Rroxscaffold_2G00121350
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
53939627 .. 53940799
1173 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00121350.1

Sequence Viewer

Length: 447 bp
ATGCAGGATGTTGATATTGATGAGGAGGTTGATGTTATAATTTCGAGTGGATGGGATACATGCTTCGTTGGAAGTGTCATTACAGCGAGAGATCGCTGGCTAAAACCTGGAGGTGTTATATTTCCTTCAAATGCAACCCCTTTCATCTTAAACTGGAATTCATGTTGCAGGTTTCATAGCTATGCATGCCACACTTGCCGCCGCAATGTGGACTGTTGTTTGATTCCAAATTCCCTCTTATTTCTTGAAGGACGAGGTGGACTTTTTGAGTTCATTGAAGAACGACTCAGAAAATGGACATATGGTCATTGTGATTGCCGAGGGAGCAGAACGGGATCTTCTTTCGCAGAGCTTGTAATCCATGAACCAGCAAGATGGAAACAAGCTACTAAAAGACGTTGGGTTATGGATATCTCGCAGGATCAAGGTGTTACTTGTAATCTGTAG

Protein Analysis

148

Amino Acids

16.97

Weight (kDa)

6.4

Isoelectric Point (pI)

62.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 38
Acc36I ACCTGC 1 cut(s) 159
AciI CCGC 2 cut(s) 199, 202
AclWI GGATC 2 cut(s) 343, 429
AcsI RAATTY 2 cut(s) 157, 229
AfiI CCNNNNNNNGG 1 cut(s) 208
AgsI TTSAA 3 cut(s) 129, 248, 278
AhdI GACNNNNNGTC 1 cut(s) 303
AjnI CCWGG 1 cut(s) 106
AluBI AGCT 3 cut(s) 180, 352, 386
AluI AGCT 3 cut(s) 180, 352, 386
AlwI GGATC 2 cut(s) 343, 429
ApoI RAATTY 2 cut(s) 157, 229
BarI GAAGNNNNNNTAC 2 cut(s) 64, 96
BccI CCATC 2 cut(s) 45, 369
BciT130I CCWGG 1 cut(s) 108
BciVI GTATCC 1 cut(s) 49
BfmI CTRYAG 1 cut(s) 443
BfuAI ACCTGC 1 cut(s) 159
BfuI GTATCC 1 cut(s) 49
BisI GCNGC 2 cut(s) 199, 202
BlsI GCNGC 2 cut(s) 200, 203
Bme1390I CCNGG 1 cut(s) 108
BmeRI GACNNNNNGTC 1 cut(s) 303
BmrFI CCNGG 1 cut(s) 108
BpmI CTGGAG 1 cut(s) 129
BsaJI CCNNGG 1 cut(s) 319
Bsc4I CCNNNNNNNGG 1 cut(s) 208
Bse1I ACTGG 1 cut(s) 158
Bse3DI GCAATG 1 cut(s) 211
BseBI CCWGG 1 cut(s) 108
BseDI CCNNGG 1 cut(s) 319
BseGI GGATG 2 cut(s) 13, 56
BseLI CCNNNNNNNGG 1 cut(s) 208
BseMI GCAATG 1 cut(s) 211
BseMII CTCAG 1 cut(s) 301
BseNI ACTGG 1 cut(s) 158
BseRI GAGGAG 1 cut(s) 38
BslI CCNNNNNNNGG 1 cut(s) 208
Bsp143I GATC 3 cut(s) 91, 335, 421
BspACI CCGC 2 cut(s) 199, 202
BspCNI CTCAG 1 cut(s) 300
BspMI ACCTGC 1 cut(s) 159
BspPI GGATC 2 cut(s) 343, 429
BsrDI GCAATG 1 cut(s) 211
BsrI ACTGG 1 cut(s) 158
BssECI CCNNGG 1 cut(s) 319
BssMI GATC 3 cut(s) 91, 335, 421
Bst2UI CCWGG 1 cut(s) 108
Bst4CI ACNGT 1 cut(s) 215
BstC8I GCNNGC 2 cut(s) 98, 187
BstDEI CTNAG 1 cut(s) 287
BstF5I GGATG 2 cut(s) 13, 56
BstKTI GATC 3 cut(s) 94, 338, 424
BstMBI GATC 3 cut(s) 91, 335, 421
BstMWI GCNNNNNNNGC 3 cut(s) 186, 195, 324
BstNI CCWGG 1 cut(s) 108
BstNSI RCATGY 2 cut(s) 63, 189
BstSCI CCNGG 1 cut(s) 106
BstSFI CTRYAG 1 cut(s) 443
BstX2I RGATCY 1 cut(s) 335
BstXI CCANNNNNNTGG 1 cut(s) 375
BstYI RGATCY 1 cut(s) 335
BsuI GTATCC 1 cut(s) 49
BtsCI GGATG 2 cut(s) 13, 56
BveI ACCTGC 1 cut(s) 159
Cac8I GCNNGC 2 cut(s) 98, 187
CviAII CATG 4 cut(s) 60, 162, 186, 362
CviJI RGCY 4 cut(s) 100, 180, 352, 386
CviKI_1 RGCY 4 cut(s) 100, 180, 352, 386
DdeI CTNAG 1 cut(s) 287
DpnI GATC 3 cut(s) 93, 337, 423
DpnII GATC 3 cut(s) 91, 335, 421
DriI GACNNNNNGTC 1 cut(s) 303
Eam1105I GACNNNNNGTC 1 cut(s) 303
Eco32I GATATC 1 cut(s) 412
EcoRI GAATTC 1 cut(s) 157
EcoRII CCWGG 1 cut(s) 106
EcoRV GATATC 1 cut(s) 412
EcoT22I ATGCAT 1 cut(s) 187
FaeI CATG 4 cut(s) 63, 165, 189, 365
FatI CATG 4 cut(s) 59, 161, 185, 361
FauNDI CATATG 1 cut(s) 301
Fnu4HI GCNGC 2 cut(s) 199, 202
FokI GGATG 2 cut(s) 20, 63
Fsp4HI GCNGC 2 cut(s) 199, 202
GluI GCNGC 2 cut(s) 199, 202
GsuI CTGGAG 1 cut(s) 129
Hin1II CATG 4 cut(s) 63, 165, 189, 365
HinfI GANTC 2 cut(s) 223, 285
Hpy166II GTNNAC 2 cut(s) 211, 260
Hpy188I TCNGA 1 cut(s) 290
Hpy188III TCNNGA 1 cut(s) 245
Hpy8I GTNNAC 2 cut(s) 211, 260
HpyAV CCTTC 2 cut(s) 135, 242
HpyCH4III ACNGT 1 cut(s) 215
HpyCH4IV ACGT 1 cut(s) 397
HpyCH4V TGCA 4 cut(s) 4, 134, 168, 185
HpyF10VI GCNNNNNNNGC 3 cut(s) 186, 195, 324
HpyF3I CTNAG 1 cut(s) 287
HpySE526I ACGT 1 cut(s) 397
Hsp92II CATG 4 cut(s) 63, 165, 189, 365
Kzo9I GATC 3 cut(s) 91, 335, 421
LmnI GCTCC 1 cut(s) 324
LpnPI CCDG 7 cut(s) 82, 93, 120, 139, 154, 381, 404
MaeII ACGT 1 cut(s) 397
MaeIII GTNAC 1 cut(s) 430
MalI GATC 3 cut(s) 93, 337, 423
MboI GATC 3 cut(s) 91, 335, 421
MboII GAAGA 2 cut(s) 290, 330
MflI RGATCY 1 cut(s) 335
MluCI AATT 3 cut(s) 39, 157, 229
MlyI GAGTC 1 cut(s) 279
MmeI TCCRAC 1 cut(s) 49
MnlI CCTC 6 cut(s) 16, 19, 104, 245, 248, 314
Mph1103I ATGCAT 1 cut(s) 187
MseI TTAA 1 cut(s) 149
MslI CAYNNNNRTG 1 cut(s) 180
MspR9I CCNGG 1 cut(s) 108
MvaI CCWGG 1 cut(s) 108
MwoI GCNNNNNNNGC 3 cut(s) 186, 195, 324
NdeI CATATG 1 cut(s) 301
NdeII GATC 3 cut(s) 91, 335, 421
NlaIII CATG 4 cut(s) 63, 165, 189, 365
NmeAIII GCCGAG 1 cut(s) 344
NsiI ATGCAT 1 cut(s) 187
NspI RCATGY 2 cut(s) 63, 189
PaeI GCATGC 1 cut(s) 189
PfeI GAWTC 1 cut(s) 223
PkrI GCNGC 2 cut(s) 200, 203
PleI GAGTC 1 cut(s) 279
PpsI GAGTC 1 cut(s) 279
PsiI TTATAA 1 cut(s) 38
Psp6I CCWGG 1 cut(s) 106
PspGI CCWGG 1 cut(s) 106
PsuI RGATCY 1 cut(s) 335
RseI CAYNNNNRTG 1 cut(s) 180
SaqAI TTAA 1 cut(s) 149
SatI GCNGC 2 cut(s) 199, 202
Sau3AI GATC 3 cut(s) 91, 335, 421
SchI GAGTC 1 cut(s) 279
ScrFI CCNGG 1 cut(s) 108
SfcI CTRYAG 1 cut(s) 443
SmiMI CAYNNNNRTG 1 cut(s) 180
SphI GCATGC 1 cut(s) 189
Sse9I AATT 3 cut(s) 39, 157, 229
SsiI CCGC 2 cut(s) 199, 202
StyD4I CCNGG 1 cut(s) 106
TaaI ACNGT 1 cut(s) 215
TaiI ACGT 1 cut(s) 400
TaqI TCGA 1 cut(s) 44
TasI AATT 3 cut(s) 39, 157, 229
TauI GCSGC 2 cut(s) 201, 204
TfiI GAWTC 1 cut(s) 223
Tru1I TTAA 1 cut(s) 149
Tru9I TTAA 1 cut(s) 149
TspDTI ATGAA 5 cut(s) 133, 150, 164, 262, 378
XapI RAATTY 2 cut(s) 157, 229
XceI RCATGY 2 cut(s) 63, 189
Zsp2I ATGCAT 1 cut(s) 187
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.