UBX domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G48690 AT5G48690 AT5G48690 |
| fragaria_vesca | FvH4_2g18750 FvH4_2g18750 |
| malus_domestica | MD05G1173000.v1.1 |
| prunus_persica | Prupe.8G200600_v2.0.a1 Prupe.8G200600_v2.0.a1 Prupe.8G200600_v2.0.a1 Prupe.8G200600_v2.0.a1 Prupe.8G200600_v2.0.a1 |
| pyrus_communis | pycom05g15970 |
| rosa_chinensis | RchiOBHm_Chr6g0284421 RchiOBHm_Chr6g0284441 |
| rosa_laevigata | RLG00000012745 |
| rosa_multiflora | Rmu_sc0005959.1_g000001 Rmu_sc0032923.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00184710 |
| rosa_rugosa | Rorug06G0163100 Rorug06G0163200 Rorug06G0163300 Rorug06G0163400 Rorug06G0163500 Rorug06G0163600 Rorug06G0163700 |
| rosa_samantha | Rh6AG275900 Rh6BG276300 Rh6CG278300 Rh6CG278400 |
| rosa_wichuraiana | Rw6G023740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 105 |
| AcsI | RAATTY | 1 cut(s) | 101 |
| AcuI | CTGAAG | 1 cut(s) | 222 |
| AfaI | GTAC | 1 cut(s) | 36 |
| AluBI | AGCT | 1 cut(s) | 181 |
| AluI | AGCT | 1 cut(s) | 181 |
| Alw21I | GWGCWC | 1 cut(s) | 183 |
| Aor13HI | TCCGGA | 1 cut(s) | 105 |
| ApoI | RAATTY | 1 cut(s) | 101 |
| BanII | GRGCYC | 1 cut(s) | 183 |
| Bbv12I | GWGCWC | 1 cut(s) | 183 |
| BfaI | CTAG | 1 cut(s) | 30 |
| BmsI | GCATC | 1 cut(s) | 16 |
| BpuEI | CTTGAG | 1 cut(s) | 197 |
| BsaWI | WCCGGW | 1 cut(s) | 105 |
| BseAI | TCCGGA | 1 cut(s) | 105 |
| BseGI | GGATG | 1 cut(s) | 25 |
| BseMII | CTCAG | 1 cut(s) | 133 |
| BsiHKAI | GWGCWC | 1 cut(s) | 183 |
| BsiSI | CCGG | 1 cut(s) | 106 |
| Bsp1286I | GDGCHC | 1 cut(s) | 183 |
| Bsp13I | TCCGGA | 1 cut(s) | 105 |
| Bsp143I | GATC | 1 cut(s) | 91 |
| BspCNI | CTCAG | 1 cut(s) | 132 |
| BspEI | TCCGGA | 1 cut(s) | 105 |
| BssMI | GATC | 1 cut(s) | 91 |
| BstDEI | CTNAG | 1 cut(s) | 119 |
| BstF5I | GGATG | 1 cut(s) | 25 |
| BstKTI | GATC | 1 cut(s) | 94 |
| BstMBI | GATC | 1 cut(s) | 91 |
| BtsCI | GGATG | 1 cut(s) | 25 |
| Csp6I | GTAC | 1 cut(s) | 35 |
| CviJI | RGCY | 2 cut(s) | 44, 181 |
| CviKI_1 | RGCY | 2 cut(s) | 44, 181 |
| CviQI | GTAC | 1 cut(s) | 35 |
| DdeI | CTNAG | 1 cut(s) | 119 |
| DpnI | GATC | 1 cut(s) | 93 |
| DpnII | GATC | 1 cut(s) | 91 |
| Ecl136II | GAGCTC | 1 cut(s) | 181 |
| Eco24I | GRGCYC | 1 cut(s) | 183 |
| Eco53kI | GAGCTC | 1 cut(s) | 181 |
| Eco57I | CTGAAG | 1 cut(s) | 222 |
| EcoICRI | GAGCTC | 1 cut(s) | 181 |
| EcoT38I | GRGCYC | 1 cut(s) | 183 |
| FaiI | YATR | 1 cut(s) | 66 |
| FokI | GGATG | 1 cut(s) | 32 |
| FriOI | GRGCYC | 1 cut(s) | 183 |
| FspBI | CTAG | 1 cut(s) | 30 |
| HapII | CCGG | 1 cut(s) | 106 |
| HinfI | GANTC | 2 cut(s) | 85, 117 |
| HpaII | CCGG | 1 cut(s) | 106 |
| Hpy188I | TCNGA | 1 cut(s) | 139 |
| Hpy188III | TCNNGA | 4 cut(s) | 89, 95, 106, 176 |
| Hpy99I | CGWCG | 1 cut(s) | 42 |
| HpyAV | CCTTC | 1 cut(s) | 55 |
| HpyCH4V | TGCA | 1 cut(s) | 80 |
| HpyF3I | CTNAG | 1 cut(s) | 119 |
| Kpn2I | TCCGGA | 1 cut(s) | 105 |
| Kzo9I | GATC | 1 cut(s) | 91 |
| LpnPI | CCDG | 2 cut(s) | 119, 192 |
| LweI | GCATC | 1 cut(s) | 16 |
| MaeI | CTAG | 1 cut(s) | 30 |
| MalI | GATC | 1 cut(s) | 93 |
| MboI | GATC | 1 cut(s) | 91 |
| MboII | GAAGA | 2 cut(s) | 121, 162 |
| MhlI | GDGCHC | 1 cut(s) | 183 |
| MluCI | AATT | 1 cut(s) | 101 |
| MlyI | GAGTC | 1 cut(s) | 111 |
| MmeI | TCCRAC | 2 cut(s) | 49, 127 |
| MnlI | CCTC | 1 cut(s) | 155 |
| MroI | TCCGGA | 1 cut(s) | 105 |
| MspI | CCGG | 1 cut(s) | 106 |
| NdeII | GATC | 1 cut(s) | 91 |
| PfeI | GAWTC | 1 cut(s) | 85 |
| PleI | GAGTC | 1 cut(s) | 111 |
| PpsI | GAGTC | 1 cut(s) | 111 |
| Psp124BI | GAGCTC | 1 cut(s) | 183 |
| RsaI | GTAC | 1 cut(s) | 36 |
| RsaNI | GTAC | 1 cut(s) | 35 |
| SacI | GAGCTC | 1 cut(s) | 183 |
| Sau3AI | GATC | 1 cut(s) | 91 |
| SchI | GAGTC | 1 cut(s) | 111 |
| SduI | GDGCHC | 1 cut(s) | 183 |
| SetI | ASST | 1 cut(s) | 183 |
| SfaNI | GCATC | 1 cut(s) | 16 |
| SgeI | CNNG | 7 cut(s) | 42, 53, 101, 107, 118, 148, 188 |
| SmlI | CTYRAG | 1 cut(s) | 176 |
| SmoI | CTYRAG | 1 cut(s) | 176 |
| Sse9I | AATT | 1 cut(s) | 101 |
| SspMI | CTAG | 1 cut(s) | 30 |
| SstI | GAGCTC | 1 cut(s) | 183 |
| TasI | AATT | 1 cut(s) | 101 |
| TfiI | GAWTC | 1 cut(s) | 85 |
| TspGWI | ACGGA | 1 cut(s) | 117 |
| XapI | RAATTY | 1 cut(s) | 101 |
| XspI | CTAG | 1 cut(s) | 30 |