Belongs to the actin family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1274200.v1.1 |
| pyrus_communis | pycom16g17950 |
| rosa_chinensis | RchiOBHm_Chr6g0280461 |
| rosa_laevigata | RLG00000001370 RLG00000009404 RLG00000030247 |
| rosa_multiflora | Rmu_sc0001643.1_g000028 |
| rosa_roxburghii | Rroxscaffold_1G00033380 Rroxscaffold_2G00103630 Rroxscaffold_2G00115110 Rroxscaffold_2G00121350 Rroxscaffold_2G00135900 Rroxscaffold_2G00147680 Rroxscaffold_2G00151240 Rroxscaffold_2G00154830 Rroxscaffold_3G00252750 Rroxscaffold_3G00265210 Rroxscaffold_4G00319380 Rroxscaffold_5G00336640 Rroxscaffold_5G00345850 Rroxscaffold_5G00362620 Rroxscaffold_6G00395390 Rroxscaffold_7G00213840 |
| rosa_samantha | Rh2DG086400 Rh2DG086500 Rh3CG266000 Rh5AG437300 Rh5AG440100 Rh5DG008900 Rh5DG439400 Rh6BG460500 Rh6BG487900 Rh6CG493000 Rh7BG326500 Rh7CG102300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 10 |
| AcsI | RAATTY | 1 cut(s) | 67 |
| AgsI | TTSAA | 2 cut(s) | 16, 34 |
| AluBI | AGCT | 1 cut(s) | 85 |
| AluI | AGCT | 1 cut(s) | 85 |
| ApeKI | GCWGC | 1 cut(s) | 137 |
| ApoI | RAATTY | 1 cut(s) | 67 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 71 |
| BbsI | GAAGAC | 1 cut(s) | 174 |
| BbvI | GCAGC | 1 cut(s) | 149 |
| BccI | CCATC | 1 cut(s) | 98 |
| BisI | GCNGC | 1 cut(s) | 138 |
| BlsI | GCNGC | 1 cut(s) | 139 |
| BpiI | GAAGAC | 1 cut(s) | 174 |
| BsaWI | WCCGGW | 1 cut(s) | 147 |
| BseMII | CTCAG | 1 cut(s) | 54 |
| BseXI | GCAGC | 1 cut(s) | 149 |
| BsiSI | CCGG | 1 cut(s) | 148 |
| BslFI | GGGAC | 1 cut(s) | 108 |
| BsmFI | GGGAC | 1 cut(s) | 108 |
| BspACI | CCGC | 1 cut(s) | 10 |
| BspCNI | CTCAG | 1 cut(s) | 55 |
| Bst4CI | ACNGT | 1 cut(s) | 42 |
| BstC8I | GCNNGC | 1 cut(s) | 83 |
| BstDEI | CTNAG | 1 cut(s) | 63 |
| BstV1I | GCAGC | 1 cut(s) | 149 |
| BstV2I | GAAGAC | 1 cut(s) | 174 |
| Cac8I | GCNNGC | 1 cut(s) | 83 |
| CseI | GACGC | 1 cut(s) | 105 |
| CviJI | RGCY | 2 cut(s) | 29, 85 |
| CviKI_1 | RGCY | 2 cut(s) | 29, 85 |
| DdeI | CTNAG | 1 cut(s) | 63 |
| EcoRI | GAATTC | 1 cut(s) | 67 |
| FaiI | YATR | 2 cut(s) | 162, 188 |
| FaqI | GGGAC | 1 cut(s) | 108 |
| Fnu4HI | GCNGC | 1 cut(s) | 138 |
| Fsp4HI | GCNGC | 1 cut(s) | 138 |
| GluI | GCNGC | 1 cut(s) | 138 |
| HapII | CCGG | 1 cut(s) | 148 |
| HgaI | GACGC | 1 cut(s) | 105 |
| HinfI | GANTC | 1 cut(s) | 170 |
| HpaII | CCGG | 1 cut(s) | 148 |
| HpyCH4III | ACNGT | 1 cut(s) | 42 |
| HpyCH4V | TGCA | 1 cut(s) | 23 |
| HpyF3I | CTNAG | 1 cut(s) | 63 |
| LpnPI | CCDG | 1 cut(s) | 161 |
| Lsp1109I | GCAGC | 1 cut(s) | 149 |
| MboII | GAAGA | 4 cut(s) | 28, 46, 65, 174 |
| MluCI | AATT | 2 cut(s) | 67, 175 |
| MlyI | GAGTC | 1 cut(s) | 164 |
| MnlI | CCTC | 1 cut(s) | 124 |
| MroXI | GAANNNNTTC | 1 cut(s) | 71 |
| MseI | TTAA | 2 cut(s) | 48, 144 |
| MspI | CCGG | 1 cut(s) | 148 |
| PdmI | GAANNNNTTC | 1 cut(s) | 71 |
| PkrI | GCNGC | 1 cut(s) | 139 |
| PleI | GAGTC | 1 cut(s) | 164 |
| PpsI | GAGTC | 1 cut(s) | 164 |
| SaqAI | TTAA | 2 cut(s) | 48, 144 |
| SatI | GCNGC | 1 cut(s) | 138 |
| SchI | GAGTC | 1 cut(s) | 164 |
| SetI | ASST | 1 cut(s) | 87 |
| SgeI | CNNG | 5 cut(s) | 43, 90, 94, 101, 160 |
| Sse9I | AATT | 2 cut(s) | 67, 175 |
| SsiI | CCGC | 1 cut(s) | 10 |
| SspI | AATATT | 1 cut(s) | 124 |
| TaaI | ACNGT | 1 cut(s) | 42 |
| TasI | AATT | 2 cut(s) | 67, 175 |
| Tru1I | TTAA | 2 cut(s) | 48, 144 |
| Tru9I | TTAA | 2 cut(s) | 48, 144 |
| TseI | GCWGC | 1 cut(s) | 137 |
| TspDTI | ATGAA | 1 cut(s) | 66 |
| XapI | RAATTY | 1 cut(s) | 67 |
| XmnI | GAANNNNTTC | 1 cut(s) | 71 |