Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007302.1

Orthogroup ID

OG0004715

Physical Location & Seq

Genomic Coordinates Reverse (-)

799 .. 10275

Gene Structure 9477 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1944 bp

ctgcatccctccaacgggtcgcccacgacgccggctctcgccattgccgcggcgaaactcgtcatcgtgctctccgcggccaggcttgacgccaagccgacggtcctcttcgctgagaagctcggcgaggcctggttggaccttctgaaggaatcgacgaccgccagtagaatcgggtacgtcttcgatttgcttctgtctctctcgccggcgactgatcatcacggaaatcgcaacttgattgtatttcctgtcccgggctgcaatcggagtcaaatcagtgcaaaggaaaacgagtttcctggacatctgacgaacaaaactggcgaagcccagaggggttgggatcgtggagttggatggcgtcatcctctggtggtccgacggtgggacaaagcagcggcggcggaggccgacatcgacgatcctccctttttccgggttcggatcctccgatccgcctccgccgtcgccactgtctcgccgcgactctcagatccttcagggcatggacttctgactgccgcacgcttaacgagtttcgtttgtgtcatggattcggataatttggaagccgcctatgggcttcaggttgctcttgaaaatggtggtcatgggcaacctagtgttggtccggacggcgttaatgggagtgccggtgaaactactcttaccgagactgcagcacccaatgggagaattgaaaatgtggtgaactcggatgatggtgtgtcttataattcatctgctggagaagtcaaagaggaatccagtgtcaactctgcaagcaatggtttgactattgctaaggaaaggggaccgaaagtttctgttcagtcaaagcaatccagagtgcagaagggtcaaggtaagagtaagattgagaagccccctagtcccaagagcgccttgccaattcggatgaagaaaagcaaagatggaaatgatgcagaggctacagctactgtttccaatggttcagcaggtccaaattcactcgccaagcagcctaacaagagtagatcattgaatggccaacaggttcagttatccaatcagcaacctaaacaatctgaggcaccatcgactgaaggccttgtggaggagacaaatctgaagccgctaaacaaaggctcctataataaggctgatggagactcccaatcttctttaagtcccacagaaggagatatgaaagcacctagggtgggtacactgccaaagtatggtttcagctttaagtgtgatgaaagagctgagaaaagaagagagttctacaccaaacttgaggaaaagatacatgcaaaggagatggagaagaataatttgcaagccaagtctaaggaaactctagaagctgagattaagatgctcaggaagaagctgacttttaaagcaactccaatgccaagcttttatcaggagcctccgcctcctaaggtggagctaaagaagttaccaacaacaagagccaagtctcccaagctcggccgcaggaagagcttacctccagcagattctggaggaaacagtaataccaagagtcaatctggcaggcttagtctgggtgagaaacttcctcaaaactctgccaaaggaccttctcctgtgcatccaaagaagccacaaagaaagtctcttcctagacttccatctgagaagaccactttatctaatgtgaagagtgtgcggaaggttgcttcaaaggcaacaaacgaggaaaaggctgccgcgttgcccaatgcaacaagtgaagctggacctcacacccaagagcaggaggcagttcccagagctgagataactgaaccctacagccaagagccggaagcagttcccagggctgcaataagtgaggagcagtcccattcagatgatgagacagttaatgaagaggaacatcatcccaccttggttcaagagcctatagcgctggagaattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0008017 GO:0008092 GO:0008150 GO:0009719 GO:0009723 GO:0009725 GO:0009987 GO:0010033 GO:0015631 GO:0032870 GO:0042221 GO:0050896 GO:0051716 GO:0070887 GO:0071310 GO:0071369 GO:0071495

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPX2

Protein Analysis

647

Amino Acids

69.57

Weight (kDa)

9.17

Isoelectric Point (pI)

50.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPX2	PF06886	411 - 481	7.4e-27	Targeting protein for Xklp2 (TPX2) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004715)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25480 AT2G25480 AT4G32330 AT4G32330 AT4G32330 AT4G32330
fragaria_vesca	FvH4_2g29090 FvH4_2g29090 FvH4_2g29090
malus_domestica	MD08G1150300.v1.1 MD15G1125300.v1.1
prunus_persica	Prupe.1G480800_v2.0.a1
pyrus_communis	pycom08g12610 pycom15g11290
rosa_chinensis	RchiOBHm_Chr6g0297971
rosa_laevigata	RLG00000011547
rosa_multiflora	Rmu_co8198748.1_g000001 Rmu_sc0007302.1_g000001
rosa_roxburghii	Rroxscaffold_7G00170040 Rroxscaffold_7G00178880
rosa_rugosa	Rorug06G0277200 Rorug06G0277300 Rorug06G0277400 Rorug06G0277500
rosa_samantha	Rh6AG387800 Rh6AG387900 Rh6BG396100 Rh6CG402100 Rh6DG388300
rosa_wichuraiana	Rw6G033780 Rw6G033850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	738
Acc36I	ACCTGC	1 cut(s)	974
AccB1I	GGYRCC	1 cut(s)	1078
AccB7I	CCANNNNNTGG	1 cut(s)	1226
AccII	CGCG	4 cut(s)	50, 77, 487, 1733
AccIII	TCCGGA	1 cut(s)	634
AclWI	GGATC	6 cut(s)	354, 419, 442, 450, 455, 491
AcoI	YGGCCR	3 cut(s)	78, 1033, 1489
AcsI	RAATTY	1 cut(s)	991
AcuI	CTGAAG	5 cut(s)	167, 486, 572, 1110, 1136
AcyI	GRCGYC	3 cut(s)	29, 90, 364
AfaI	GTAC	2 cut(s)	179, 1213
AfeI	AGCGCT	1 cut(s)	1932
AgsI	TTSAA	5 cut(s)	602, 704, 1030, 1704, 1919
AjnI	CCWGG	4 cut(s)	80, 131, 301, 1838
Alw21I	GWGCWC	1 cut(s)	72
Alw26I	GTCTC	8 cut(s)	204, 484, 671, 1100, 1149, 1482, 1641, 1874
AlwI	GGATC	6 cut(s)	354, 419, 442, 450, 455, 491
AlwNI	CAGNNNCTG	2 cut(s)	965, 1520
Ama87I	CYCGRG	1 cut(s)	256
Aor13HI	TCCGGA	1 cut(s)	634
Aor51HI	AGCGCT	1 cut(s)	1932
AoxI	GGCC	6 cut(s)	78, 129, 411, 1033, 1093, 1489
ApeKI	GCWGC	6 cut(s)	261, 398, 683, 1006, 1727, 1844
ApoI	RAATTY	1 cut(s)	991
Asp700I	GAANNNNTTC	1 cut(s)	1833
AspA2I	CCTAGG	1 cut(s)	1202
AspLEI	GCGC	2 cut(s)	908, 1933
AspS9I	GGNCC	8 cut(s)	103, 139, 379, 632, 818, 986, 1598, 1760
AsuC2I	CCSGG	3 cut(s)	257, 258, 440
AsuHPI	GGTGA	3 cut(s)	671, 724, 1580
AvaI	CYCGRG	1 cut(s)	256
AvaII	GGWCC	8 cut(s)	103, 139, 379, 632, 818, 986, 1598, 1760
AvrII	CCTAGG	1 cut(s)	1202
AxyI	CCTNAGG	1 cut(s)	1437
BalI	TGGCCA	1 cut(s)	1035
BamHI	GGATCC	1 cut(s)	447
BanI	GGYRCC	1 cut(s)	1078
BbsI	GAAGAC	2 cut(s)	175, 1667
Bbv12I	GWGCWC	1 cut(s)	72
BbvI	GCAGC	6 cut(s)	248, 410, 695, 1018, 1714, 1831
BccI	CCATC	7 cut(s)	354, 719, 932, 1090, 1145, 1306, 1660
BceAI	ACGGC	2 cut(s)	452, 655
BciT130I	CCWGG	4 cut(s)	82, 133, 303, 1840
BclI	TGATCA	1 cut(s)	217
BcnI	CCSGG	3 cut(s)	257, 258, 440
BcoDI	GTCTC	8 cut(s)	204, 484, 671, 1100, 1149, 1482, 1641, 1874
BfaI	CTAG	5 cut(s)	624, 894, 1203, 1352, 1644
BfmI	CTRYAG	4 cut(s)	681, 957, 1813, 1926
BfoI	RGCGCY	2 cut(s)	909, 1934
BfuAI	ACCTGC	1 cut(s)	974
BlnI	CCTAGG	1 cut(s)	1202
Bme1390I	CCNGG	7 cut(s)	82, 133, 257, 258, 303, 440, 1840
Bme18I	GGWCC	8 cut(s)	103, 139, 379, 632, 818, 986, 1598, 1760
BmeT110I	CYCGRG	1 cut(s)	256
BmgT120I	GGNCC	8 cut(s)	103, 139, 379, 632, 818, 986, 1598, 1760
BmiI	GGNNCC	5 cut(s)	449, 819, 1080, 1135, 1425
BmrFI	CCNGG	7 cut(s)	82, 133, 257, 258, 303, 440, 1840
BmsI	GCATC	4 cut(s)	13, 937, 1359, 1621
BpiI	GAAGAC	2 cut(s)	175, 1667
BplI	GAGNNNNNCTC	2 cut(s)	1492, 1524
BpmI	CTGGAG	3 cut(s)	771, 1494, 1542
Bpu10I	CCTNAGC	2 cut(s)	807, 1373
BpuEI	CTTGAG	1 cut(s)	1307
BpuMI	CCSGG	3 cut(s)	257, 258, 440
BsaHI	GRCGYC	3 cut(s)	29, 90, 364
BsaJI	CCNNGG	7 cut(s)	48, 75, 256, 1202, 1838, 1839, 1911
BsaWI	WCCGGW	1 cut(s)	634
BsaXI	ACNNNNNCTCC	4 cut(s)	643, 673, 1118, 1148
Bse118I	RCCGGY	3 cut(s)	31, 208, 656
Bse1I	ACTGG	3 cut(s)	165, 328, 771
Bse21I	CCTNAGG	1 cut(s)	1437
Bse3DI	GCAATG	2 cut(s)	42, 796
BseAI	TCCGGA	1 cut(s)	634
BseBI	CCWGG	4 cut(s)	82, 133, 303, 1840
BseDI	CCNNGG	7 cut(s)	48, 75, 256, 1202, 1838, 1839, 1911
BseGI	GGATG	7 cut(s)	4, 365, 367, 727, 927, 1612, 1903
BseMI	GCAATG	2 cut(s)	42, 796
BseMII	CTCAG	8 cut(s)	105, 507, 1065, 1248, 1350, 1387, 1647, 1788
BseNI	ACTGG	3 cut(s)	165, 328, 771
BseRI	GAGGAG	2 cut(s)	1118, 1871
BseX3I	CGGCCG	1 cut(s)	1489
BseXI	GCAGC	6 cut(s)	248, 410, 695, 1018, 1714, 1831
BsgI	GTGCAG	1 cut(s)	875
Bsh1236I	CGCG	4 cut(s)	50, 77, 487, 1733
Bsh1285I	CGRYCG	2 cut(s)	162, 1492
BshFI	GGCC	6 cut(s)	80, 131, 413, 1035, 1095, 1491
BshNI	GGYRCC	1 cut(s)	1078
BsiEI	CGRYCG	2 cut(s)	162, 1492
BsiHKAI	GWGCWC	1 cut(s)	72
BsiHKCI	CYCGRG	1 cut(s)	256
BsiSI	CCGG	7 cut(s)	32, 209, 257, 439, 635, 657, 1826
BslFI	GGGAC	6 cut(s)	239, 404, 831, 882, 1161, 1849
BsmAI	GTCTC	8 cut(s)	204, 484, 671, 1100, 1149, 1482, 1641, 1874
BsmFI	GGGAC	6 cut(s)	239, 404, 831, 882, 1161, 1849
BsnI	GGCC	6 cut(s)	80, 131, 413, 1035, 1095, 1491
BsoBI	CYCGRG	1 cut(s)	256
Bsp1286I	GDGCHC	1 cut(s)	72
Bsp13I	TCCGGA	1 cut(s)	634
Bsp143I	GATC	7 cut(s)	217, 346, 424, 447, 455, 496, 1022
BspANI	GGCC	6 cut(s)	80, 131, 413, 1035, 1095, 1491
BspCNI	CTCAG	8 cut(s)	106, 506, 1066, 1249, 1351, 1386, 1648, 1789
BspEI	TCCGGA	1 cut(s)	634
BspFNI	CGCG	4 cut(s)	50, 77, 487, 1733
BspLI	GGNNCC	5 cut(s)	449, 819, 1080, 1135, 1425
BspMAI	CTGCAG	1 cut(s)	685
BspMI	ACCTGC	1 cut(s)	974
BspPI	GGATC	6 cut(s)	354, 419, 442, 450, 455, 491
BspQI	GCTCTTC	1 cut(s)	1493
BspT107I	GGYRCC	1 cut(s)	1078
BsrDI	GCAATG	2 cut(s)	42, 796
BsrFI	RCCGGY	3 cut(s)	31, 208, 656
BsrI	ACTGG	3 cut(s)	165, 328, 771
BssAI	RCCGGY	3 cut(s)	31, 208, 656
BssECI	CCNNGG	7 cut(s)	48, 75, 256, 1202, 1838, 1839, 1911
BssMI	GATC	7 cut(s)	217, 346, 424, 447, 455, 496, 1022
BssNI	GRCGYC	3 cut(s)	29, 90, 364
BssT1I	CCWWGG	2 cut(s)	1202, 1911
Bst2UI	CCWGG	4 cut(s)	82, 133, 303, 1840
Bst4CI	ACNGT	6 cut(s)	103, 387, 478, 967, 1532, 1885
Bst6I	CTCTTC	6 cut(s)	113, 1261, 1493, 1644, 1676, 1887
BstACI	GRCGYC	3 cut(s)	29, 90, 364
BstC8I	GCNNGC	6 cut(s)	33, 210, 529, 787, 1332, 1556
BstDSI	CCRYGG	2 cut(s)	48, 75
BstENI	CCTNNNNNAGG	2 cut(s)	146, 1100
BstF5I	GGATG	7 cut(s)	4, 365, 367, 727, 927, 1612, 1903
BstFNI	CGCG	4 cut(s)	50, 77, 487, 1733
BstH2I	RGCGCY	2 cut(s)	909, 1934
BstHHI	GCGC	2 cut(s)	908, 1933
BstKTI	GATC	7 cut(s)	220, 349, 427, 450, 458, 499, 1025
BstMAI	GTCTC	8 cut(s)	204, 484, 671, 1100, 1149, 1482, 1641, 1874
BstMBI	GATC	7 cut(s)	217, 346, 424, 447, 455, 496, 1022
BstMCI	CGRYCG	2 cut(s)	162, 1492
BstMWI	GCNNNNNNNGC	7 cut(s)	28, 47, 404, 410, 1500, 1706, 1930
BstNI	CCWGG	4 cut(s)	82, 133, 303, 1840
BstNSI	RCATGY	1 cut(s)	1304
BstSCI	CCNGG	7 cut(s)	80, 131, 255, 256, 301, 438, 1838
BstSFI	CTRYAG	4 cut(s)	681, 957, 1813, 1926
BstUI	CGCG	4 cut(s)	50, 77, 487, 1733
BstV1I	GCAGC	6 cut(s)	248, 410, 695, 1018, 1714, 1831
BstV2I	GAAGAC	2 cut(s)	175, 1667
BstX2I	RGATCY	2 cut(s)	447, 496
BstYI	RGATCY	2 cut(s)	447, 496
BstZI	CGGCCG	1 cut(s)	1489
Bsu36I	CCTNAGG	1 cut(s)	1437
BsuRI	GGCC	6 cut(s)	80, 131, 413, 1035, 1095, 1491
BtgI	CCRYGG	2 cut(s)	48, 75
BtsCI	GGATG	7 cut(s)	4, 365, 367, 727, 927, 1612, 1903
BtsI	GCAGTG	1 cut(s)	1214
BtsIMutI	CAGTG	4 cut(s)	286, 474, 778, 1214
BveI	ACCTGC	1 cut(s)	974
Cac8I	GCNNGC	6 cut(s)	33, 210, 529, 787, 1332, 1556
CaiI	CAGNNNCTG	2 cut(s)	965, 1520
CfoI	GCGC	2 cut(s)	908, 1933
Cfr10I	RCCGGY	3 cut(s)	31, 208, 656
Cfr13I	GGNCC	8 cut(s)	103, 139, 379, 632, 818, 986, 1598, 1760
Cfr42I	CCGCGG	2 cut(s)	51, 78
Cfr9I	CCCGGG	1 cut(s)	256
CseI	GACGC	3 cut(s)	37, 98, 353
Csp6I	GTAC	2 cut(s)	178, 1212
CviAII	CATG	4 cut(s)	509, 553, 614, 1301
CviQI	GTAC	2 cut(s)	178, 1212
DpnI	GATC	7 cut(s)	219, 348, 426, 449, 457, 498, 1024
DpnII	GATC	7 cut(s)	217, 346, 424, 447, 455, 496, 1022
DraI	TTTAAA	1 cut(s)	1393
EaeI	YGGCCR	3 cut(s)	78, 1033, 1489
EagI	CGGCCG	1 cut(s)	1489
Eam1104I	CTCTTC	6 cut(s)	113, 1261, 1493, 1644, 1676, 1887
EarI	CTCTTC	6 cut(s)	113, 1261, 1493, 1644, 1676, 1887
EciI	GGCGGA	4 cut(s)	422, 448, 454, 1419
EclXI	CGGCCG	1 cut(s)	1489
Eco130I	CCWWGG	2 cut(s)	1202, 1911
Eco147I	AGGCCT	2 cut(s)	131, 1095
Eco47I	GGWCC	8 cut(s)	103, 139, 379, 632, 818, 986, 1598, 1760
Eco47III	AGCGCT	1 cut(s)	1932
Eco52I	CGGCCG	1 cut(s)	1489
Eco57I	CTGAAG	5 cut(s)	167, 486, 572, 1110, 1136
Eco81I	CCTNAGG	1 cut(s)	1437
Eco88I	CYCGRG	1 cut(s)	256
EcoNI	CCTNNNNNAGG	2 cut(s)	146, 1100
EcoO109I	RGGNCCY	1 cut(s)	1598
EcoRII	CCWGG	4 cut(s)	80, 131, 301, 1838
EcoT14I	CCWWGG	2 cut(s)	1202, 1911
ErhI	CCWWGG	2 cut(s)	1202, 1911
FaeI	CATG	4 cut(s)	512, 556, 617, 1304
FalI	AAGNNNNNCTT	2 cut(s)	893, 925
FaqI	GGGAC	6 cut(s)	239, 404, 831, 882, 1161, 1849
FatI	CATG	4 cut(s)	508, 552, 613, 1300
FbaI	TGATCA	1 cut(s)	217
FokI	GGATG	6 cut(s)	354, 372, 734, 934, 1599, 1890
FspBI	CTAG	5 cut(s)	624, 894, 1203, 1352, 1644
GlaI	GCGC	2 cut(s)	907, 1932
GsuI	CTGGAG	3 cut(s)	771, 1494, 1542
HaeII	RGCGCY	2 cut(s)	909, 1934
HaeIII	GGCC	6 cut(s)	80, 131, 413, 1035, 1095, 1491
HapII	CCGG	7 cut(s)	32, 209, 257, 439, 635, 657, 1826
HgaI	GACGC	3 cut(s)	37, 98, 353
HhaI	GCGC	2 cut(s)	908, 1933
Hin1I	GRCGYC	3 cut(s)	29, 90, 364
Hin1II	CATG	4 cut(s)	512, 556, 617, 1304
Hin6I	GCGC	2 cut(s)	906, 1931
HinP1I	GCGC	2 cut(s)	906, 1931
HincII	GTYRAC	1 cut(s)	778
HindII	GTYRAC	1 cut(s)	778
HindIII	AAGCTT	1 cut(s)	1411
HinfI	GANTC	9 cut(s)	152, 171, 271, 489, 557, 767, 1157, 1517, 1543
HpaII	CCGG	7 cut(s)	32, 209, 257, 439, 635, 657, 1826
HphI	GGTGA	3 cut(s)	671, 724, 1580
Hpy166II	GTNNAC	3 cut(s)	715, 778, 1214
Hpy188III	TCNNGA	8 cut(s)	599, 635, 849, 1352, 1375, 1421, 1521, 1919
Hpy8I	GTNNAC	3 cut(s)	715, 778, 1214
Hpy99I	CGWCG	6 cut(s)	31, 103, 160, 387, 425, 473
HpyAV	CCTTC	8 cut(s)	142, 152, 510, 853, 1085, 1178, 1611, 1687
HpyCH4III	ACNGT	6 cut(s)	103, 387, 478, 967, 1532, 1885
HpyCH4IV	ACGT	1 cut(s)	180
HpyF10VI	GCNNNNNNNGC	7 cut(s)	28, 47, 404, 410, 1500, 1706, 1930
HpySE526I	ACGT	1 cut(s)	180
Hsp92I	GRCGYC	3 cut(s)	29, 90, 364
Hsp92II	CATG	4 cut(s)	512, 556, 617, 1304
HspAI	GCGC	2 cut(s)	906, 1931
Kpn2I	TCCGGA	1 cut(s)	634
KroI	GCCGGC	2 cut(s)	31, 208
KroNI	GCCGGC	2 cut(s)	33, 210
Ksp22I	TGATCA	1 cut(s)	217
KspI	CCGCGG	2 cut(s)	51, 78
Kzo9I	GATC	7 cut(s)	217, 346, 424, 447, 455, 496, 1022
LguI	GCTCTTC	1 cut(s)	1493
LmnI	GCTCC	4 cut(s)	1139, 1423, 1444, 1858
Lsp1109I	GCAGC	6 cut(s)	248, 410, 695, 1018, 1714, 1831
LweI	GCATC	4 cut(s)	13, 937, 1359, 1621
MaeI	CTAG	5 cut(s)	624, 894, 1203, 1352, 1644
MaeII	ACGT	1 cut(s)	180
MaeIII	GTNAC	1 cut(s)	1455
MalI	GATC	7 cut(s)	219, 348, 426, 449, 457, 498, 1024
MboI	GATC	7 cut(s)	217, 346, 424, 447, 455, 496, 1022
MflI	RGATCY	2 cut(s)	447, 496
MhlI	GDGCHC	1 cut(s)	72
MlsI	TGGCCA	1 cut(s)	1035
MluCI	AATT	7 cut(s)	565, 699, 739, 915, 991, 1324, 1939
MluNI	TGGCCA	1 cut(s)	1035
MlyI	GAGTC	4 cut(s)	280, 483, 1151, 1552
MmeI	TCCRAC	4 cut(s)	36, 117, 337, 406
Mox20I	TGGCCA	1 cut(s)	1035
MreI	CGCCGGCG	1 cut(s)	208
MroI	TCCGGA	1 cut(s)	634
MroNI	GCCGGC	2 cut(s)	31, 208
MroXI	GAANNNNTTC	1 cut(s)	1833
MscI	TGGCCA	1 cut(s)	1035
MseI	TTAA	7 cut(s)	533, 645, 1172, 1239, 1365, 1392, 1887
MslI	CAYNNNNRTG	1 cut(s)	1872
Msp20I	TGGCCA	1 cut(s)	1035
MspA1I	CMGCKG	3 cut(s)	50, 77, 401
MspI	CCGG	7 cut(s)	32, 209, 257, 439, 635, 657, 1826
MspR9I	CCNGG	7 cut(s)	82, 133, 257, 258, 303, 440, 1840
MvaI	CCWGG	4 cut(s)	82, 133, 303, 1840
MvnI	CGCG	4 cut(s)	50, 77, 487, 1733
MwoI	GCNNNNNNNGC	7 cut(s)	28, 47, 404, 410, 1500, 1706, 1930
NaeI	GCCGGC	2 cut(s)	33, 210
NciI	CCSGG	3 cut(s)	257, 258, 440
NdeII	GATC	7 cut(s)	217, 346, 424, 447, 455, 496, 1022
NgoMIV	GCCGGC	2 cut(s)	31, 208
NlaIII	CATG	4 cut(s)	512, 556, 617, 1304
NlaIV	GGNNCC	5 cut(s)	449, 819, 1080, 1135, 1425
NmeAIII	GCCGAG	2 cut(s)	102, 1467
NspI	RCATGY	1 cut(s)	1304
PasI	CCCWGGG	1 cut(s)	1839
PceI	AGGCCT	2 cut(s)	131, 1095
PciSI	GCTCTTC	1 cut(s)	1493
PcsI	WCGNNNNNNNCGW	1 cut(s)	451
PdiI	GCCGGC	2 cut(s)	33, 210
PdmI	GAANNNNTTC	1 cut(s)	1833
PfeI	GAWTC	5 cut(s)	152, 171, 557, 767, 1517
PflMI	CCANNNNNTGG	1 cut(s)	1226
PfoI	TCCNGGA	1 cut(s)	301
PleI	GAGTC	4 cut(s)	279, 483, 1151, 1551
PpsI	GAGTC	4 cut(s)	279, 483, 1151, 1551
PpuMI	RGGWCCY	1 cut(s)	1598
PsiI	TTATAA	1 cut(s)	738
Psp5II	RGGWCCY	1 cut(s)	1598
Psp6I	CCWGG	4 cut(s)	80, 131, 301, 1838
PspGI	CCWGG	4 cut(s)	80, 131, 301, 1838
PspN4I	GGNNCC	5 cut(s)	449, 819, 1080, 1135, 1425
PspPI	GGNCC	8 cut(s)	103, 139, 379, 632, 818, 986, 1598, 1760
PspPPI	RGGWCCY	1 cut(s)	1598
PstI	CTGCAG	1 cut(s)	685
PstNI	CAGNNNCTG	2 cut(s)	965, 1520
PsuI	RGATCY	2 cut(s)	447, 496
RsaI	GTAC	2 cut(s)	179, 1213
RsaNI	GTAC	2 cut(s)	178, 1212
RseI	CAYNNNNRTG	1 cut(s)	1872
SacII	CCGCGG	2 cut(s)	51, 78
SapI	GCTCTTC	1 cut(s)	1493
SaqAI	TTAA	7 cut(s)	533, 645, 1172, 1239, 1365, 1392, 1887
Sau3AI	GATC	7 cut(s)	217, 346, 424, 447, 455, 496, 1022
Sau96I	GGNCC	8 cut(s)	103, 139, 379, 632, 818, 986, 1598, 1760
SchI	GAGTC	4 cut(s)	280, 483, 1151, 1552
ScrFI	CCNGG	7 cut(s)	82, 133, 257, 258, 303, 440, 1840
SduI	GDGCHC	1 cut(s)	72
SfaNI	GCATC	4 cut(s)	13, 937, 1359, 1621
SfcI	CTRYAG	4 cut(s)	681, 957, 1813, 1926
Sfr303I	CCGCGG	2 cut(s)	51, 78
SgrAI	CRCCGGYG	1 cut(s)	208
SgrBI	CCGCGG	2 cut(s)	51, 78
SinI	GGWCC	8 cut(s)	103, 139, 379, 632, 818, 986, 1598, 1760
SmaI	CCCGGG	1 cut(s)	258
SmiMI	CAYNNNNRTG	1 cut(s)	1872
SmlI	CTYRAG	1 cut(s)	1286
SmoI	CTYRAG	1 cut(s)	1286
Sse9I	AATT	7 cut(s)	565, 699, 739, 915, 991, 1324, 1939
SseBI	AGGCCT	2 cut(s)	131, 1095
SspMI	CTAG	5 cut(s)	624, 894, 1203, 1352, 1644
StuI	AGGCCT	2 cut(s)	131, 1095
StyD4I	CCNGG	7 cut(s)	80, 131, 255, 256, 301, 438, 1838
StyI	CCWWGG	2 cut(s)	1202, 1911
TaaI	ACNGT	6 cut(s)	103, 387, 478, 967, 1532, 1885
TaiI	ACGT	1 cut(s)	183
TaqI	TCGA	4 cut(s)	155, 186, 420, 1085
TaqII	GACCGA	1 cut(s)	835
TasI	AATT	7 cut(s)	565, 699, 739, 915, 991, 1324, 1939
TfiI	GAWTC	5 cut(s)	152, 171, 557, 767, 1517
Tru1I	TTAA	7 cut(s)	533, 645, 1172, 1239, 1365, 1392, 1887
Tru9I	TTAA	7 cut(s)	533, 645, 1172, 1239, 1365, 1392, 1887
TscAI	CASTG	4 cut(s)	286, 481, 778, 1221
TseI	GCWGC	6 cut(s)	261, 398, 683, 1006, 1727, 1844
TspDTI	ATGAA	5 cut(s)	732, 938, 1208, 1263, 1905
TspGWI	ACGGA	1 cut(s)	240
TspMI	CCCGGG	1 cut(s)	256
TspRI	CASTG	4 cut(s)	286, 481, 778, 1221
Van91I	CCANNNNNTGG	1 cut(s)	1226
VpaK11BI	GGWCC	8 cut(s)	103, 139, 379, 632, 818, 986, 1598, 1760
XagI	CCTNNNNNAGG	2 cut(s)	146, 1100
XapI	RAATTY	1 cut(s)	991
XbaI	TCTAGA	1 cut(s)	1351
XceI	RCATGY	1 cut(s)	1304
XmaI	CCCGGG	1 cut(s)	256
XmaJI	CCTAGG	1 cut(s)	1202
XmnI	GAANNNNTTC	1 cut(s)	1833
XspI	CTAG	5 cut(s)	624, 894, 1203, 1352, 1644

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.