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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000004219 RLG00000005084 RLG00000010195 RLG00000013467 RLG00000014305 RLG00000028980 RLG00000030839 RLG00000032541 |
| rosa_multiflora | Rmu_co8333173.1_g000001 Rmu_sc0001609.1_g000028 Rmu_sc0003426.1_g000014 Rmu_sc0010981.1_g000007 Rmu_sc0019815.1_g000001 Rmu_sc0023018.1_g000001 Rmu_ssc0000323.1_g000018 |
| rosa_roxburghii | Rroxscaffold_1G00008410 Rroxscaffold_4G00294860 Rroxscaffold_5G00373940 |
| rosa_samantha | Rh2BG307500 Rh2CG285600 Rh3CG238400 Rh4CG114700 Rh5DG479400 Rh5DG522500 Rh6CG228800 Rh6DG235200 Rh7AG303100 Rh7CG263200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 215 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 61 |
| AciI | CCGC | 1 cut(s) | 36 |
| AcyI | GRCGYC | 1 cut(s) | 212 |
| AfeI | AGCGCT | 1 cut(s) | 25 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 61 |
| AgsI | TTSAA | 3 cut(s) | 224, 248, 275 |
| AluBI | AGCT | 2 cut(s) | 228, 257 |
| AluI | AGCT | 2 cut(s) | 228, 257 |
| Alw26I | GTCTC | 3 cut(s) | 10, 36, 192 |
| Aor51HI | AGCGCT | 1 cut(s) | 25 |
| AspLEI | GCGC | 1 cut(s) | 26 |
| AsuHPI | GGTGA | 1 cut(s) | 155 |
| AsuII | TTCGAA | 1 cut(s) | 174 |
| BceAI | ACGGC | 2 cut(s) | 152, 175 |
| BcoDI | GTCTC | 3 cut(s) | 10, 36, 192 |
| BfoI | RGCGCY | 1 cut(s) | 27 |
| Bpu14I | TTCGAA | 1 cut(s) | 174 |
| BsaHI | GRCGYC | 1 cut(s) | 212 |
| BsaI | GGTCTC | 1 cut(s) | 10 |
| BsaJI | CCNNGG | 1 cut(s) | 55 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 33, 63 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 61 |
| Bse1I | ACTGG | 1 cut(s) | 297 |
| BseDI | CCNNGG | 1 cut(s) | 55 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 61 |
| BseNI | ACTGG | 1 cut(s) | 297 |
| BseRI | GAGGAG | 1 cut(s) | 92 |
| BseYI | CCCAGC | 1 cut(s) | 20 |
| BsiSI | CCGG | 1 cut(s) | 39 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 61 |
| BsmAI | GTCTC | 3 cut(s) | 10, 36, 192 |
| BsmBI | CGTCTC | 1 cut(s) | 192 |
| Bso31I | GGTCTC | 1 cut(s) | 10 |
| Bsp119I | TTCGAA | 1 cut(s) | 174 |
| Bsp143I | GATC | 2 cut(s) | 30, 108 |
| BspACI | CCGC | 1 cut(s) | 36 |
| BspHI | TCATGA | 1 cut(s) | 103 |
| BspT104I | TTCGAA | 1 cut(s) | 174 |
| BspTNI | GGTCTC | 1 cut(s) | 10 |
| BsrI | ACTGG | 1 cut(s) | 297 |
| BssECI | CCNNGG | 1 cut(s) | 55 |
| BssMI | GATC | 2 cut(s) | 30, 108 |
| BssNI | GRCGYC | 1 cut(s) | 212 |
| BssT1I | CCWWGG | 1 cut(s) | 55 |
| Bst4CI | ACNGT | 1 cut(s) | 117 |
| Bst6I | CTCTTC | 1 cut(s) | 243 |
| BstACI | GRCGYC | 1 cut(s) | 212 |
| BstBI | TTCGAA | 1 cut(s) | 174 |
| BstH2I | RGCGCY | 1 cut(s) | 27 |
| BstHHI | GCGC | 1 cut(s) | 26 |
| BstKTI | GATC | 2 cut(s) | 33, 111 |
| BstMAI | GTCTC | 3 cut(s) | 10, 36, 192 |
| BstMBI | GATC | 2 cut(s) | 30, 108 |
| CciI | TCATGA | 1 cut(s) | 103 |
| CfoI | GCGC | 1 cut(s) | 26 |
| CviAII | CATG | 1 cut(s) | 104 |
| CviJI | RGCY | 3 cut(s) | 196, 228, 257 |
| CviKI_1 | RGCY | 3 cut(s) | 196, 228, 257 |
| DpnI | GATC | 2 cut(s) | 32, 110 |
| DpnII | GATC | 2 cut(s) | 30, 108 |
| Eam1104I | CTCTTC | 1 cut(s) | 243 |
| EarI | CTCTTC | 1 cut(s) | 243 |
| EciI | GGCGGA | 1 cut(s) | 25 |
| Eco130I | CCWWGG | 1 cut(s) | 55 |
| Eco31I | GGTCTC | 1 cut(s) | 10 |
| Eco47III | AGCGCT | 1 cut(s) | 25 |
| EcoT14I | CCWWGG | 1 cut(s) | 55 |
| ErhI | CCWWGG | 1 cut(s) | 55 |
| Esp3I | CGTCTC | 1 cut(s) | 192 |
| FaeI | CATG | 1 cut(s) | 107 |
| FaiI | YATR | 2 cut(s) | 105, 149 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 217, 249 |
| FatI | CATG | 1 cut(s) | 103 |
| GlaI | GCGC | 1 cut(s) | 25 |
| GsaI | CCCAGC | 1 cut(s) | 24 |
| HaeII | RGCGCY | 1 cut(s) | 27 |
| HapII | CCGG | 1 cut(s) | 39 |
| HhaI | GCGC | 1 cut(s) | 26 |
| Hin1I | GRCGYC | 1 cut(s) | 212 |
| Hin1II | CATG | 1 cut(s) | 107 |
| Hin6I | GCGC | 1 cut(s) | 24 |
| HinP1I | GCGC | 1 cut(s) | 24 |
| HinfI | GANTC | 1 cut(s) | 176 |
| HpaII | CCGG | 1 cut(s) | 39 |
| HphI | GGTGA | 1 cut(s) | 155 |
| Hpy188I | TCNGA | 3 cut(s) | 90, 241, 268 |
| Hpy188III | TCNNGA | 2 cut(s) | 104, 204 |
| Hpy99I | CGWCG | 4 cut(s) | 129, 132, 214, 217 |
| HpyAV | CCTTC | 1 cut(s) | 61 |
| HpyCH4III | ACNGT | 1 cut(s) | 117 |
| HpyCH4IV | ACGT | 1 cut(s) | 212 |
| HpySE526I | ACGT | 1 cut(s) | 212 |
| Hsp92I | GRCGYC | 1 cut(s) | 212 |
| Hsp92II | CATG | 1 cut(s) | 107 |
| HspAI | GCGC | 1 cut(s) | 24 |
| Kzo9I | GATC | 2 cut(s) | 30, 108 |
| LmnI | GCTCC | 1 cut(s) | 187 |
| LpnPI | CCDG | 4 cut(s) | 34, 52, 154, 278 |
| MaeII | ACGT | 1 cut(s) | 212 |
| MalI | GATC | 2 cut(s) | 32, 110 |
| MboI | GATC | 2 cut(s) | 30, 108 |
| MboII | GAAGA | 1 cut(s) | 260 |
| MluCI | AATT | 1 cut(s) | 15 |
| MnlI | CCTC | 4 cut(s) | 64, 70, 84, 209 |
| MspI | CCGG | 1 cut(s) | 39 |
| NdeII | GATC | 2 cut(s) | 30, 108 |
| NlaIII | CATG | 1 cut(s) | 107 |
| NspV | TTCGAA | 1 cut(s) | 174 |
| PagI | TCATGA | 1 cut(s) | 103 |
| PfeI | GAWTC | 1 cut(s) | 176 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 61 |
| PspFI | CCCAGC | 1 cut(s) | 20 |
| Sau3AI | GATC | 2 cut(s) | 30, 108 |
| SetI | ASST | 9 cut(s) | 61, 75, 145, 168, 215, 230, 246, 259, 273 |
| SfuI | TTCGAA | 1 cut(s) | 174 |
| Sse9I | AATT | 1 cut(s) | 15 |
| SsiI | CCGC | 1 cut(s) | 36 |
| SspI | AATATT | 1 cut(s) | 299 |
| StyI | CCWWGG | 1 cut(s) | 55 |
| TaaI | ACNGT | 1 cut(s) | 117 |
| TaiI | ACGT | 1 cut(s) | 215 |
| TaqI | TCGA | 4 cut(s) | 111, 124, 174, 205 |
| TasI | AATT | 1 cut(s) | 15 |
| TfiI | GAWTC | 1 cut(s) | 176 |
| TspDTI | ATGAA | 1 cut(s) | 92 |
| TspGWI | ACGGA | 1 cut(s) | 174 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 61 |
| ZraI | GACGTC | 1 cut(s) | 213 |