Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000424.1

Orthogroup ID

OG0002497

Physical Location & Seq

Genomic Coordinates Reverse (-)

84955 .. 87847

Gene Structure 2893 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000424.1_g000020.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2649 bp

atgtacaacggaatagggttacagactccaagagggtccggaaccaatggctatatccagacgaacaagttcttcatcaaatccaagaccggcaaggtcgccgagaactccagaggcttcgagggcgaccagggcatggccggcgtctccaagaagcccaacagagacatccttgagcatgatcgcaagcgccagattgagctcaagcttgtcgtcctcgaggacaagctcaccgatcagggtttcaccgacgctgagattgctgacaagctcgcccaggccagggcgactctcgaagccgccgccgcctccgaggacatgggtggacccactgcctttgttcttcttggagataacaaggtttcagatacacagacccaccaaattgctgctaggaagcagaagcagatggacaacttaagagatgctttgaaactaaaacctgaagctacagaaacaaatactgaggagatcgaggatggactaatcattagtccgaagaatgatggtagcaggcattatgagaggaaagagcattcgtttttggacagagaatctgggtggaagaaatctgtggaggataagcacaaggttgagaaagataagaaaaagagcgttaaagaatctaggaggaacaaaaagaaagaaagtaggaagagaaggcataaggatgattcttctgatacagatagcagtggtagccctctgaaacctgataaaaagaaaaagcgtccgagtacaagtagcagcagtgaagaagatgattctgaagttgatacatcgaaaaaggaagttgagaaatacaaaaaacggcagaagaggtacgattcagaagatgattctgaagttgatgttgacaagaagcggaaggttgtaaagaagcatggtaaaagccgaaacaataacactgatgattctgataccagtgatgatgcggaggccagatccaggaaggaaattaagaaatccaaacaacctcataggaggcatgattcagatgaagatgattctgaagatgatgttgacaagaagaggaaggttgtaatgaagcatagtaagactagaaacgatgatactgatgattctgcttccagtgaagatgccgaggatagatccacaaaggaaggcaagaaatccaaacaaccccgtaggaggcatgattcagatgaagatgattctgaagatgatgttgacaagaagaggaaggttgtaatgaagcatagtaagactagaaacgatgatactgatgattctgcttccagtgaagatgccgaggatagatccacaaaggaaggcaagaaatccaaacaaccccgtaggaggcatgcttcagatgaagatgattctgaagatgatgttgacaagaagaggaaggttgtaatgaagcatagtaagactagaaacgatgatactgatgattctgcttccagtgaagatgccgaggatagatccacaaaggaaggcaagaaatccaaacaaccccgtaggaggcatgcttcagatgaagatgattctgaagatgatgttgacaagaagaggaaggttgtaatgaagcatagtaagactagaaacgatgatactgatgattctgcttccagtgaagatgccgaggatagatccacaaaggaaggcaagaaatccaaacaaccccgtaggaggcatgcttcagatgaagatgattctgaagatgatgttgacaagaagaggaaggttgtaaagaagcatagtaaaagcagaaacgatgataatgatgattctgctgccagtgaagatgtcgaggatagatccacaaaggaagtcaagaaattccaacaacctcgtaggaggcatgattcagatgatgattctggttatcctgaagaactgccaaagagcagaactgaaaagggcaaacaacatgtgaaaccaaacaaaaggcatgactctggggatgagtctgattttgacagcagaatggaaaggaaaagtagccaagttgagcagcaaaggaatcagcaggtcagccgcagggtagatcgagatgattttgatgtcgagcaagccgacaatggaaaaagcagaaaattgtatgatagtgattctgactatgaaagatccagaaaaagtagaggtgcaatgacagaaaagagtagaagaagtggcaggaatgatactaatgatgatgatactaatattgggaggaaacccggaagggttgaagagggtgatggaggacgtggaaggcacaacaagggtgaaatgcaaagaggaaggaagaatgaaagagatgaagaggatcatgattatagaaggcccagggaaggtctattacaggagcatggaaatagaaagcgtggtactagagaggaagaaggggcaaatgaggatattgagagggatagacatatggattacaagagagcaaaatacgatgagtctagatcaagtgagaggagaaggcatgaaactgacagacataatgaagaggagcataagtctagaaggcatggagaagatgaaggggagcgtagaaacagaagacatggaaaactggaggaacaacagggaaataaggagattgagagagatagacaggattccagatcaagtgagagaagaaggtacgagaatgtcaagcacaatgacggtcggtccaggcatcgtgactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

cwf21

Protein Analysis

882

Amino Acids

102.43

Weight (kDa)

7.76

Isoelectric Point (pI)

71.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002497)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49601
fragaria_vesca	FvH4_2g30620 FvH4_2g30620 FvH4_2g30620 FvH4_2g30620 FvH4_2g30620
malus_domestica	MD08G1133100.v1.1 MD15G1110900.v1.1 MD15G1111000.v1.1 MD15G1111100.v1.1
prunus_persica	Prupe.1G463200_v2.0.a1 Prupe.1G463200_v2.0.a1 Prupe.1G463200_v2.0.a1 Prupe.1G463200_v2.0.a1 Prupe.1G463200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0410401 RchiOBHm_Chr6g0312381
rosa_laevigata	RLG00000029779 RLG00000029782 RLG00000029786 RLG00000029787 RLG00000029792 RLG00000029797 RLG00000029803
rosa_multiflora	Rmu_co8494335.1_g000001 Rmu_ssc0000424.1_g000020 Rmu_ssc0000424.1_g000021
rosa_roxburghii	Rroxscaffold_5G00355210 Rroxscaffold_7G00156850
rosa_rugosa	Rorug01G0090000 Rorug04G0102300 Rorug06G0395200 Rorug06G0395300 Rorug06G0395400
rosa_samantha	Rh1AG107900 Rh4BG159600 Rh6AG512600 Rh6BG523500 Rh6CG528900 Rh6DG514800
rosa_wichuraiana	Rw6G044550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	218
Acc36I	ACCTGC	1 cut(s)	1987
AccB7I	CCANNNNNTGG	1 cut(s)	136
AccIII	TCCGGA	1 cut(s)	38
AciI	CCGC	6 cut(s)	300, 303, 306, 865, 935, 2005
AclWI	GGATC	8 cut(s)	939, 1107, 1275, 1443, 1611, 1779, 2088, 2283
AcoI	YGGCCR	1 cut(s)	138
AcsI	RAATTY	1 cut(s)	1805
AcyI	GRCGYC	1 cut(s)	144
AfaI	GTAC	5 cut(s)	5, 739, 824, 2338, 2603
AfiI	CCNNNNNNNGG	9 cut(s)	136, 282, 283, 948, 1152, 1320, 1488, 1656, 2300
AflII	CTTAAG	1 cut(s)	418
AflIII	ACRYGT	1 cut(s)	1897
AgsI	TTSAA	2 cut(s)	433, 2198
AhdI	GACNNNNNGTC	1 cut(s)	2629
AjiI	CACGTC	1 cut(s)	2216
AjnI	CCWGG	6 cut(s)	129, 276, 281, 947, 2294, 2633
AluBI	AGCT	5 cut(s)	202, 208, 229, 271, 449
AluI	AGCT	5 cut(s)	202, 208, 229, 271, 449
Alw21I	GWGCWC	1 cut(s)	204
Alw26I	GTCTC	2 cut(s)	151, 159
AlwI	GGATC	8 cut(s)	939, 1107, 1275, 1443, 1611, 1779, 2088, 2283
Ama87I	CYCGRG	1 cut(s)	218
Aor13HI	TCCGGA	1 cut(s)	38
AoxI	GGCC	4 cut(s)	138, 279, 939, 2291
ApeKI	GCWGC	4 cut(s)	389, 747, 1760, 1981
ApoI	RAATTY	1 cut(s)	1805
Asp700I	GAANNNNTTC	1 cut(s)	68
AspLEI	GCGC	1 cut(s)	192
AspS9I	GGNCC	4 cut(s)	36, 326, 2292, 2631
AsuC2I	CCSGG	1 cut(s)	2187
AsuHPI	GGTGA	4 cut(s)	223, 238, 2216, 2246
AvaI	CYCGRG	1 cut(s)	218
AvaII	GGWCC	3 cut(s)	36, 326, 2631
BanII	GRGCYC	1 cut(s)	204
BarI	GAAGNNNNNNTAC	2 cut(s)	2292, 2324
BbsI	GAAGAC	1 cut(s)	2524
Bbv12I	GWGCWC	1 cut(s)	204
BbvI	GCAGC	4 cut(s)	376, 759, 1747, 1993
BccI	CCATC	4 cut(s)	403, 473, 500, 2201
BceAI	ACGGC	1 cut(s)	827
BciT130I	CCWGG	6 cut(s)	131, 278, 283, 949, 2296, 2635
BcnI	CCSGG	1 cut(s)	2187
BcoDI	GTCTC	2 cut(s)	151, 159
BfaI	CTAG	9 cut(s)	393, 627, 1062, 1230, 1398, 1566, 2340, 2418, 2478
BfmI	CTRYAG	1 cut(s)	450
BfoI	RGCGCY	1 cut(s)	193
BfrI	CTTAAG	1 cut(s)	418
BfuAI	ACCTGC	1 cut(s)	1987
BisI	GCNGC	8 cut(s)	300, 303, 306, 390, 748, 1761, 1982, 2005
BlsI	GCNGC	8 cut(s)	301, 304, 307, 391, 749, 1762, 1983, 2006
Bme1390I	CCNGG	7 cut(s)	131, 278, 283, 949, 2187, 2296, 2635
Bme18I	GGWCC	3 cut(s)	36, 326, 2631
BmeRI	GACNNNNNGTC	1 cut(s)	2629
BmeT110I	CYCGRG	1 cut(s)	218
BmgBI	CACGTC	1 cut(s)	2216
BmgT120I	GGNCC	4 cut(s)	36, 326, 2292, 2631
BmiI	GGNNCC	3 cut(s)	37, 43, 328
BmrFI	CCNGG	7 cut(s)	131, 278, 283, 949, 2187, 2296, 2635
BmsI	GCATC	6 cut(s)	415, 922, 1090, 1258, 1426, 1594
BpiI	GAAGAC	1 cut(s)	2524
BpmI	CTGGAG	2 cut(s)	94, 2552
BpuEI	CTTGAG	2 cut(s)	188, 194
BpuMI	CCSGG	1 cut(s)	2187
BsaHI	GRCGYC	1 cut(s)	144
BsaWI	WCCGGW	1 cut(s)	38
BsaXI	ACNNNNNCTCC	2 cut(s)	2459, 2489
Bsc4I	CCNNNNNNNGG	9 cut(s)	136, 282, 283, 948, 1152, 1320, 1488, 1656, 2300
Bse118I	RCCGGY	2 cut(s)	89, 140
Bse1I	ACTGG	7 cut(s)	924, 1092, 1260, 1428, 1596, 1764, 2535
Bse3DI	GCAATG	1 cut(s)	2121
BseAI	TCCGGA	1 cut(s)	38
BseBI	CCWGG	6 cut(s)	131, 278, 283, 949, 2296, 2635
BseGI	GGATG	4 cut(s)	168, 484, 676, 1936
BseLI	CCNNNNNNNGG	9 cut(s)	136, 282, 283, 948, 1152, 1320, 1488, 1656, 2300
BseMI	GCAATG	1 cut(s)	2121
BseMII	CTCAG	2 cut(s)	246, 456
BseNI	ACTGG	7 cut(s)	924, 1092, 1260, 1428, 1596, 1764, 2535
BseRI	GAGGAG	3 cut(s)	482, 2446, 2480
BseXI	GCAGC	4 cut(s)	376, 759, 1747, 1993
Bsh1285I	CGRYCG	1 cut(s)	2629
BshFI	GGCC	4 cut(s)	140, 281, 941, 2293
BsiEI	CGRYCG	1 cut(s)	2629
BsiHKAI	GWGCWC	1 cut(s)	204
BsiHKCI	CYCGRG	1 cut(s)	218
BsiSI	CCGG	4 cut(s)	39, 90, 141, 2187
BslI	CCNNNNNNNGG	9 cut(s)	136, 282, 283, 948, 1152, 1320, 1488, 1656, 2300
BsmAI	GTCTC	2 cut(s)	151, 159
BsmBI	CGTCTC	1 cut(s)	151
BsmI	GAATGC	1 cut(s)	535
BsnI	GGCC	4 cut(s)	140, 281, 941, 2293
BsoBI	CYCGRG	1 cut(s)	218
Bsp1286I	GDGCHC	1 cut(s)	204
Bsp13I	TCCGGA	1 cut(s)	38
Bsp1407I	TGTACA	1 cut(s)	3
BspACI	CCGC	6 cut(s)	300, 303, 306, 865, 935, 2005
BspANI	GGCC	4 cut(s)	140, 281, 941, 2293
BspCNI	CTCAG	2 cut(s)	247, 457
BspEI	TCCGGA	1 cut(s)	38
BspHI	TCATGA	1 cut(s)	2278
BspLI	GGNNCC	3 cut(s)	37, 43, 328
BspMI	ACCTGC	1 cut(s)	1987
BspPI	GGATC	8 cut(s)	939, 1107, 1275, 1443, 1611, 1779, 2088, 2283
BspTI	CTTAAG	1 cut(s)	418
BsrDI	GCAATG	1 cut(s)	2121
BsrFI	RCCGGY	2 cut(s)	89, 140
BsrGI	TGTACA	1 cut(s)	3
BsrI	ACTGG	7 cut(s)	924, 1092, 1260, 1428, 1596, 1764, 2535
BssAI	RCCGGY	2 cut(s)	89, 140
BssNI	GRCGYC	1 cut(s)	144
Bst2UI	CCWGG	6 cut(s)	131, 278, 283, 949, 2296, 2635
Bst4CI	ACNGT	1 cut(s)	2627
BstACI	GRCGYC	1 cut(s)	144
BstAFI	CTTAAG	1 cut(s)	418
BstAUI	TGTACA	1 cut(s)	3
BstC8I	GCNNGC	8 cut(s)	142, 188, 273, 515, 1326, 1494, 1662, 2040
BstDEI	CTNAG	2 cut(s)	255, 465
BstF5I	GGATG	4 cut(s)	168, 484, 676, 1936
BstH2I	RGCGCY	1 cut(s)	193
BstHHI	GCGC	1 cut(s)	192
BstMAI	GTCTC	2 cut(s)	151, 159
BstMCI	CGRYCG	1 cut(s)	2629
BstMWI	GCNNNNNNNGC	6 cut(s)	123, 132, 141, 260, 305, 699
BstNI	CCWGG	6 cut(s)	131, 278, 283, 949, 2296, 2635
BstNSI	RCATGY	4 cut(s)	1328, 1496, 1664, 1901
BstSCI	CCNGG	7 cut(s)	129, 276, 281, 947, 2185, 2294, 2633
BstSFI	CTRYAG	1 cut(s)	450
BstV1I	GCAGC	4 cut(s)	376, 759, 1747, 1993
BstV2I	GAAGAC	1 cut(s)	2524
BstX2I	RGATCY	7 cut(s)	944, 1112, 1280, 1448, 1616, 1784, 2093
BstYI	RGATCY	7 cut(s)	944, 1112, 1280, 1448, 1616, 1784, 2093
BsuRI	GGCC	4 cut(s)	140, 281, 941, 2293
BtrI	CACGTC	1 cut(s)	2216
BtsCI	GGATG	4 cut(s)	168, 484, 676, 1936
BtsI	GCAGTG	3 cut(s)	330, 700, 757
BveI	ACCTGC	1 cut(s)	1987
Cac8I	GCNNGC	8 cut(s)	142, 188, 273, 515, 1326, 1494, 1662, 2040
CciI	TCATGA	1 cut(s)	2278
CfoI	GCGC	1 cut(s)	192
Cfr10I	RCCGGY	2 cut(s)	89, 140
Cfr13I	GGNCC	4 cut(s)	36, 326, 2292, 2631
CseI	GACGC	3 cut(s)	133, 260, 719
Csp6I	GTAC	5 cut(s)	4, 738, 823, 2337, 2602
CspCI	CAANNNNNGTGG	2 cut(s)	319, 354
CviQI	GTAC	5 cut(s)	4, 738, 823, 2337, 2602
DdeI	CTNAG	2 cut(s)	255, 465
DriI	GACNNNNNGTC	1 cut(s)	2629
EaeI	YGGCCR	1 cut(s)	138
Eam1105I	GACNNNNNGTC	1 cut(s)	2629
Ecl136II	GAGCTC	1 cut(s)	202
Eco24I	GRGCYC	1 cut(s)	204
Eco47I	GGWCC	3 cut(s)	36, 326, 2631
Eco53kI	GAGCTC	1 cut(s)	202
Eco88I	CYCGRG	1 cut(s)	218
EcoICRI	GAGCTC	1 cut(s)	202
EcoRII	CCWGG	6 cut(s)	129, 276, 281, 947, 2294, 2633
EcoT38I	GRGCYC	1 cut(s)	204
Esp3I	CGTCTC	1 cut(s)	151
FalI	AAGNNNNNCTT	2 cut(s)	412, 444
FauNDI	CATATG	1 cut(s)	2385
Fnu4HI	GCNGC	8 cut(s)	300, 303, 306, 390, 748, 1761, 1982, 2005
FokI	GGATG	4 cut(s)	155, 491, 683, 1943
FriOI	GRGCYC	1 cut(s)	204
Fsp4HI	GCNGC	8 cut(s)	300, 303, 306, 390, 748, 1761, 1982, 2005
FspBI	CTAG	9 cut(s)	393, 627, 1062, 1230, 1398, 1566, 2340, 2418, 2478
GlaI	GCGC	1 cut(s)	191
GluI	GCNGC	8 cut(s)	300, 303, 306, 390, 748, 1761, 1982, 2005
GsuI	CTGGAG	2 cut(s)	94, 2552
HaeII	RGCGCY	1 cut(s)	193
HaeIII	GGCC	4 cut(s)	140, 281, 941, 2293
HapII	CCGG	4 cut(s)	39, 90, 141, 2187
HgaI	GACGC	3 cut(s)	133, 260, 719
HhaI	GCGC	1 cut(s)	192
Hin1I	GRCGYC	1 cut(s)	144
Hin6I	GCGC	1 cut(s)	190
HinP1I	GCGC	1 cut(s)	190
HincII	GTYRAC	6 cut(s)	856, 1024, 1192, 1360, 1528, 1696
HindII	GTYRAC	6 cut(s)	856, 1024, 1192, 1360, 1528, 1696
HindIII	AAGCTT	1 cut(s)	206
HpaII	CCGG	4 cut(s)	39, 90, 141, 2187
HphI	GGTGA	4 cut(s)	223, 238, 2216, 2246
Hpy166II	GTNNAC	7 cut(s)	326, 856, 1024, 1192, 1360, 1528, 1696
Hpy8I	GTNNAC	7 cut(s)	326, 856, 1024, 1192, 1360, 1528, 1696
Hpy99I	CGWCG	1 cut(s)	254
HpyCH4III	ACNGT	1 cut(s)	2627
HpyCH4IV	ACGT	1 cut(s)	2215
HpyCH4V	TGCA	2 cut(s)	2114, 2242
HpyF10VI	GCNNNNNNNGC	6 cut(s)	123, 132, 141, 260, 305, 699
HpyF3I	CTNAG	2 cut(s)	255, 465
HpySE526I	ACGT	1 cut(s)	2215
Hsp92I	GRCGYC	1 cut(s)	144
HspAI	GCGC	1 cut(s)	190
Kpn2I	TCCGGA	1 cut(s)	38
KroI	GCCGGC	1 cut(s)	140
KroNI	GCCGGC	1 cut(s)	142
LmnI	GCTCC	3 cut(s)	2314, 2467, 2503
Lsp1109I	GCAGC	4 cut(s)	376, 759, 1747, 1993
LweI	GCATC	6 cut(s)	415, 922, 1090, 1258, 1426, 1594
MaeI	CTAG	9 cut(s)	393, 627, 1062, 1230, 1398, 1566, 2340, 2418, 2478
MaeII	ACGT	1 cut(s)	2215
MaeIII	GTNAC	2 cut(s)	18, 2642
MflI	RGATCY	7 cut(s)	944, 1112, 1280, 1448, 1616, 1784, 2093
MhlI	GDGCHC	1 cut(s)	204
MluCI	AATT	4 cut(s)	384, 957, 1805, 2063
MlyI	GAGTC	5 cut(s)	19, 283, 1916, 1943, 2423
MmeI	TCCRAC	1 cut(s)	1834
MroI	TCCGGA	1 cut(s)	38
MroNI	GCCGGC	1 cut(s)	140
MroXI	GAANNNNTTC	1 cut(s)	68
MseI	TTAA	3 cut(s)	419, 618, 960
MslI	CAYNNNNRTG	1 cut(s)	669
MspCI	CTTAAG	1 cut(s)	418
MspI	CCGG	4 cut(s)	39, 90, 141, 2187
MspR9I	CCNGG	7 cut(s)	131, 278, 283, 949, 2187, 2296, 2635
Mva1269I	GAATGC	1 cut(s)	535
MvaI	CCWGG	6 cut(s)	131, 278, 283, 949, 2296, 2635
MwoI	GCNNNNNNNGC	6 cut(s)	123, 132, 141, 260, 305, 699
NaeI	GCCGGC	1 cut(s)	142
NciI	CCSGG	1 cut(s)	2187
NdeI	CATATG	1 cut(s)	2385
NgoMIV	GCCGGC	1 cut(s)	140
NlaIV	GGNNCC	3 cut(s)	37, 43, 328
NmeAIII	GCCGAG	5 cut(s)	127, 1129, 1297, 1465, 1633
NmuCI	GTSAC	1 cut(s)	2642
NspI	RCATGY	4 cut(s)	1328, 1496, 1664, 1901
PaeI	GCATGC	3 cut(s)	1328, 1496, 1664
PaeR7I	CTCGAG	1 cut(s)	218
PagI	TCATGA	1 cut(s)	2278
PasI	CCCWGGG	1 cut(s)	2295
PciI	ACATGT	1 cut(s)	1897
PcsI	WCGNNNNNNNCGW	1 cut(s)	2040
PctI	GAATGC	1 cut(s)	535
PdiI	GCCGGC	1 cut(s)	142
PdmI	GAANNNNTTC	1 cut(s)	68
PflMI	CCANNNNNTGG	1 cut(s)	136
PfoI	TCCNGGA	1 cut(s)	947
PkrI	GCNGC	8 cut(s)	301, 304, 307, 391, 749, 1762, 1983, 2006
PleI	GAGTC	5 cut(s)	19, 283, 1916, 1942, 2422
PpsI	GAGTC	5 cut(s)	19, 283, 1916, 1942, 2422
PscI	ACATGT	1 cut(s)	1897
Psp124BI	GAGCTC	1 cut(s)	204
Psp6I	CCWGG	6 cut(s)	129, 276, 281, 947, 2294, 2633
PspGI	CCWGG	6 cut(s)	129, 276, 281, 947, 2294, 2633
PspN4I	GGNNCC	3 cut(s)	37, 43, 328
PspPI	GGNCC	4 cut(s)	36, 326, 2292, 2631
PspXI	VCTCGAGB	1 cut(s)	218
PsuI	RGATCY	7 cut(s)	944, 1112, 1280, 1448, 1616, 1784, 2093
RsaI	GTAC	5 cut(s)	5, 739, 824, 2338, 2603
RsaNI	GTAC	5 cut(s)	4, 738, 823, 2337, 2602
RseI	CAYNNNNRTG	1 cut(s)	669
SacI	GAGCTC	1 cut(s)	204
SaqAI	TTAA	3 cut(s)	419, 618, 960
SatI	GCNGC	8 cut(s)	300, 303, 306, 390, 748, 1761, 1982, 2005
Sau96I	GGNCC	4 cut(s)	36, 326, 2292, 2631
SchI	GAGTC	5 cut(s)	19, 283, 1916, 1943, 2423
ScrFI	CCNGG	7 cut(s)	131, 278, 283, 949, 2187, 2296, 2635
SduI	GDGCHC	1 cut(s)	204
SfaNI	GCATC	6 cut(s)	415, 922, 1090, 1258, 1426, 1594
SfcI	CTRYAG	1 cut(s)	450
Sfr274I	CTCGAG	1 cut(s)	218
SinI	GGWCC	3 cut(s)	36, 326, 2631
SlaI	CTCGAG	1 cut(s)	218
SmiMI	CAYNNNNRTG	1 cut(s)	669
SmlI	CTYRAG	4 cut(s)	173, 203, 218, 418
SmoI	CTYRAG	4 cut(s)	173, 203, 218, 418
SphI	GCATGC	3 cut(s)	1328, 1496, 1664
Sse9I	AATT	4 cut(s)	384, 957, 1805, 2063
SsiI	CCGC	6 cut(s)	300, 303, 306, 865, 935, 2005
SspI	AATATT	1 cut(s)	2173
SspMI	CTAG	9 cut(s)	393, 627, 1062, 1230, 1398, 1566, 2340, 2418, 2478
SstI	GAGCTC	1 cut(s)	204
StyD4I	CCNGG	7 cut(s)	129, 276, 281, 947, 2185, 2294, 2633
TaaI	ACNGT	1 cut(s)	2627
TaiI	ACGT	1 cut(s)	2218
TaqI	TCGA	8 cut(s)	120, 219, 294, 474, 782, 1776, 2017, 2034
TaqII	GACCGA	1 cut(s)	2619
TasI	AATT	4 cut(s)	384, 957, 1805, 2063
TatI	WGTACW	2 cut(s)	3, 737
TauI	GCSGC	4 cut(s)	302, 305, 308, 2007
Tru1I	TTAA	3 cut(s)	419, 618, 960
Tru9I	TTAA	3 cut(s)	419, 618, 960
TseFI	GTSAC	1 cut(s)	2642
TseI	GCWGC	4 cut(s)	389, 747, 1760, 1981
Tsp45I	GTSAC	1 cut(s)	2642
TspGWI	ACGGA	1 cut(s)	24
Van91I	CCANNNNNTGG	1 cut(s)	136
Vha464I	CTTAAG	1 cut(s)	418
VpaK11BI	GGWCC	3 cut(s)	36, 326, 2631
XapI	RAATTY	1 cut(s)	1805
XbaI	TCTAGA	2 cut(s)	2417, 2477
XceI	RCATGY	4 cut(s)	1328, 1496, 1664, 1901
XhoI	CTCGAG	1 cut(s)	218
XmnI	GAANNNNTTC	1 cut(s)	68
XspI	CTAG	9 cut(s)	393, 627, 1062, 1230, 1398, 1566, 2340, 2418, 2478

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.