calcium-binding protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G41410 |
| fragaria_vesca | FvH4_6g25060 |
| malus_domestica | MD12G1087300.v1.1 MD14G1069200.v1.1 MD14G1083200.v1.1 |
| prunus_persica | Prupe.7G047300_v2.0.a1 |
| pyrus_communis | pycom07g14940 pycom12g07550 pycom14g07230 |
| rosa_chinensis | RchiOBHm_Chr2g0124821 |
| rosa_laevigata | RLG00000018825 |
| rosa_multiflora | Rmu_sc0000507.1_g000002 Rmu_sc0002939.1_g000021 |
| rosa_roxburghii | Rroxscaffold_1G00049520 Rroxscaffold_2G00119640 |
| rosa_rugosa | Rorug02G0252900 |
| rosa_samantha | Rh2AG312400 Rh2BG320600 Rh2CG300600 Rh2DG337900 Rh4BG103800 Rh5BG198000 Rh5BG310900 Rh5DG321400 |
| rosa_wichuraiana | Rw2G025230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 3 cut(s) | 39, 54, 69 |
| AccIII | TCCGGA | 1 cut(s) | 92 |
| AciI | CCGC | 4 cut(s) | 37, 52, 57, 67 |
| AclWI | GGATC | 2 cut(s) | 113, 126 |
| AcyI | GRCGYC | 1 cut(s) | 147 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 86 |
| AgsI | TTSAA | 1 cut(s) | 235 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 79 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 17, 49 |
| AluBI | AGCT | 2 cut(s) | 167, 197 |
| AluI | AGCT | 2 cut(s) | 167, 197 |
| AlwI | GGATC | 2 cut(s) | 113, 126 |
| Aor13HI | TCCGGA | 1 cut(s) | 92 |
| ApeKI | GCWGC | 2 cut(s) | 167, 197 |
| AspS9I | GGNCC | 1 cut(s) | 49 |
| AsuC2I | CCSGG | 1 cut(s) | 144 |
| AvaII | GGWCC | 1 cut(s) | 49 |
| BamHI | GGATCC | 1 cut(s) | 118 |
| BbsI | GAAGAC | 2 cut(s) | 99, 145 |
| BbvCI | CCTCAGC | 1 cut(s) | 17 |
| BbvI | GCAGC | 2 cut(s) | 154, 184 |
| BccI | CCATC | 1 cut(s) | 185 |
| BceAI | ACGGC | 2 cut(s) | 44, 112 |
| BcnI | CCSGG | 1 cut(s) | 144 |
| BfmI | CTRYAG | 1 cut(s) | 198 |
| BglII | AGATCT | 1 cut(s) | 214 |
| BisI | GCNGC | 2 cut(s) | 168, 198 |
| BlsI | GCNGC | 2 cut(s) | 169, 199 |
| Bme1390I | CCNGG | 1 cut(s) | 144 |
| Bme18I | GGWCC | 1 cut(s) | 49 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 79 |
| BmgT120I | GGNCC | 1 cut(s) | 49 |
| BmiI | GGNNCC | 2 cut(s) | 91, 120 |
| BmrFI | CCNGG | 1 cut(s) | 144 |
| BpiI | GAAGAC | 2 cut(s) | 99, 145 |
| Bpu10I | CCTNAGC | 1 cut(s) | 17 |
| BpuMI | CCSGG | 1 cut(s) | 144 |
| BsaHI | GRCGYC | 1 cut(s) | 147 |
| BsaJI | CCNNGG | 2 cut(s) | 114, 160 |
| BsaWI | WCCGGW | 1 cut(s) | 92 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 86 |
| BseAI | TCCGGA | 1 cut(s) | 92 |
| BseDI | CCNNGG | 2 cut(s) | 114, 160 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 86 |
| BseMII | CTCAG | 1 cut(s) | 31 |
| BseRI | GAGGAG | 2 cut(s) | 103, 149 |
| BseXI | GCAGC | 2 cut(s) | 154, 184 |
| BsiSI | CCGG | 2 cut(s) | 93, 144 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 86 |
| Bsp13I | TCCGGA | 1 cut(s) | 92 |
| Bsp143I | GATC | 3 cut(s) | 118, 207, 214 |
| BspACI | CCGC | 4 cut(s) | 37, 52, 57, 67 |
| BspCNI | CTCAG | 1 cut(s) | 30 |
| BspEI | TCCGGA | 1 cut(s) | 92 |
| BspLI | GGNNCC | 2 cut(s) | 91, 120 |
| BspMAI | CTGCAG | 1 cut(s) | 202 |
| BspPI | GGATC | 2 cut(s) | 113, 126 |
| BsrBI | CCGCTC | 3 cut(s) | 39, 54, 69 |
| BssECI | CCNNGG | 2 cut(s) | 114, 160 |
| BssMI | GATC | 3 cut(s) | 118, 207, 214 |
| BssNI | GRCGYC | 1 cut(s) | 147 |
| Bst4CI | ACNGT | 1 cut(s) | 81 |
| Bst6I | CTCTTC | 1 cut(s) | 38 |
| BstACI | GRCGYC | 1 cut(s) | 147 |
| BstDEI | CTNAG | 3 cut(s) | 17, 42, 211 |
| BstKTI | GATC | 3 cut(s) | 121, 210, 217 |
| BstMBI | GATC | 3 cut(s) | 118, 207, 214 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 27, 36 |
| BstSCI | CCNGG | 1 cut(s) | 142 |
| BstSFI | CTRYAG | 1 cut(s) | 198 |
| BstV1I | GCAGC | 2 cut(s) | 154, 184 |
| BstV2I | GAAGAC | 2 cut(s) | 99, 145 |
| BstX2I | RGATCY | 2 cut(s) | 118, 214 |
| BstYI | RGATCY | 2 cut(s) | 118, 214 |
| Cfr13I | GGNCC | 1 cut(s) | 49 |
| CseI | GACGC | 2 cut(s) | 90, 136 |
| CviJI | RGCY | 6 cut(s) | 15, 21, 90, 142, 167, 197 |
| CviKI_1 | RGCY | 6 cut(s) | 15, 21, 90, 142, 167, 197 |
| DdeI | CTNAG | 3 cut(s) | 17, 42, 211 |
| DpnI | GATC | 3 cut(s) | 120, 209, 216 |
| DpnII | GATC | 3 cut(s) | 118, 207, 214 |
| DriI | GACNNNNNGTC | 1 cut(s) | 79 |
| Eam1104I | CTCTTC | 1 cut(s) | 38 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 79 |
| EarI | CTCTTC | 1 cut(s) | 38 |
| EciI | GGCGGA | 1 cut(s) | 46 |
| Eco47I | GGWCC | 1 cut(s) | 49 |
| FaiI | YATR | 2 cut(s) | 189, 224 |
| FauI | CCCGC | 1 cut(s) | 74 |
| Fnu4HI | GCNGC | 2 cut(s) | 168, 198 |
| Fsp4HI | GCNGC | 2 cut(s) | 168, 198 |
| GluI | GCNGC | 2 cut(s) | 168, 198 |
| HapII | CCGG | 2 cut(s) | 93, 144 |
| HgaI | GACGC | 2 cut(s) | 90, 136 |
| Hin1I | GRCGYC | 1 cut(s) | 147 |
| HpaII | CCGG | 2 cut(s) | 93, 144 |
| Hpy188I | TCNGA | 3 cut(s) | 73, 118, 164 |
| Hpy188III | TCNNGA | 1 cut(s) | 93 |
| Hpy99I | CGWCG | 2 cut(s) | 106, 152 |
| HpyAV | CCTTC | 1 cut(s) | 40 |
| HpyCH4III | ACNGT | 1 cut(s) | 81 |
| HpyCH4IV | ACGT | 1 cut(s) | 229 |
| HpyCH4V | TGCA | 1 cut(s) | 200 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 27, 36 |
| HpyF3I | CTNAG | 3 cut(s) | 17, 42, 211 |
| HpySE526I | ACGT | 1 cut(s) | 229 |
| Hsp92I | GRCGYC | 1 cut(s) | 147 |
| Kpn2I | TCCGGA | 1 cut(s) | 92 |
| Kzo9I | GATC | 3 cut(s) | 118, 207, 214 |
| LmnI | GCTCC | 5 cut(s) | 59, 74, 95, 164, 194 |
| LpnPI | CCDG | 3 cut(s) | 106, 137, 157 |
| Lsp1109I | GCAGC | 2 cut(s) | 154, 184 |
| MaeII | ACGT | 1 cut(s) | 229 |
| MalI | GATC | 3 cut(s) | 120, 209, 216 |
| MbiI | CCGCTC | 3 cut(s) | 39, 54, 69 |
| MboI | GATC | 3 cut(s) | 118, 207, 214 |
| MboII | GAAGA | 3 cut(s) | 25, 99, 145 |
| MflI | RGATCY | 2 cut(s) | 118, 214 |
| MmeI | TCCRAC | 1 cut(s) | 96 |
| MnlI | CCTC | 7 cut(s) | 26, 41, 121, 124, 167, 167, 170 |
| MroI | TCCGGA | 1 cut(s) | 92 |
| MspI | CCGG | 2 cut(s) | 93, 144 |
| MspR9I | CCNGG | 1 cut(s) | 144 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 27, 36 |
| NciI | CCSGG | 1 cut(s) | 144 |
| NdeII | GATC | 3 cut(s) | 118, 207, 214 |
| NlaIV | GGNNCC | 2 cut(s) | 91, 120 |
| PkrI | GCNGC | 2 cut(s) | 169, 199 |
| PspN4I | GGNNCC | 2 cut(s) | 91, 120 |
| PspPI | GGNCC | 1 cut(s) | 49 |
| PstI | CTGCAG | 1 cut(s) | 202 |
| PsuI | RGATCY | 2 cut(s) | 118, 214 |
| SatI | GCNGC | 2 cut(s) | 168, 198 |
| Sau3AI | GATC | 3 cut(s) | 118, 207, 214 |
| Sau96I | GGNCC | 1 cut(s) | 49 |
| ScrFI | CCNGG | 1 cut(s) | 144 |
| SetI | ASST | 3 cut(s) | 169, 199, 232 |
| SfcI | CTRYAG | 1 cut(s) | 198 |
| SgeI | CNNG | 9 cut(s) | 78, 105, 127, 136, 151, 155, 156, 173, 183 |
| SinI | GGWCC | 1 cut(s) | 49 |
| SsiI | CCGC | 4 cut(s) | 37, 52, 57, 67 |
| StyD4I | CCNGG | 1 cut(s) | 142 |
| TaaI | ACNGT | 1 cut(s) | 81 |
| TaiI | ACGT | 1 cut(s) | 232 |
| TseI | GCWGC | 2 cut(s) | 167, 197 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| VpaK11BI | GGWCC | 1 cut(s) | 49 |