Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G25480 |
| fragaria_vesca | FvH4_2g29650 |
| malus_domestica | MD08G1143700.v1.1 MD08G1144900.v1.1 MD15G1120500.v1.1 MD15G1439700.v1.1 |
| prunus_persica | Prupe.1G473200_v2.0.a1 Prupe.1G473200_v2.0.a1 Prupe.1G473200_v2.0.a1 Prupe.1G473200_v2.0.a1 Prupe.1G473200_v2.0.a1 |
| pyrus_communis | pycom08g12220 pycom15g10870 |
| rosa_chinensis | RchiOBHm_Chr1g0355831 RchiOBHm_Chr6g0298621 |
| rosa_laevigata | RLG00000011498 |
| rosa_multiflora | Rmu_sc0004076.1_g000002 Rmu_sc0004500.1_g000017 |
| rosa_roxburghii | Rroxscaffold_7G00169480 |
| rosa_rugosa | Rorug03G0271800 Rorug03G0271800 Rorug03G0271900 Rorug06G0281800 |
| rosa_samantha | Rh2BG320400 Rh2CG300400 Rh2DG337600 Rh4AG109400 Rh4BG194000 Rh4DG193200 Rh6BG400900 Rh6CG406900 Rh6DG393500 |
| rosa_wichuraiana | Rw6G034370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 459 |
| AclWI | GGATC | 1 cut(s) | 408 |
| AcsI | RAATTY | 1 cut(s) | 287 |
| AfaI | GTAC | 4 cut(s) | 267, 388, 407, 520 |
| AgsI | TTSAA | 2 cut(s) | 287, 471 |
| AluBI | AGCT | 2 cut(s) | 279, 423 |
| AluI | AGCT | 2 cut(s) | 279, 423 |
| Alw26I | GTCTC | 2 cut(s) | 115, 149 |
| AlwI | GGATC | 1 cut(s) | 408 |
| ApoI | RAATTY | 1 cut(s) | 287 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 279 |
| AsuC2I | CCSGG | 1 cut(s) | 464 |
| BccI | CCATC | 1 cut(s) | 429 |
| BceAI | ACGGC | 1 cut(s) | 285 |
| BclI | TGATCA | 1 cut(s) | 304 |
| BcnI | CCSGG | 1 cut(s) | 464 |
| BcoDI | GTCTC | 2 cut(s) | 115, 149 |
| BfaI | CTAG | 2 cut(s) | 167, 390 |
| BmcAI | AGTACT | 1 cut(s) | 407 |
| Bme1390I | CCNGG | 1 cut(s) | 464 |
| BmiI | GGNNCC | 1 cut(s) | 526 |
| BmrFI | CCNGG | 1 cut(s) | 464 |
| BmsI | GCATC | 2 cut(s) | 3, 467 |
| BpuEI | CTTGAG | 1 cut(s) | 403 |
| BpuMI | CCSGG | 1 cut(s) | 464 |
| Bsa29I | ATCGAT | 1 cut(s) | 505 |
| BsaI | GGTCTC | 1 cut(s) | 115 |
| BsaJI | CCNNGG | 2 cut(s) | 396, 447 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 25, 55, 116, 146 |
| Bse1I | ACTGG | 4 cut(s) | 72, 98, 111, 526 |
| BseCI | ATCGAT | 1 cut(s) | 505 |
| BseDI | CCNNGG | 2 cut(s) | 396, 447 |
| BseNI | ACTGG | 4 cut(s) | 72, 98, 111, 526 |
| BseRI | GAGGAG | 1 cut(s) | 137 |
| BshVI | ATCGAT | 1 cut(s) | 505 |
| BsiSI | CCGG | 1 cut(s) | 464 |
| BslFI | GGGAC | 1 cut(s) | 234 |
| BsmAI | GTCTC | 2 cut(s) | 115, 149 |
| BsmFI | GGGAC | 1 cut(s) | 234 |
| Bso31I | GGTCTC | 1 cut(s) | 115 |
| Bsp143I | GATC | 3 cut(s) | 45, 304, 400 |
| Bsp19I | CCATGG | 1 cut(s) | 447 |
| BspDI | ATCGAT | 1 cut(s) | 505 |
| BspHI | TCATGA | 1 cut(s) | 291 |
| BspLI | GGNNCC | 1 cut(s) | 526 |
| BspPI | GGATC | 1 cut(s) | 408 |
| BspTNI | GGTCTC | 1 cut(s) | 115 |
| BsrI | ACTGG | 4 cut(s) | 72, 98, 111, 526 |
| BssECI | CCNNGG | 2 cut(s) | 396, 447 |
| BssMI | GATC | 3 cut(s) | 45, 304, 400 |
| BssT1I | CCWWGG | 2 cut(s) | 396, 447 |
| Bst4CI | ACNGT | 1 cut(s) | 334 |
| Bst6I | CTCTTC | 1 cut(s) | 366 |
| BstDSI | CCRYGG | 1 cut(s) | 447 |
| BstKTI | GATC | 3 cut(s) | 48, 307, 403 |
| BstMAI | GTCTC | 2 cut(s) | 115, 149 |
| BstMBI | GATC | 3 cut(s) | 45, 304, 400 |
| BstSCI | CCNGG | 1 cut(s) | 462 |
| Bsu15I | ATCGAT | 1 cut(s) | 505 |
| BsuTUI | ATCGAT | 1 cut(s) | 505 |
| BtgI | CCRYGG | 1 cut(s) | 447 |
| BtgZI | GCGATG | 1 cut(s) | 490 |
| BtsIMutI | CAGTG | 1 cut(s) | 330 |
| CciI | TCATGA | 1 cut(s) | 291 |
| ClaI | ATCGAT | 1 cut(s) | 505 |
| Csp6I | GTAC | 4 cut(s) | 266, 387, 406, 519 |
| CviAII | CATG | 4 cut(s) | 188, 292, 448, 537 |
| CviJI | RGCY | 5 cut(s) | 138, 279, 310, 423, 525 |
| CviKI_1 | RGCY | 5 cut(s) | 138, 279, 310, 423, 525 |
| CviQI | GTAC | 4 cut(s) | 266, 387, 406, 519 |
| DpnI | GATC | 3 cut(s) | 47, 306, 402 |
| DpnII | GATC | 3 cut(s) | 45, 304, 400 |
| Eam1104I | CTCTTC | 1 cut(s) | 366 |
| EarI | CTCTTC | 1 cut(s) | 366 |
| Eco130I | CCWWGG | 2 cut(s) | 396, 447 |
| Eco31I | GGTCTC | 1 cut(s) | 115 |
| EcoRI | GAATTC | 1 cut(s) | 287 |
| EcoT14I | CCWWGG | 2 cut(s) | 396, 447 |
| ErhI | CCWWGG | 2 cut(s) | 396, 447 |
| FaeI | CATG | 4 cut(s) | 191, 295, 451, 540 |
| FaqI | GGGAC | 1 cut(s) | 234 |
| FatI | CATG | 4 cut(s) | 187, 291, 447, 536 |
| FbaI | TGATCA | 1 cut(s) | 304 |
| FblI | GTMKAC | 1 cut(s) | 459 |
| FspBI | CTAG | 2 cut(s) | 167, 390 |
| HapII | CCGG | 1 cut(s) | 464 |
| Hin1II | CATG | 4 cut(s) | 191, 295, 451, 540 |
| HindIII | AAGCTT | 2 cut(s) | 277, 421 |
| HinfI | GANTC | 2 cut(s) | 247, 467 |
| HpaII | CCGG | 1 cut(s) | 464 |
| Hpy166II | GTNNAC | 3 cut(s) | 266, 322, 460 |
| Hpy188I | TCNGA | 2 cut(s) | 45, 181 |
| Hpy188III | TCNNGA | 4 cut(s) | 49, 112, 284, 292 |
| Hpy8I | GTNNAC | 3 cut(s) | 266, 322, 460 |
| HpyAV | CCTTC | 1 cut(s) | 508 |
| HpyCH4III | ACNGT | 1 cut(s) | 334 |
| HpyCH4V | TGCA | 2 cut(s) | 24, 256 |
| Hsp92II | CATG | 4 cut(s) | 191, 295, 451, 540 |
| Ksp22I | TGATCA | 1 cut(s) | 304 |
| Kzo9I | GATC | 3 cut(s) | 45, 304, 400 |
| LmnI | GCTCC | 2 cut(s) | 124, 530 |
| LpnPI | CCDG | 7 cut(s) | 34, 53, 79, 92, 218, 477, 507 |
| LweI | GCATC | 2 cut(s) | 3, 467 |
| MaeI | CTAG | 2 cut(s) | 167, 390 |
| MaeIII | GTNAC | 1 cut(s) | 226 |
| MalI | GATC | 3 cut(s) | 47, 306, 402 |
| MboI | GATC | 3 cut(s) | 45, 304, 400 |
| MboII | GAAGA | 2 cut(s) | 225, 383 |
| MluCI | AATT | 2 cut(s) | 287, 295 |
| MlyI | GAGTC | 1 cut(s) | 256 |
| MnlI | CCTC | 2 cut(s) | 158, 427 |
| MroXI | GAANNNNTTC | 1 cut(s) | 279 |
| MspI | CCGG | 1 cut(s) | 464 |
| MspR9I | CCNGG | 1 cut(s) | 464 |
| NciI | CCSGG | 1 cut(s) | 464 |
| NcoI | CCATGG | 1 cut(s) | 447 |
| NdeII | GATC | 3 cut(s) | 45, 304, 400 |
| NlaIII | CATG | 4 cut(s) | 191, 295, 451, 540 |
| NlaIV | GGNNCC | 1 cut(s) | 526 |
| PagI | TCATGA | 1 cut(s) | 291 |
| PdmI | GAANNNNTTC | 1 cut(s) | 279 |
| PfeI | GAWTC | 1 cut(s) | 467 |
| PleI | GAGTC | 1 cut(s) | 255 |
| PpsI | GAGTC | 1 cut(s) | 255 |
| PspN4I | GGNNCC | 1 cut(s) | 526 |
| RsaI | GTAC | 4 cut(s) | 267, 388, 407, 520 |
| RsaNI | GTAC | 4 cut(s) | 266, 387, 406, 519 |
| Sau3AI | GATC | 3 cut(s) | 45, 304, 400 |
| ScaI | AGTACT | 1 cut(s) | 407 |
| SchI | GAGTC | 1 cut(s) | 256 |
| ScrFI | CCNGG | 1 cut(s) | 464 |
| SetI | ASST | 3 cut(s) | 281, 398, 425 |
| SfaNI | GCATC | 2 cut(s) | 3, 467 |
| SmlI | CTYRAG | 1 cut(s) | 418 |
| SmoI | CTYRAG | 1 cut(s) | 418 |
| Sse9I | AATT | 2 cut(s) | 287, 295 |
| SspMI | CTAG | 2 cut(s) | 167, 390 |
| StyD4I | CCNGG | 1 cut(s) | 462 |
| StyI | CCWWGG | 2 cut(s) | 396, 447 |
| TaaI | ACNGT | 1 cut(s) | 334 |
| TaqI | TCGA | 2 cut(s) | 113, 505 |
| TasI | AATT | 2 cut(s) | 287, 295 |
| TatI | WGTACW | 2 cut(s) | 386, 405 |
| TfiI | GAWTC | 1 cut(s) | 467 |
| TscAI | CASTG | 1 cut(s) | 337 |
| TspDTI | ATGAA | 4 cut(s) | 229, 280, 308, 384 |
| TspRI | CASTG | 1 cut(s) | 337 |
| XapI | RAATTY | 1 cut(s) | 287 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 64, 355 |
| XmiI | GTMKAC | 1 cut(s) | 459 |
| XmnI | GAANNNNTTC | 1 cut(s) | 279 |
| XspI | CTAG | 2 cut(s) | 167, 390 |
| ZrmI | AGTACT | 1 cut(s) | 407 |