Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004650.1

Orthogroup ID

OG0002521

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 6061

Gene Structure 6061 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2602 bp

gtgcgacttcaactttccgataaagatagagatggagatggagatggagaaggaacaggagcttgagtggaccaaagcgcagagcattggaataagcgtagaccttgtcgctgcagcaaaaaagcagcttcagtttcttgctgctgttgataggaatcggtatctgtacgaagggccggctcttaacagggctatctataggtacaacgcttgttggcttccgttgcttgccaaacattcagactcccaggtttctgagggacctttggttgtacctcttgattgtgaatggatttggcattgtcacaggctaaatccggttcgatacaagactgactgtgaagaactttatggaaagattcttgacaactcgaatgttgtttcctctgttgaaggttcttgtaaaagtaaaactgaagaaatttggaatagtctgtatccagcagaaccctaccacttcaacttacaaaaggcattgtccgaggatatatctgaacggatttccaaacttgacaaatgcaccaaatatgatctggtttcagctgttaaaagacaatctcctttcttttaccaggtatctccaccccatatgaaccatgatctgtttcttgaagtagctgcgtctagatataaagggtttcttcatttaatcaagagcaataatgagaagtctctacgacgtttctgcgttccgacatatgatattgatcttatctggcatactcaccaattgcatcctgtatcctattgtaaagatttgcatgaactgcttggaaaggtattggagcatgacgacatggattcggacagaactaaagggaagaagctggatactgggttctctgtaaccaccaagcaatgggaagaggcatttggtaccaggtattggagagcaggggcaatgtatagaggcagggctccatctcctctcacaaccactccttatcagtctaacatcactagcaaggatgtaattgcatgtcctgatcatcagaaagtaattgagcttccagaggtgaaagctgtggaggttcttttggagtttctggaagttaggaacttaccagaaggacacaaagggcttctctttgcctcattcagtaagactacaaaggatatatttttcaatgctaagcggcgactcagcattttttctgagtttggagagaaacaggttgcttctttccagtgtgaacctactggagagctgctttttgaactcatgtcccattcacctttatatataccaatgaaaagggcatataaaacattaggttctgcttcgttctctcttcaagactgtctagtcccaccctctaaattatatgcagaaaaatggttagagatggtgccaagctctaaagttgggaacttaaaaccaatctacatgcgattcgctatgtcttttactattccaaccatagcacaacacacacttcatgtggttcgttctcgaccgttttcaaaaagttcttgttttttcccctttgctgggaagaatcaagatgccaagaattggacacaagtgattgatgaaactggaacagaggtcctccgcctgcaaatgagggatactgaaaaggaaaaggtaaagggaatcagcgttccaaggaaagaggtggttggaattaccaagtctgggaaaatatgtactcttgcagaatttgtggggactggttggtctttgatagattcacactggtcccttcatcgcgagaaaaattccgagggatacctctttttgctaaagggaaaaaagatggtcaaattcttcccaggcagaaagctggattatgaacataagcattatgaggaaaatacaactgaagataaaactgaacaacacttcgtgaccttagttgaattctctgctgaagatccttatggcaaagcagtggcattgcttgacctaaaatctgggtgcatcaaggtaaaggaagaatcaattacagttcctggggtcataatatcttttatactgtcggataagctaaagaaggaaagatatgacgggtttgctgttaaccctgcggagatgggtagtgtcgaggaagaaattaaagagaaccctgaggaaggcaaaggcaccaacttgagctcttctggagcaagtgtagttaaccttaaatctgaggtggttgaaggaaatgtagtgacgtctcaaaaaggtggaggctgtggtggagcatgtggcagtgggtgtggaaatgcaacaaggagtgccggcgctggtggatgtggaagtggttgtggtggaggatgcggaaacatggagaagagtagcgcttgcggcagtggatgtggtggaggatgtggaaacttggtgaagagtggcggctgtggtggtggctgtggaggtggctgtggtggtggctgtggtggtggctgtggaggtggttgtggaaacatactgaagagtggtggctgtggtggctgtggcggcggctgtgggaacatactgaagagtggtggctgcggtgggtgtggtggtagcggtggttgtggtagtgggtgcggtggcttattcaagggtaatggttatcatgaaaatacatctggtaactcatgtgccgaagaccacccaaaggcagtagtagtttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009787 GO:0009966 GO:0009987 GO:0010646 GO:0010928 GO:0016020 GO:0023051 GO:0033554 GO:0044464 GO:0048580 GO:0048583 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051716 GO:0065007 GO:0071214 GO:0071470 GO:0071944 GO:0104004 GO:1901419 GO:1905957 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRDP-like

Protein Analysis

866

Amino Acids

94.39

Weight (kDa)

7.46

Isoelectric Point (pI)

43.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRDP-like	PF07173	12 - 112	6.6e-10	Glycine-rich domain-containing protein-like
GRDP-like	PF07173	108 - 252	1.3e-57	Glycine-rich domain-containing protein-like
C2_GRDP	PF25334	339 - 471	4.8e-54	C2 domain of glycine-rich domain-containing protein
GRDP_C	PF25335	509 - 644	1.6e-36	Glycine Rich Domain Protein C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002521)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22660 AT2G22660 AT2G22660 AT4G37900 AT4G37900
fragaria_vesca	FvH4_1g18970 FvH4_1g18970 FvH4_1g18970 FvH4_5g33890 FvH4_5g33890 FvH4_5g33890
malus_domestica	MD01G1044900.v1.1 MD08G1208800.v1.1 MD08G1209100.v1.1
prunus_persica	Prupe.1G539900_v2.0.a1 Prupe.6G209600_v2.0.a1
pyrus_communis	pycom08g18020
rosa_chinensis	RchiOBHm_Chr2g0109991 RchiOBHm_Chr7g0233251 RchiOBHm_Chr7g0233261
rosa_laevigata	RLG00000001282 RLG00000017776
rosa_multiflora	Rmu_co8210630.1_g000001 Rmu_sc0004650.1_g000001 Rmu_sc0008314.1_g000009 Rmu_sc0035251.1_g000001 Rmu_sc0035252.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133800
rosa_rugosa	Rorug02G0165000 Rorug07G0279600
rosa_samantha	Rh2AG216500 Rh2BG226400 Rh2CG218700 Rh2DG222100 Rh7AG435600 Rh7AG435700 Rh7BG408000 Rh7CG454700 Rh7CG454800 Rh7DG423900
rosa_wichuraiana	Rw2G016730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1305, 1679
AatII	GACGTC	1 cut(s)	2160
Acc65I	GGTACC	1 cut(s)	876
AccB1I	GGYRCC	3 cut(s)	876, 1349, 2085
AccB7I	CCANNNNNTGG	3 cut(s)	859, 886, 1516
AccI	GTMKAC	1 cut(s)	100
AccII	CGCG	1 cut(s)	1714
AclWI	GGATC	1 cut(s)	1872
AcsI	RAATTY	5 cut(s)	421, 1662, 1721, 1767, 1863
AcuI	CTGAAG	6 cut(s)	114, 436, 1846, 1894, 2433, 2481
AcyI	GRCGYC	1 cut(s)	2157
AdeI	CACNNNGTG	1 cut(s)	1850
AfaI	GTAC	5 cut(s)	168, 204, 274, 878, 1652
AfeI	AGCGCT	1 cut(s)	2285
AfiI	CCNNNNNNNGG	8 cut(s)	859, 886, 1491, 1492, 1516, 1639, 2076, 2585
AjnI	CCWGG	5 cut(s)	247, 571, 879, 1775, 1955
AjuI	GAANNNNNNNTTGG	2 cut(s)	856, 888
AloI	GAACNNNNNNTCC	4 cut(s)	822, 854, 1588, 1620
Alw21I	GWGCWC	1 cut(s)	2100
Alw26I	GTCTC	2 cut(s)	676, 2164
AlwI	GGATC	1 cut(s)	1872
AlwNI	CAGNNNCTG	1 cut(s)	1956
Aor51HI	AGCGCT	1 cut(s)	2285
AoxI	GGCC	1 cut(s)	174
ApeKI	GCWGC	7 cut(s)	111, 114, 125, 141, 618, 1208, 2473
ApoI	RAATTY	5 cut(s)	421, 1662, 1721, 1767, 1863
Asp718I	GGTACC	1 cut(s)	876
AspLEI	GCGC	3 cut(s)	80, 2229, 2286
AspS9I	GGNCC	5 cut(s)	70, 174, 261, 1550, 1702
AsuHPI	GGTGA	4 cut(s)	717, 1028, 1225, 2336
AvaII	GGWCC	4 cut(s)	70, 261, 1550, 1702
AxyI	CCTNAGG	1 cut(s)	2071
BanI	GGYRCC	3 cut(s)	876, 1349, 2085
BanII	GRGCYC	2 cut(s)	920, 2100
BarI	GAAGNNNNNNTAC	2 cut(s)	991, 1023
BbsI	GAAGAC	1 cut(s)	2581
Bbv12I	GWGCWC	1 cut(s)	2100
BbvI	GCAGC	7 cut(s)	98, 126, 128, 137, 605, 1195, 2460
BccI	CCATC	7 cut(s)	26, 32, 38, 929, 1340, 1754, 2030
BcgI	CGANNNNNNTGC	2 cut(s)	667, 701
BciT130I	CCWGG	5 cut(s)	249, 573, 881, 1777, 1957
BciVI	GTATCC	5 cut(s)	448, 752, 824, 1565, 1725
BclI	TGATCA	1 cut(s)	986
BcoDI	GTCTC	2 cut(s)	676, 2164
BfaI	CTAG	3 cut(s)	625, 961, 1305
BfmI	CTRYAG	2 cut(s)	112, 197
BfoI	RGCGCY	2 cut(s)	2230, 2287
BfuI	GTATCC	5 cut(s)	448, 752, 824, 1565, 1725
BlpI	GCTNAGC	1 cut(s)	1132
Bme1390I	CCNGG	5 cut(s)	249, 573, 881, 1777, 1957
Bme18I	GGWCC	4 cut(s)	70, 261, 1550, 1702
BmgT120I	GGNCC	5 cut(s)	70, 174, 261, 1550, 1702
BmiI	GGNNCC	6 cut(s)	262, 878, 919, 1351, 1704, 2087
BmrFI	CCNGG	5 cut(s)	249, 573, 881, 1777, 1957
BmrI	ACTGGG	1 cut(s)	844
BmsI	GCATC	4 cut(s)	743, 1496, 1933, 2250
BmuI	ACTGGG	1 cut(s)	844
BpiI	GAAGAC	1 cut(s)	2581
BpmI	CTGGAG	2 cut(s)	1222, 2125
Bpu1102I	GCTNAGC	1 cut(s)	1132
BpuEI	CTTGAG	2 cut(s)	84, 2114
BsaBI	GATNNNNATC	2 cut(s)	154, 706
BsaHI	GRCGYC	1 cut(s)	2157
BsaJI	CCNNGG	6 cut(s)	247, 481, 1608, 1726, 1775, 1956
BsaWI	WCCGGW	1 cut(s)	317
BsaXI	ACNNNNNCTCC	6 cut(s)	51, 81, 923, 953, 2098, 2128
Bsc4I	CCNNNNNNNGG	8 cut(s)	859, 886, 1491, 1492, 1516, 1639, 2076, 2585
Bse118I	RCCGGY	2 cut(s)	176, 2223
Bse1I	ACTGG	6 cut(s)	839, 1187, 1205, 1544, 1679, 1704
Bse21I	CCTNAGG	1 cut(s)	2071
Bse3DI	GCAATG	3 cut(s)	864, 907, 1899
Bse8I	GATNNNNATC	2 cut(s)	154, 706
BseBI	CCWGG	5 cut(s)	249, 573, 881, 1777, 1957
BseDI	CCNNGG	6 cut(s)	247, 481, 1608, 1726, 1775, 1956
BseGI	GGATG	6 cut(s)	734, 974, 2241, 2265, 2304, 2316
BseJI	GATNNNNATC	2 cut(s)	154, 706
BseLI	CCNNNNNNNGG	8 cut(s)	859, 886, 1491, 1492, 1516, 1639, 2076, 2585
BseMI	GCAATG	3 cut(s)	864, 907, 1899
BseMII	CTCAG	5 cut(s)	247, 1147, 1157, 2062, 2122
BseNI	ACTGG	6 cut(s)	839, 1187, 1205, 1544, 1679, 1704
BseRI	GAGGAG	1 cut(s)	916
BseXI	GCAGC	7 cut(s)	98, 126, 128, 137, 605, 1195, 2460
BseYI	CCCAGC	1 cut(s)	1491
Bsh1236I	CGCG	1 cut(s)	1714
Bsh1285I	CGRYCG	1 cut(s)	1458
BshFI	GGCC	1 cut(s)	176
BshNI	GGYRCC	3 cut(s)	876, 1349, 2085
BsiEI	CGRYCG	1 cut(s)	1458
BsiHKAI	GWGCWC	1 cut(s)	2100
BsiSI	CCGG	3 cut(s)	177, 318, 2224
BslFI	GGGAC	5 cut(s)	274, 1211, 1293, 1685, 1688
BslI	CCNNNNNNNGG	8 cut(s)	859, 886, 1491, 1492, 1516, 1639, 2076, 2585
BsmAI	GTCTC	2 cut(s)	676, 2164
BsmBI	CGTCTC	1 cut(s)	2164
BsmFI	GGGAC	5 cut(s)	274, 1211, 1293, 1685, 1688
BsnI	GGCC	1 cut(s)	176
Bsp1286I	GDGCHC	2 cut(s)	920, 2100
Bsp143I	GATC	5 cut(s)	530, 599, 707, 986, 1877
Bsp1720I	GCTNAGC	1 cut(s)	1132
Bsp68I	TCGCGA	1 cut(s)	1714
BspANI	GGCC	1 cut(s)	176
BspCNI	CTCAG	5 cut(s)	248, 1148, 1156, 2063, 2123
BspFNI	CGCG	1 cut(s)	1714
BspHI	TCATGA	1 cut(s)	2543
BspLI	GGNNCC	6 cut(s)	262, 878, 919, 1351, 1704, 2087
BspMAI	CTGCAG	1 cut(s)	116
BspPI	GGATC	1 cut(s)	1872
BspQI	GCTCTTC	1 cut(s)	2105
BspT107I	GGYRCC	3 cut(s)	876, 1349, 2085
BsrDI	GCAATG	3 cut(s)	864, 907, 1899
BsrFI	RCCGGY	2 cut(s)	176, 2223
BsrI	ACTGG	6 cut(s)	839, 1187, 1205, 1544, 1679, 1704
BssAI	RCCGGY	2 cut(s)	176, 2223
BssECI	CCNNGG	6 cut(s)	247, 481, 1608, 1726, 1775, 1956
BssMI	GATC	5 cut(s)	530, 599, 707, 986, 1877
BssNI	GRCGYC	1 cut(s)	2157
BssT1I	CCWWGG	1 cut(s)	1608
Bst2UI	CCWGG	5 cut(s)	249, 573, 881, 1777, 1957
Bst4CI	ACNGT	5 cut(s)	339, 1302, 1459, 1952, 1981
Bst6I	CTCTTC	7 cut(s)	859, 1297, 2105, 2271, 2322, 2409, 2457
BstACI	GRCGYC	1 cut(s)	2157
BstAPI	GCANNNNNTGC	1 cut(s)	767
BstC8I	GCNNGC	5 cut(s)	178, 229, 1560, 2225, 2288
BstDEI	CTNAG	7 cut(s)	256, 1132, 1143, 1156, 1856, 2071, 2131
BstENI	CCTNNNNNAGG	1 cut(s)	2074
BstF5I	GGATG	6 cut(s)	734, 974, 2241, 2265, 2304, 2316
BstFNI	CGCG	1 cut(s)	1714
BstH2I	RGCGCY	2 cut(s)	2230, 2287
BstHHI	GCGC	3 cut(s)	80, 2229, 2286
BstKTI	GATC	5 cut(s)	533, 602, 710, 989, 1880
BstMAI	GTCTC	2 cut(s)	676, 2164
BstMBI	GATC	5 cut(s)	530, 599, 707, 986, 1877
BstMCI	CGRYCG	1 cut(s)	1458
BstMWI	GCNNNNNNNGC	5 cut(s)	224, 767, 2290, 2431, 2440
BstNI	CCWGG	5 cut(s)	249, 573, 881, 1777, 1957
BstNSI	RCATGY	3 cut(s)	982, 1391, 2191
BstSCI	CCNGG	5 cut(s)	247, 571, 879, 1775, 1955
BstSFI	CTRYAG	2 cut(s)	112, 197
BstUI	CGCG	1 cut(s)	1714
BstV1I	GCAGC	7 cut(s)	98, 126, 128, 137, 605, 1195, 2460
BstV2I	GAAGAC	1 cut(s)	2581
BstX2I	RGATCY	1 cut(s)	1877
BstYI	RGATCY	1 cut(s)	1877
Bsu36I	CCTNAGG	1 cut(s)	2071
BsuI	GTATCC	5 cut(s)	448, 752, 824, 1565, 1725
BsuRI	GGCC	1 cut(s)	176
BtgZI	GCGATG	1 cut(s)	1695
BtsCI	GGATG	6 cut(s)	734, 974, 2241, 2265, 2304, 2316
BtsI	GCAGTG	3 cut(s)	1900, 2201, 2300
BtsIMutI	CAGTG	5 cut(s)	1194, 1697, 1900, 2201, 2300
BtuMI	TCGCGA	1 cut(s)	1714
Cac8I	GCNNGC	5 cut(s)	178, 229, 1560, 2225, 2288
CaiI	CAGNNNCTG	1 cut(s)	1956
CciI	TCATGA	1 cut(s)	2543
CfoI	GCGC	3 cut(s)	80, 2229, 2286
Cfr10I	RCCGGY	2 cut(s)	176, 2223
Cfr13I	GGNCC	5 cut(s)	70, 174, 261, 1550, 1702
CseI	GACGC	1 cut(s)	610
CsiI	ACCWGGT	2 cut(s)	571, 879
Csp6I	GTAC	5 cut(s)	167, 203, 273, 877, 1651
CviQI	GTAC	5 cut(s)	167, 203, 273, 877, 1651
DdeI	CTNAG	7 cut(s)	256, 1132, 1143, 1156, 1856, 2071, 2131
DpnI	GATC	5 cut(s)	532, 601, 709, 988, 1879
DpnII	GATC	5 cut(s)	530, 599, 707, 986, 1877
DraIII	CACNNNGTG	1 cut(s)	1850
DrdI	GACNNNNNNGTC	2 cut(s)	1305, 1679
DseDI	GACNNNNNNGTC	2 cut(s)	1305, 1679
Eam1104I	CTCTTC	7 cut(s)	859, 1297, 2105, 2271, 2322, 2409, 2457
EarI	CTCTTC	7 cut(s)	859, 1297, 2105, 2271, 2322, 2409, 2457
EciI	GGCGGA	1 cut(s)	1545
Ecl136II	GAGCTC	1 cut(s)	2098
Eco130I	CCWWGG	1 cut(s)	1608
Eco24I	GRGCYC	2 cut(s)	920, 2100
Eco47I	GGWCC	4 cut(s)	70, 261, 1550, 1702
Eco47III	AGCGCT	1 cut(s)	2285
Eco53kI	GAGCTC	1 cut(s)	2098
Eco57I	CTGAAG	6 cut(s)	114, 436, 1846, 1894, 2433, 2481
Eco81I	CCTNAGG	1 cut(s)	2071
EcoICRI	GAGCTC	1 cut(s)	2098
EcoNI	CCTNNNNNAGG	1 cut(s)	2074
EcoO109I	RGGNCCY	2 cut(s)	261, 1550
EcoRI	GAATTC	1 cut(s)	1863
EcoRII	CCWGG	5 cut(s)	247, 571, 879, 1775, 1955
EcoT14I	CCWWGG	1 cut(s)	1608
EcoT38I	GRGCYC	2 cut(s)	920, 2100
ErhI	CCWWGG	1 cut(s)	1608
Esp3I	CGTCTC	1 cut(s)	2164
FalI	AAGNNNNNCTT	2 cut(s)	625, 657
FaqI	GGGAC	5 cut(s)	274, 1211, 1293, 1685, 1688
FauNDI	CATATG	2 cut(s)	589, 698
FbaI	TGATCA	1 cut(s)	986
FblI	GTMKAC	1 cut(s)	100
FokI	GGATG	6 cut(s)	721, 981, 2248, 2272, 2311, 2323
FriOI	GRGCYC	2 cut(s)	920, 2100
FspBI	CTAG	3 cut(s)	625, 961, 1305
GlaI	GCGC	3 cut(s)	79, 2228, 2285
GsaI	CCCAGC	1 cut(s)	1495
GsuI	CTGGAG	2 cut(s)	1222, 2125
HaeII	RGCGCY	2 cut(s)	2230, 2287
HaeIII	GGCC	1 cut(s)	176
HapII	CCGG	3 cut(s)	177, 318, 2224
HgaI	GACGC	1 cut(s)	610
HhaI	GCGC	3 cut(s)	80, 2229, 2286
Hin1I	GRCGYC	1 cut(s)	2157
Hin6I	GCGC	3 cut(s)	78, 2227, 2284
HinP1I	GCGC	3 cut(s)	78, 2227, 2284
HincII	GTYRAC	2 cut(s)	2024, 2120
HindII	GTYRAC	2 cut(s)	2024, 2120
HpaI	GTTAAC	2 cut(s)	2024, 2120
HpaII	CCGG	3 cut(s)	177, 318, 2224
HphI	GGTGA	4 cut(s)	717, 1028, 1225, 2336
Hpy166II	GTNNAC	5 cut(s)	70, 101, 1194, 2024, 2120
Hpy8I	GTNNAC	5 cut(s)	70, 101, 1194, 2024, 2120
Hpy99I	CGWCG	1 cut(s)	682
HpyAV	CCTTC	8 cut(s)	44, 165, 387, 1062, 1716, 1991, 2070, 2136
HpyCH4III	ACNGT	5 cut(s)	339, 1302, 1459, 1952, 1981
HpyCH4IV	ACGT	2 cut(s)	680, 2157
HpyF10VI	GCNNNNNNNGC	5 cut(s)	224, 767, 2290, 2431, 2440
HpyF3I	CTNAG	7 cut(s)	256, 1132, 1143, 1156, 1856, 2071, 2131
HpySE526I	ACGT	2 cut(s)	680, 2157
Hsp92I	GRCGYC	1 cut(s)	2157
HspAI	GCGC	3 cut(s)	78, 2227, 2284
KpnI	GGTACC	1 cut(s)	880
KroI	GCCGGC	2 cut(s)	176, 2223
KroNI	GCCGGC	2 cut(s)	178, 2225
Ksp22I	TGATCA	1 cut(s)	986
KspAI	GTTAAC	2 cut(s)	2024, 2120
Kzo9I	GATC	5 cut(s)	530, 599, 707, 986, 1877
LguI	GCTCTTC	1 cut(s)	2105
LmnI	GCTCC	5 cut(s)	59, 785, 923, 2106, 2184
Lsp1109I	GCAGC	7 cut(s)	98, 126, 128, 137, 605, 1195, 2460
LweI	GCATC	4 cut(s)	743, 1496, 1933, 2250
MabI	ACCWGGT	2 cut(s)	571, 879
MaeI	CTAG	3 cut(s)	625, 961, 1305
MaeII	ACGT	2 cut(s)	680, 2157
MaeIII	GTNAC	5 cut(s)	303, 845, 1850, 2153, 2559
MalI	GATC	5 cut(s)	532, 601, 709, 988, 1879
MboI	GATC	5 cut(s)	530, 599, 707, 986, 1877
MfeI	CAATTG	1 cut(s)	729
MflI	RGATCY	1 cut(s)	1877
MhlI	GDGCHC	2 cut(s)	920, 2100
MlyI	GAGTC	2 cut(s)	237, 1135
MmeI	TCCRAC	4 cut(s)	717, 1440, 1604, 1963
MroNI	GCCGGC	2 cut(s)	176, 2223
MseI	TTAA	9 cut(s)	184, 547, 648, 1374, 2023, 2059, 2119, 2125, 2600
MspA1I	CMGCKG	1 cut(s)	543
MspI	CCGG	3 cut(s)	177, 318, 2224
MspR9I	CCNGG	5 cut(s)	249, 573, 881, 1777, 1957
MunI	CAATTG	1 cut(s)	729
MvaI	CCWGG	5 cut(s)	249, 573, 881, 1777, 1957
MvnI	CGCG	1 cut(s)	1714
MwoI	GCNNNNNNNGC	5 cut(s)	224, 767, 2290, 2431, 2440
NaeI	GCCGGC	2 cut(s)	178, 2225
NdeI	CATATG	2 cut(s)	589, 698
NdeII	GATC	5 cut(s)	530, 599, 707, 986, 1877
NgoMIV	GCCGGC	2 cut(s)	176, 2223
NlaIV	GGNNCC	6 cut(s)	262, 878, 919, 1351, 1704, 2087
NmuCI	GTSAC	3 cut(s)	303, 1850, 2153
NruI	TCGCGA	1 cut(s)	1714
NspI	RCATGY	3 cut(s)	982, 1391, 2191
PagI	TCATGA	1 cut(s)	2543
PciSI	GCTCTTC	1 cut(s)	2105
PdiI	GCCGGC	2 cut(s)	178, 2225
PfeI	GAWTC	8 cut(s)	155, 359, 801, 1393, 1499, 1597, 1692, 1941
PflFI	GACNNNGTC	1 cut(s)	105
PflMI	CCANNNNNTGG	3 cut(s)	859, 886, 1516
PleI	GAGTC	2 cut(s)	237, 1135
PpsI	GAGTC	2 cut(s)	237, 1135
PpuMI	RGGWCCY	2 cut(s)	261, 1550
Psp124BI	GAGCTC	1 cut(s)	2100
Psp5II	RGGWCCY	2 cut(s)	261, 1550
Psp6I	CCWGG	5 cut(s)	247, 571, 879, 1775, 1955
PspFI	CCCAGC	1 cut(s)	1491
PspGI	CCWGG	5 cut(s)	247, 571, 879, 1775, 1955
PspN4I	GGNNCC	6 cut(s)	262, 878, 919, 1351, 1704, 2087
PspPI	GGNCC	5 cut(s)	70, 174, 261, 1550, 1702
PspPPI	RGGWCCY	2 cut(s)	261, 1550
PstI	CTGCAG	1 cut(s)	116
PstNI	CAGNNNCTG	1 cut(s)	1956
PsuI	RGATCY	1 cut(s)	1877
PsyI	GACNNNGTC	1 cut(s)	105
PvuII	CAGCTG	1 cut(s)	543
RruI	TCGCGA	1 cut(s)	1714
RsaI	GTAC	5 cut(s)	168, 204, 274, 878, 1652
RsaNI	GTAC	5 cut(s)	167, 203, 273, 877, 1651
SacI	GAGCTC	1 cut(s)	2100
SapI	GCTCTTC	1 cut(s)	2105
SaqAI	TTAA	9 cut(s)	184, 547, 648, 1374, 2023, 2059, 2119, 2125, 2600
Sau3AI	GATC	5 cut(s)	530, 599, 707, 986, 1877
Sau96I	GGNCC	5 cut(s)	70, 174, 261, 1550, 1702
SchI	GAGTC	2 cut(s)	237, 1135
ScrFI	CCNGG	5 cut(s)	249, 573, 881, 1777, 1957
SduI	GDGCHC	2 cut(s)	920, 2100
SexAI	ACCWGGT	2 cut(s)	571, 879
SfaNI	GCATC	4 cut(s)	743, 1496, 1933, 2250
SfcI	CTRYAG	2 cut(s)	112, 197
SinI	GGWCC	4 cut(s)	70, 261, 1550, 1702
SmlI	CTYRAG	2 cut(s)	63, 2093
SmoI	CTYRAG	2 cut(s)	63, 2093
SspMI	CTAG	3 cut(s)	625, 961, 1305
SstI	GAGCTC	1 cut(s)	2100
StyD4I	CCNGG	5 cut(s)	247, 571, 879, 1775, 1955
StyI	CCWWGG	1 cut(s)	1608
TaaI	ACNGT	5 cut(s)	339, 1302, 1459, 1952, 1981
TaiI	ACGT	2 cut(s)	683, 2160
TaqI	TCGA	4 cut(s)	323, 372, 1454, 2047
TatI	WGTACW	1 cut(s)	1650
TauI	GCSGC	5 cut(s)	1139, 2293, 2338, 2443, 2446
TfiI	GAWTC	8 cut(s)	155, 359, 801, 1393, 1499, 1597, 1692, 1941
Tru1I	TTAA	9 cut(s)	184, 547, 648, 1374, 2023, 2059, 2119, 2125, 2600
Tru9I	TTAA	9 cut(s)	184, 547, 648, 1374, 2023, 2059, 2119, 2125, 2600
TscAI	CASTG	5 cut(s)	1194, 1704, 1900, 2201, 2300
TseFI	GTSAC	3 cut(s)	303, 1850, 2153
TseI	GCWGC	7 cut(s)	111, 114, 125, 141, 618, 1208, 2473
Tsp45I	GTSAC	3 cut(s)	303, 1850, 2153
TspDTI	ATGAA	9 cut(s)	606, 633, 778, 1266, 1428, 1549, 1698, 1810, 2560
TspGWI	ACGGA	2 cut(s)	211, 512
TspRI	CASTG	5 cut(s)	1194, 1704, 1900, 2201, 2300
Tth111I	GACNNNGTC	1 cut(s)	105
Van91I	CCANNNNNTGG	3 cut(s)	859, 886, 1516
VpaK11BI	GGWCC	4 cut(s)	70, 261, 1550, 1702
XagI	CCTNNNNNAGG	1 cut(s)	2074
XapI	RAATTY	5 cut(s)	421, 1662, 1721, 1767, 1863
XbaI	TCTAGA	1 cut(s)	624
XceI	RCATGY	3 cut(s)	982, 1391, 2191
XcmI	CCANNNNNNNNNTGG	1 cut(s)	530
XmiI	GTMKAC	1 cut(s)	100
XspI	CTAG	3 cut(s)	625, 961, 1305
ZraI	GACGTC	1 cut(s)	2158

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.