PflFI	GACNNNGTC	4 cut(s)	812, 875, 935, 956
PflMI	CCANNNNNTGG	1 cut(s)	269
PkrI	GCNGC	5 cut(s)	211, 214, 702, 1007, 1157
PleI	GAGTC	1 cut(s)	680
PpsI	GAGTC	1 cut(s)	680
PpuMI	RGGWCCY	3 cut(s)	319, 802, 925
Psp124BI	GAGCTC	1 cut(s)	1023
Psp5II	RGGWCCY	3 cut(s)	319, 802, 925
Psp6I	CCWGG	4 cut(s)	322, 718, 798, 921
PspFI	CCCAGC	1 cut(s)	750
PspGI	CCWGG	4 cut(s)	322, 718, 798, 921
PspN4I	GGNNCC	4 cut(s)	61, 180, 320, 321
PspPI	GGNCC	6 cut(s)	60, 319, 441, 658, 802, 925
PspPPI	RGGWCCY	3 cut(s)	319, 802, 925
PstI	CTGCAG	1 cut(s)	214
PstNI	CAGNNNCTG	1 cut(s)	1158
PsuI	RGATCY	3 cut(s)	306, 722, 888
PsyI	GACNNNGTC	4 cut(s)	812, 875, 935, 956
PvuII	CAGCTG	1 cut(s)	1158
RsaI	GTAC	1 cut(s)	588
RsaNI	GTAC	1 cut(s)	587
SacI	GAGCTC	1 cut(s)	1023
SatI	GCNGC	5 cut(s)	210, 213, 701, 1006, 1156
Sau96I	GGNCC	6 cut(s)	60, 319, 441, 658, 802, 925
SchI	GAGTC	1 cut(s)	680
ScrFI	CCNGG	4 cut(s)	324, 720, 800, 923
SduI	GDGCHC	2 cut(s)	1023, 1180
SfaNI	GCATC	2 cut(s)	349, 1057
SfcI	CTRYAG	2 cut(s)	210, 1119
Sfr274I	CTCGAG	1 cut(s)	291
SgrAI	CRCCGGYG	1 cut(s)	649
SinI	GGWCC	5 cut(s)	60, 319, 658, 802, 925
SlaI	CTCGAG	1 cut(s)	291
SmlI	CTYRAG	1 cut(s)	291
SmoI	CTYRAG	1 cut(s)	291
SpeI	ACTAGT	1 cut(s)	575
Sse9I	AATT	4 cut(s)	264, 470, 569, 593
SsiI	CCGC	6 cut(s)	215, 698, 701, 892, 1005, 1145
SspMI	CTAG	3 cut(s)	354, 576, 605
SstI	GAGCTC	1 cut(s)	1023
StyD4I	CCNGG	4 cut(s)	322, 718, 798, 921
StyI	CCWWGG	2 cut(s)	198, 708
TaaI	ACNGT	1 cut(s)	670
TaiI	ACGT	9 cut(s)	25, 222, 837, 849, 879, 960, 972, 1002, 1099
TaqI	TCGA	8 cut(s)	115, 138, 162, 292, 733, 807, 930, 1023
TaqII	GACCGA	1 cut(s)	1129
TasI	AATT	4 cut(s)	264, 470, 569, 593
TatI	WGTACW	1 cut(s)	586
TauI	GCSGC	2 cut(s)	703, 1008
TfiI	GAWTC	2 cut(s)	1102, 1128
TscAI	CASTG	2 cut(s)	493, 1170
TseFI	GTSAC	2 cut(s)	530, 1108
TseI	GCWGC	3 cut(s)	209, 212, 1155
Tsp45I	GTSAC	2 cut(s)	530, 1108
TspGWI	ACGGA	2 cut(s)	362, 1049
TspRI	CASTG	2 cut(s)	493, 1170
Tth111I	GACNNNGTC	4 cut(s)	812, 875, 935, 956
Van91I	CCANNNNNTGG	1 cut(s)	269
VpaK11BI	GGWCC	5 cut(s)	60, 319, 658, 802, 925
XhoI	CTCGAG	1 cut(s)	291
XspI	CTAG	3 cut(s)	354, 576, 605
ZraI	GACGTC	1 cut(s)	220

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.