Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0004715

Physical Location & Seq

Genomic Coordinates Forward (+)

62408009 .. 62421412

Gene Structure 13404 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG396100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2490 bp

ATGGCATCATCATCAACTACCTCCACCGCCGTCTCCCTCCTCTGCTCCGCAACCTCTTCCTCCAGATTTCCATTCAGTACAACTCTTCCCGCCAAATCCTCATCAACGCTCAATTTTCGCGCCAACTCTCTCCCCGCCACCCATGCAGCAGCTTCGTCTTCTTCAGGTAAAGATGAGATTTTGGGGAGAAGAGGACTGGTGTTCACACTCACAGCCACACTGCCATTGCTTCTTCCTTTCTCGGAATCCATGGAGGCCTTTACAGCCAAGGCGGTGGAGCCAGATACAAGTGTATATGAGGTTATGAAGGAAGAGATTAGGAAAGTTGTGTCTAAGGGCAAAGCTGCTGGTGTGCTTCGTTTTGTATTTCATGATGCAGGGACCTTTCAATTGGATGACAATTCGGGTGGCATGAATGGTTCAGTCATATATGAACTCGATAGACCCGAAAATAAAGGTCTTAAAACTCCTTTTAAGATTTTAGAGAAAGCAAAGACTGAGGTGGATGCAGTACAACCAGTATCGTGGGCAGACATGATTGCTGTGGCTGGAGCTGAAGCAGTTTCAGTATGTGGAGGTCCGACTATCCCAGTTGCATTGGGCAGACTAGACTCAAAGGAGCCTGATCCTGAAGGAAAACTTCCTGAAGAAACTCTTGATGCTTATGGTCTAAAGCAAAGCTTTCGAGCAAAAGGCTTATCAACTCAAGAACTTGTTGCTCTGTCAGGTGCCCATACTCTGGGAAATAAAGGTTTTGGAAGCCCAACTGTTTTTGACAATTCATACTTCAAAGTTCTTCTTGAGGAATCTGTGTCCTCAGGTAGTATGTCAAGCATGACTGGACTTCCTTCAGATCGCGCACTTCCCAAGGATGATGAATGCTTAAGATGGATAAAAAAGTATGCCGACAATGAGAACAGTTTCTTTGAAGATTTTGAAAAGGCTTACACCAAGTTGGTCAATTCAGGAGCAAGGCAACTTGCCTTGCAAGATCCTCCCTTTTTTCGGGTTCGGATCCTCCGATCCGCCTCCGCCGTCGCCACCGTCTCGCCGCGACTCTCAGATCCTTCAAGGCATGGACTTCTGACTGCCTCACGCTTAACGAGTTTCGTGTGTGTCATGGATTCGGATAATTTGGAAGCCGCCTATGGGCTTCAGGTTGCTCTTGAAAATGGTGGTCATGGGCAACTTAGTGTTGGTCCAGACGGTGAAACTACTCTCACCGAGACTGCAGCACCGAATGGGAGAATTGAAAATGTGGTGAACTTGGATGATGGTGTGTCGTATAATTCATCTGCTGGAGAAGTCAAAGAGGAATCCAGTGTCAACTCTGCAAGCAATGGTTTGACTATTGCTAAGGAAAGGGGACCGAAAGTTTCTGTTCAGTCAAAGCAATCCAAAGTGCAGAAGGGTCAAGGTAAGAGTAAGATTGAGAAGCCCCCTAGTCCCAAGAGCGCCTTGCCAATTCGGATGAAGAAAAGCAAAGATGGAAATGATGCAGAGGCTACAGCTACTGTTTCCAATGGTTCAGCAGGTCCAAATTCACTCGCCAAGCAGCCTAACAAGAGTAGATCATTGAATGGCCAACAGGTTCAGTTATCCAATCAACCTAAACAATCTGAGGCACCATCGACTGAAGGCCTTGTGGAGGAGACAAATCTGAAGCCACTAAACAAAGGCTCCTATAATAAGGCTGATGGAGACTCCCAATCTTCTTTAAGTCCCACGGAAGGAGATATGAAAGCACCTAGGGTGGGTACACTGCCAAAGTATGGTTTCAGCTTTAAGTGTGATGAAAGAGCTGAGAAAAGAAGAGAGTTCTACACCAAACTTGAGGAAAAGATACATGCAAAGGAGATGGAGAAGAATAATTTGCAAGCCAAGTCTAAGGAAACTCTAGAAGCTGAGATTAAGATGCTCAGGAAGAAGCTGACTTTTAAAGCAACTCCAATGCCAAGCTTTTATCAGGAGCCTCCGCCTCCTAAGGTGGAGCTAAAGAAGTTACCAACAACAAGAGCCAAGTCTCCCAAGCTCGGCCGCAGGAAGAGCTTACCTCCAGCAGATTCTGAAGGAAACAGTAATACCAAGAGTCAATCTGGCAGGCTTAGTCTGGGTGAGAAACTTCCTCAAAACTCTGCCAAAGGACCTTCTCCTGTGCATCCAAAGAAGCCACAAAGAAAGTCTCTTCCTAGACTTCCATCTGAGAAGACCACTTTATCTAATGTGAAGAGTGTGTGGAAGGTTACTTCTAAGGCAACAAACGAGGAAAAGGCTGCCGCGTTGCCCAATGCAACAAGTGAAGCTGGACCTCACACCCAAGAGCAGGAGGCAGTTCCCAGAGCTGAGATAACTGAACCCTACACCCAAGAGCCGGAAGCAGTTCCCAGGGCTGCAATAAGTGAGGAGCAGTCCCATTCAGATGATGAGACAGTTAATGAAGAGGAACATCATCCCACCCTGGTTCAAGAGCCTATAGCGCTGGAGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0008017 GO:0008092 GO:0008150 GO:0009719 GO:0009723 GO:0009725 GO:0009987 GO:0010033 GO:0015631 GO:0032870 GO:0042221 GO:0050896 GO:0051716 GO:0070887 GO:0071310 GO:0071369 GO:0071495

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPX2

Protein Analysis

829

Amino Acids

89.23

Weight (kDa)

8.4

Isoelectric Point (pI)

50.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
peroxidase	PF00141	101 - 304	6.9e-42	Peroxidase
TPX2	PF06886	593 - 663	1e-26	Targeting protein for Xklp2 (TPX2) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004715)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25480 AT2G25480 AT4G32330 AT4G32330 AT4G32330 AT4G32330
fragaria_vesca	FvH4_2g29090 FvH4_2g29090 FvH4_2g29090
malus_domestica	MD08G1150300.v1.1 MD15G1125300.v1.1
prunus_persica	Prupe.1G480800_v2.0.a1
pyrus_communis	pycom08g12610 pycom15g11290
rosa_chinensis	RchiOBHm_Chr6g0297971
rosa_laevigata	RLG00000011547
rosa_multiflora	Rmu_co8198748.1_g000001 Rmu_sc0007302.1_g000001
rosa_roxburghii	Rroxscaffold_7G00170040 Rroxscaffold_7G00178880
rosa_rugosa	Rorug06G0277200 Rorug06G0277300 Rorug06G0277400 Rorug06G0277500
rosa_samantha	Rh6AG387800 Rh6AG387900 Rh6BG396100 Rh6CG402100 Rh6DG388300
rosa_wichuraiana	Rw6G033780 Rw6G033850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1523
AccB1I	GGYRCC	2 cut(s)	728, 1624
AccB7I	CCANNNNNTGG	2 cut(s)	739, 1772
AccII	CGCG	4 cut(s)	120, 858, 1054, 2279
AclWI	GGATC	6 cut(s)	620, 986, 1009, 1017, 1022, 1058
AcoI	YGGCCR	2 cut(s)	1582, 2035
AcsI	RAATTY	1 cut(s)	1540
AcuI	CTGAAG	9 cut(s)	147, 576, 651, 666, 834, 1139, 1656, 1682, 2088
AfaI	GTAC	3 cut(s)	79, 513, 1759
AfeI	AGCGCT	1 cut(s)	2478
AflII	CTTAAG	1 cut(s)	883
AgsI	TTSAA	9 cut(s)	389, 790, 929, 938, 1071, 1169, 1253, 1579, 2465
AjnI	CCWGG	2 cut(s)	2384, 2457
Alw26I	GTCTC	8 cut(s)	37, 1051, 1220, 1646, 1695, 2028, 2187, 2420
AlwI	GGATC	6 cut(s)	620, 986, 1009, 1017, 1022, 1058
AlwNI	CAGNNNCTG	2 cut(s)	1514, 2066
Aor51HI	AGCGCT	1 cut(s)	2478
AoxI	GGCC	4 cut(s)	255, 1582, 1639, 2035
ApeKI	GCWGC	7 cut(s)	146, 149, 344, 1232, 1555, 2273, 2390
ApoI	RAATTY	1 cut(s)	1540
Asp700I	GAANNNNTTC	2 cut(s)	920, 2379
AspA2I	CCTAGG	1 cut(s)	1748
AspLEI	GCGC	4 cut(s)	122, 860, 1457, 2479
AspS9I	GGNCC	7 cut(s)	381, 578, 1199, 1367, 1535, 2144, 2306
AsuHPI	GGTGA	4 cut(s)	1213, 1220, 1273, 2126
AvaII	GGWCC	7 cut(s)	381, 578, 1199, 1367, 1535, 2144, 2306
AvrII	CCTAGG	1 cut(s)	1748
AxyI	CCTNAGG	2 cut(s)	817, 1983
BaeGI	GKGCMC	1 cut(s)	733
BaeI	ACNNNNGTAYC	2 cut(s)	276, 309
BalI	TGGCCA	1 cut(s)	1584
BamHI	GGATCC	1 cut(s)	1014
BanI	GGYRCC	2 cut(s)	728, 1624
BbsI	GAAGAC	2 cut(s)	150, 2213
BbvI	GCAGC	7 cut(s)	158, 161, 331, 1244, 1567, 2260, 2377
BccI	CCATC	7 cut(s)	882, 1268, 1481, 1636, 1691, 1852, 2206
BceAI	ACGGC	2 cut(s)	14, 1019
BcgI	CGANNNNNNTGC	4 cut(s)	135, 169, 665, 699
BciT130I	CCWGG	2 cut(s)	2386, 2459
BcoDI	GTCTC	8 cut(s)	37, 1051, 1220, 1646, 1695, 2028, 2187, 2420
BfaI	CTAG	5 cut(s)	608, 1443, 1749, 1898, 2190
BfmI	CTRYAG	3 cut(s)	1230, 1506, 2472
BfoI	RGCGCY	2 cut(s)	1458, 2480
BfrI	CTTAAG	1 cut(s)	883
BfuAI	ACCTGC	1 cut(s)	1523
BlnI	CCTAGG	1 cut(s)	1748
Bme1390I	CCNGG	2 cut(s)	2386, 2459
Bme18I	GGWCC	7 cut(s)	381, 578, 1199, 1367, 1535, 2144, 2306
BmgT120I	GGNCC	7 cut(s)	381, 578, 1199, 1367, 1535, 2144, 2306
BmiI	GGNNCC	9 cut(s)	279, 382, 621, 730, 1016, 1368, 1626, 1681, 1971
BmrFI	CCNGG	2 cut(s)	2386, 2459
BmrI	ACTGGG	1 cut(s)	584
BmsI	GCATC	7 cut(s)	14, 364, 496, 649, 1486, 1905, 2167
BmuI	ACTGGG	1 cut(s)	584
BpiI	GAAGAC	2 cut(s)	150, 2213
BplI	GAGNNNNNCTC	2 cut(s)	2038, 2070
BpmI	CTGGAG	4 cut(s)	46, 570, 1320, 2040
Bpu10I	CCTNAGC	2 cut(s)	1356, 1919
BpuEI	CTTGAG	3 cut(s)	690, 821, 1853
BsaJI	CCNNGG	8 cut(s)	249, 267, 867, 1725, 1748, 2384, 2385, 2457
BsaXI	ACNNNNNCTCC	2 cut(s)	1664, 1694
Bse1I	ACTGG	5 cut(s)	201, 518, 590, 844, 1320
Bse21I	CCTNAGG	2 cut(s)	817, 1983
Bse3DI	GCAATG	2 cut(s)	224, 1345
BseBI	CCWGG	2 cut(s)	2386, 2459
BseDI	CCNNGG	8 cut(s)	249, 267, 867, 1725, 1748, 2384, 2385, 2457
BseGI	GGATG	7 cut(s)	400, 511, 877, 1276, 1476, 2158, 2449
BseMI	GCAATG	2 cut(s)	224, 1345
BseMII	CTCAG	9 cut(s)	489, 831, 1074, 1611, 1794, 1896, 1933, 2193, 2334
BseNI	ACTGG	5 cut(s)	201, 518, 590, 844, 1320
BseRI	GAGGAG	3 cut(s)	29, 1664, 2417
BseSI	GKGCMC	1 cut(s)	733
BseX3I	CGGCCG	1 cut(s)	2035
BseXI	GCAGC	7 cut(s)	158, 161, 331, 1244, 1567, 2260, 2377
BsgI	GTGCAG	1 cut(s)	1424
Bsh1236I	CGCG	4 cut(s)	120, 858, 1054, 2279
Bsh1285I	CGRYCG	1 cut(s)	2038
BshFI	GGCC	4 cut(s)	257, 1584, 1641, 2037
BshNI	GGYRCC	2 cut(s)	728, 1624
BsiEI	CGRYCG	1 cut(s)	2038
BsiSI	CCGG	1 cut(s)	2372
BslFI	GGGAC	5 cut(s)	394, 1380, 1431, 1707, 2395
BsmAI	GTCTC	8 cut(s)	37, 1051, 1220, 1646, 1695, 2028, 2187, 2420
BsmBI	CGTCTC	2 cut(s)	37, 1051
BsmFI	GGGAC	5 cut(s)	394, 1380, 1431, 1707, 2395
BsmI	GAATGC	1 cut(s)	884
BsnI	GGCC	4 cut(s)	257, 1584, 1641, 2037
Bsp1286I	GDGCHC	1 cut(s)	733
Bsp143I	GATC	7 cut(s)	625, 853, 991, 1014, 1022, 1063, 1571
Bsp19I	CCATGG	1 cut(s)	249
BspANI	GGCC	4 cut(s)	257, 1584, 1641, 2037
BspCNI	CTCAG	9 cut(s)	490, 830, 1073, 1612, 1795, 1897, 1932, 2194, 2335
BspFNI	CGCG	4 cut(s)	120, 858, 1054, 2279
BspHI	TCATGA	1 cut(s)	370
BspLI	GGNNCC	9 cut(s)	279, 382, 621, 730, 1016, 1368, 1626, 1681, 1971
BspMAI	CTGCAG	1 cut(s)	1234
BspMI	ACCTGC	1 cut(s)	1523
BspPI	GGATC	6 cut(s)	620, 986, 1009, 1017, 1022, 1058
BspQI	GCTCTTC	1 cut(s)	2039
BspT107I	GGYRCC	2 cut(s)	728, 1624
BspTI	CTTAAG	1 cut(s)	883
BsrDI	GCAATG	2 cut(s)	224, 1345
BsrI	ACTGG	5 cut(s)	201, 518, 590, 844, 1320
BssECI	CCNNGG	8 cut(s)	249, 267, 867, 1725, 1748, 2384, 2385, 2457
BssMI	GATC	7 cut(s)	625, 853, 991, 1014, 1022, 1063, 1571
BssT1I	CCWWGG	4 cut(s)	249, 267, 867, 1748
Bst2UI	CCWGG	2 cut(s)	2386, 2459
Bst4CI	ACNGT	7 cut(s)	769, 920, 1045, 1208, 1516, 2078, 2431
Bst6I	CTCTTC	9 cut(s)	61, 90, 184, 306, 1807, 2039, 2190, 2222, 2433
BstAFI	CTTAAG	1 cut(s)	883
BstC8I	GCNNGC	3 cut(s)	1336, 1878, 2102
BstDSI	CCRYGG	2 cut(s)	249, 1725
BstENI	CCTNNNNNAGG	1 cut(s)	1646
BstF5I	GGATG	7 cut(s)	400, 511, 877, 1276, 1476, 2158, 2449
BstFNI	CGCG	4 cut(s)	120, 858, 1054, 2279
BstH2I	RGCGCY	2 cut(s)	1458, 2480
BstHHI	GCGC	4 cut(s)	122, 860, 1457, 2479
BstKTI	GATC	7 cut(s)	628, 856, 994, 1017, 1025, 1066, 1574
BstMAI	GTCTC	8 cut(s)	37, 1051, 1220, 1646, 1695, 2028, 2187, 2420
BstMBI	GATC	7 cut(s)	625, 853, 991, 1014, 1022, 1063, 1571
BstMCI	CGRYCG	1 cut(s)	2038
BstMWI	GCNNNNNNNGC	4 cut(s)	143, 263, 2046, 2476
BstNI	CCWGG	2 cut(s)	2386, 2459
BstNSI	RCATGY	1 cut(s)	1850
BstSCI	CCNGG	2 cut(s)	2384, 2457
BstSFI	CTRYAG	3 cut(s)	1230, 1506, 2472
BstSLI	GKGCMC	1 cut(s)	733
BstUI	CGCG	4 cut(s)	120, 858, 1054, 2279
BstV1I	GCAGC	7 cut(s)	158, 161, 331, 1244, 1567, 2260, 2377
BstV2I	GAAGAC	2 cut(s)	150, 2213
BstX2I	RGATCY	3 cut(s)	991, 1014, 1063
BstXI	CCANNNNNNTGG	2 cut(s)	274, 525
BstYI	RGATCY	3 cut(s)	991, 1014, 1063
BstZI	CGGCCG	1 cut(s)	2035
Bsu36I	CCTNAGG	2 cut(s)	817, 1983
BsuRI	GGCC	4 cut(s)	257, 1584, 1641, 2037
BtgI	CCRYGG	2 cut(s)	249, 1725
BtsCI	GGATG	7 cut(s)	400, 511, 877, 1276, 1476, 2158, 2449
BtsI	GCAGTG	2 cut(s)	218, 1760
BtsIMutI	CAGTG	3 cut(s)	218, 1327, 1760
BveI	ACCTGC	1 cut(s)	1523
Cac8I	GCNNGC	3 cut(s)	1336, 1878, 2102
CaiI	CAGNNNCTG	2 cut(s)	1514, 2066
CciI	TCATGA	1 cut(s)	370
CfoI	GCGC	4 cut(s)	122, 860, 1457, 2479
Cfr13I	GGNCC	7 cut(s)	381, 578, 1199, 1367, 1535, 2144, 2306
Csp6I	GTAC	3 cut(s)	78, 512, 1758
CspCI	CAANNNNNGTGG	2 cut(s)	388, 423
CviQI	GTAC	3 cut(s)	78, 512, 1758
DpnI	GATC	7 cut(s)	627, 855, 993, 1016, 1024, 1065, 1573
DpnII	GATC	7 cut(s)	625, 853, 991, 1014, 1022, 1063, 1571
DraI	TTTAAA	1 cut(s)	1939
EaeI	YGGCCR	2 cut(s)	1582, 2035
EagI	CGGCCG	1 cut(s)	2035
Eam1104I	CTCTTC	9 cut(s)	61, 90, 184, 306, 1807, 2039, 2190, 2222, 2433
EarI	CTCTTC	9 cut(s)	61, 90, 184, 306, 1807, 2039, 2190, 2222, 2433
EciI	GGCGGA	3 cut(s)	1015, 1021, 1965
EclXI	CGGCCG	1 cut(s)	2035
Eco130I	CCWWGG	4 cut(s)	249, 267, 867, 1748
Eco147I	AGGCCT	2 cut(s)	257, 1641
Eco47I	GGWCC	7 cut(s)	381, 578, 1199, 1367, 1535, 2144, 2306
Eco47III	AGCGCT	1 cut(s)	2478
Eco52I	CGGCCG	1 cut(s)	2035
Eco57I	CTGAAG	9 cut(s)	147, 576, 651, 666, 834, 1139, 1656, 1682, 2088
Eco81I	CCTNAGG	2 cut(s)	817, 1983
EcoNI	CCTNNNNNAGG	1 cut(s)	1646
EcoO109I	RGGNCCY	2 cut(s)	381, 2144
EcoRII	CCWGG	2 cut(s)	2384, 2457
EcoT14I	CCWWGG	4 cut(s)	249, 267, 867, 1748
ErhI	CCWWGG	4 cut(s)	249, 267, 867, 1748
Esp3I	CGTCTC	2 cut(s)	37, 1051
FaqI	GGGAC	5 cut(s)	394, 1380, 1431, 1707, 2395
FauI	CCCGC	2 cut(s)	97, 142
FokI	GGATG	7 cut(s)	407, 518, 884, 1283, 1483, 2145, 2436
FspBI	CTAG	5 cut(s)	608, 1443, 1749, 1898, 2190
GlaI	GCGC	4 cut(s)	121, 859, 1456, 2478
GsuI	CTGGAG	4 cut(s)	46, 570, 1320, 2040
HaeII	RGCGCY	2 cut(s)	1458, 2480
HaeIII	GGCC	4 cut(s)	257, 1584, 1641, 2037
HapII	CCGG	1 cut(s)	2372
HhaI	GCGC	4 cut(s)	122, 860, 1457, 2479
Hin6I	GCGC	4 cut(s)	120, 858, 1455, 2477
HinP1I	GCGC	4 cut(s)	120, 858, 1455, 2477
HincII	GTYRAC	1 cut(s)	1327
HindII	GTYRAC	1 cut(s)	1327
HindIII	AAGCTT	2 cut(s)	679, 1957
HinfI	GANTC	9 cut(s)	245, 611, 806, 1056, 1124, 1316, 1703, 2063, 2089
HpaII	CCGG	1 cut(s)	2372
HphI	GGTGA	4 cut(s)	1213, 1220, 1273, 2126
Hpy166II	GTNNAC	4 cut(s)	204, 1264, 1327, 1760
Hpy8I	GTNNAC	4 cut(s)	204, 1264, 1327, 1760
Hpy99I	CGWCG	1 cut(s)	1040
HpyCH4III	ACNGT	7 cut(s)	769, 920, 1045, 1208, 1516, 2078, 2431
HpyF10VI	GCNNNNNNNGC	4 cut(s)	143, 263, 2046, 2476
HspAI	GCGC	4 cut(s)	120, 858, 1455, 2477
Kzo9I	GATC	7 cut(s)	625, 853, 991, 1014, 1022, 1063, 1571
LguI	GCTCTTC	1 cut(s)	2039
LmnI	GCTCC	9 cut(s)	50, 277, 551, 619, 968, 1685, 1969, 1990, 2404
Lsp1109I	GCAGC	7 cut(s)	158, 161, 331, 1244, 1567, 2260, 2377
LweI	GCATC	7 cut(s)	14, 364, 496, 649, 1486, 1905, 2167
MaeI	CTAG	5 cut(s)	608, 1443, 1749, 1898, 2190
MaeIII	GTNAC	2 cut(s)	2001, 2242
MalI	GATC	7 cut(s)	627, 855, 993, 1016, 1024, 1065, 1573
MboI	GATC	7 cut(s)	625, 853, 991, 1014, 1022, 1063, 1571
MfeI	CAATTG	1 cut(s)	389
MflI	RGATCY	3 cut(s)	991, 1014, 1063
MhlI	GDGCHC	1 cut(s)	733
MlsI	TGGCCA	1 cut(s)	1584
MluNI	TGGCCA	1 cut(s)	1584
MlyI	GAGTC	4 cut(s)	605, 1050, 1697, 2098
MmeI	TCCRAC	1 cut(s)	605
Mox20I	TGGCCA	1 cut(s)	1584
MroXI	GAANNNNTTC	2 cut(s)	920, 2379
MscI	TGGCCA	1 cut(s)	1584
MseI	TTAA	9 cut(s)	462, 474, 884, 1100, 1718, 1785, 1911, 1938, 2433
MslI	CAYNNNNRTG	1 cut(s)	2418
Msp20I	TGGCCA	1 cut(s)	1584
MspCI	CTTAAG	1 cut(s)	883
MspI	CCGG	1 cut(s)	2372
MspR9I	CCNGG	2 cut(s)	2386, 2459
MunI	CAATTG	1 cut(s)	389
Mva1269I	GAATGC	1 cut(s)	884
MvaI	CCWGG	2 cut(s)	2386, 2459
MvnI	CGCG	4 cut(s)	120, 858, 1054, 2279
MwoI	GCNNNNNNNGC	4 cut(s)	143, 263, 2046, 2476
NcoI	CCATGG	1 cut(s)	249
NdeII	GATC	7 cut(s)	625, 853, 991, 1014, 1022, 1063, 1571
NlaIV	GGNNCC	9 cut(s)	279, 382, 621, 730, 1016, 1368, 1626, 1681, 1971
NmeAIII	GCCGAG	1 cut(s)	2013
NspI	RCATGY	1 cut(s)	1850
PagI	TCATGA	1 cut(s)	370
PasI	CCCWGGG	1 cut(s)	2385
PceI	AGGCCT	2 cut(s)	257, 1641
PciSI	GCTCTTC	1 cut(s)	2039
PcsI	WCGNNNNNNNCGW	2 cut(s)	444, 1018
PctI	GAATGC	1 cut(s)	884
PdmI	GAANNNNTTC	2 cut(s)	920, 2379
PfeI	GAWTC	5 cut(s)	245, 806, 1124, 1316, 2063
PflMI	CCANNNNNTGG	2 cut(s)	739, 1772
PleI	GAGTC	4 cut(s)	605, 1050, 1697, 2097
PpsI	GAGTC	4 cut(s)	605, 1050, 1697, 2097
PpuMI	RGGWCCY	2 cut(s)	381, 2144
Psp5II	RGGWCCY	2 cut(s)	381, 2144
Psp6I	CCWGG	2 cut(s)	2384, 2457
PspGI	CCWGG	2 cut(s)	2384, 2457
PspN4I	GGNNCC	9 cut(s)	279, 382, 621, 730, 1016, 1368, 1626, 1681, 1971
PspPI	GGNCC	7 cut(s)	381, 578, 1199, 1367, 1535, 2144, 2306
PspPPI	RGGWCCY	2 cut(s)	381, 2144
PstI	CTGCAG	1 cut(s)	1234
PstNI	CAGNNNCTG	2 cut(s)	1514, 2066
PsuI	RGATCY	3 cut(s)	991, 1014, 1063
RsaI	GTAC	3 cut(s)	79, 513, 1759
RsaNI	GTAC	3 cut(s)	78, 512, 1758
RseI	CAYNNNNRTG	1 cut(s)	2418
SapI	GCTCTTC	1 cut(s)	2039
SaqAI	TTAA	9 cut(s)	462, 474, 884, 1100, 1718, 1785, 1911, 1938, 2433
Sau3AI	GATC	7 cut(s)	625, 853, 991, 1014, 1022, 1063, 1571
Sau96I	GGNCC	7 cut(s)	381, 578, 1199, 1367, 1535, 2144, 2306
SchI	GAGTC	4 cut(s)	605, 1050, 1697, 2098
ScrFI	CCNGG	2 cut(s)	2386, 2459
SduI	GDGCHC	1 cut(s)	733
SfaNI	GCATC	7 cut(s)	14, 364, 496, 649, 1486, 1905, 2167
SfcI	CTRYAG	3 cut(s)	1230, 1506, 2472
SinI	GGWCC	7 cut(s)	381, 578, 1199, 1367, 1535, 2144, 2306
SmiMI	CAYNNNNRTG	1 cut(s)	2418
SmlI	CTYRAG	4 cut(s)	705, 800, 883, 1832
SmoI	CTYRAG	4 cut(s)	705, 800, 883, 1832
SseBI	AGGCCT	2 cut(s)	257, 1641
SspMI	CTAG	5 cut(s)	608, 1443, 1749, 1898, 2190
StuI	AGGCCT	2 cut(s)	257, 1641
StyD4I	CCNGG	2 cut(s)	2384, 2457
StyI	CCWWGG	4 cut(s)	249, 267, 867, 1748
TaaI	ACNGT	7 cut(s)	769, 920, 1045, 1208, 1516, 2078, 2431
TaqI	TCGA	3 cut(s)	438, 685, 1631
TaqII	GACCGA	1 cut(s)	1384
TatI	WGTACW	2 cut(s)	77, 511
TauI	GCSGC	4 cut(s)	1054, 1145, 2040, 2279
TfiI	GAWTC	5 cut(s)	245, 806, 1124, 1316, 2063
Tru1I	TTAA	9 cut(s)	462, 474, 884, 1100, 1718, 1785, 1911, 1938, 2433
Tru9I	TTAA	9 cut(s)	462, 474, 884, 1100, 1718, 1785, 1911, 1938, 2433
TscAI	CASTG	3 cut(s)	225, 1327, 1767
TseI	GCWGC	7 cut(s)	146, 149, 344, 1232, 1555, 2273, 2390
TspGWI	ACGGA	1 cut(s)	1742
TspRI	CASTG	3 cut(s)	225, 1327, 1767
Van91I	CCANNNNNTGG	2 cut(s)	739, 1772
Vha464I	CTTAAG	1 cut(s)	883
VpaK11BI	GGWCC	7 cut(s)	381, 578, 1199, 1367, 1535, 2144, 2306
XagI	CCTNNNNNAGG	1 cut(s)	1646
XapI	RAATTY	1 cut(s)	1540
XbaI	TCTAGA	1 cut(s)	1897
XceI	RCATGY	1 cut(s)	1850
XmaJI	CCTAGG	1 cut(s)	1748
XmnI	GAANNNNTTC	2 cut(s)	920, 2379
XspI	CTAG	5 cut(s)	608, 1443, 1749, 1898, 2190

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.