Rroxscaffold_5G00345850

Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
16407832 .. 16415733
7902 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_5G00345850.1

Sequence Viewer

Length: 654 bp
ATGAAAATAATAGTACCAAGTTGGACATTATTTCTCGACCTTGCATTAAATTATCAATTGAAAGATCCAGAAAAATGGGTGGCTGATGATTCAATTAGCTCAACTATAGAATCCTTGTGCAAGTATGCAGCTTCGTCAAGTTTCATAGCTAGGCATGCCACACTTGCCGGTCACAATGTGGACTGTTGTTTGATTCCGCATTCCCCCTTATTTCTTGAAGGACGAGGTGGACTTTTTGAGTTCATTGAAGAACGACTCAGAAAATGGAGATATGGTTATTGTGATTGCCGAGGGAGCAGGACGGGATCTTCTTTCGCAGAGCTTGTAATCCATGAACCAGCAAGATGCTTCAGAAACAAGCTACTAAAAGACGTTGGGTTATGGATATCTCGTAGGATCAAGCTCGTGGAGAATCAACAAGCACAAAACACACTTGTCGTTCATCCCGTGGAAGAACACTCACCAAGTGACACCACTCGTGGCCTAAATCCGATCAAGATCAAGCCTCTACAGCCCTTAGTCAATCGTCTTCCTCAAATTGTCAACATAACAAGAAGTTCACACTACAATCGTTTGATTCAAGTTCAAGTGCTTGCCACCCTTGGATCAAATCAACGTTGGAGTGAGGAGATTCTTGTGAAAGTGCATCTATAG
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

217

Amino Acids

24.78

Weight (kDa)

9.08

Isoelectric Point (pI)

51.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 197
AclI AACGTT 1 cut(s) 616
AclWI GGATC 4 cut(s) 59, 313, 404, 613
AcuI CTGAAG 1 cut(s) 334
AdeI CACNNNGTG 2 cut(s) 178, 467
AfaI GTAC 1 cut(s) 15
AgsI TTSAA 6 cut(s) 61, 93, 218, 248, 581, 587
AluBI AGCT 6 cut(s) 99, 131, 149, 322, 361, 403
AluI AGCT 6 cut(s) 99, 131, 149, 322, 361, 403
AlwI GGATC 4 cut(s) 59, 313, 404, 613
AoxI GGCC 1 cut(s) 481
ApeKI GCWGC 1 cut(s) 128
AsuHPI GGTGA 1 cut(s) 453
BauI CACGAG 2 cut(s) 404, 477
BbsI GAAGAC 1 cut(s) 521
BbvI GCAGC 1 cut(s) 140
BfaI CTAG 1 cut(s) 150
BfmI CTRYAG 3 cut(s) 105, 509, 650
BisI GCNGC 1 cut(s) 129
BlsI GCNGC 1 cut(s) 130
BmsI GCATC 1 cut(s) 335
BpiI GAAGAC 1 cut(s) 521
BsaBI GATNNNNATC 1 cut(s) 497
BsaJI CCNNGG 3 cut(s) 289, 447, 601
BsaXI ACNNNNNCTCC 2 cut(s) 259, 289
Bse118I RCCGGY 1 cut(s) 167
Bse8I GATNNNNATC 1 cut(s) 497
BseDI CCNNGG 3 cut(s) 289, 447, 601
BseGI GGATG 1 cut(s) 442
BseJI GATNNNNATC 1 cut(s) 497
BseMII CTCAG 1 cut(s) 271
BseRI GAGGAG 1 cut(s) 641
BseXI GCAGC 1 cut(s) 140
BshFI GGCC 1 cut(s) 483
BsiSI CCGG 1 cut(s) 168
BsmI GAATGC 1 cut(s) 199
BsnI GGCC 1 cut(s) 483
Bsp143I GATC 6 cut(s) 64, 305, 396, 492, 498, 605
BspACI CCGC 1 cut(s) 197
BspANI GGCC 1 cut(s) 483
BspCNI CTCAG 1 cut(s) 270
BspPI GGATC 4 cut(s) 59, 313, 404, 613
BsrFI RCCGGY 1 cut(s) 167
BssAI RCCGGY 1 cut(s) 167
BssECI CCNNGG 3 cut(s) 289, 447, 601
BssMI GATC 6 cut(s) 64, 305, 396, 492, 498, 605
BssSI CACGAG 2 cut(s) 404, 477
BssT1I CCWWGG 1 cut(s) 601
Bst2BI CACGAG 2 cut(s) 404, 477
Bst4CI ACNGT 1 cut(s) 185
BstC8I GCNNGC 2 cut(s) 156, 594
BstDEI CTNAG 2 cut(s) 257, 517
BstDSI CCRYGG 1 cut(s) 447
BstF5I GGATG 1 cut(s) 442
BstKTI GATC 6 cut(s) 67, 308, 399, 495, 501, 608
BstMBI GATC 6 cut(s) 64, 305, 396, 492, 498, 605
BstMWI GCNNNNNNNGC 4 cut(s) 155, 164, 294, 511
BstNSI RCATGY 1 cut(s) 158
BstSFI CTRYAG 3 cut(s) 105, 509, 650
BstV1I GCAGC 1 cut(s) 140
BstV2I GAAGAC 1 cut(s) 521
BstX2I RGATCY 2 cut(s) 64, 305
BstXI CCANNNNNNTGG 1 cut(s) 75
BstYI RGATCY 2 cut(s) 64, 305
BsuRI GGCC 1 cut(s) 483
BtgI CCRYGG 1 cut(s) 447
BtsCI GGATG 1 cut(s) 442
Cac8I GCNNGC 2 cut(s) 156, 594
Cfr10I RCCGGY 1 cut(s) 167
Csp6I GTAC 1 cut(s) 14
CviAII CATG 2 cut(s) 155, 332
CviQI GTAC 1 cut(s) 14
DdeI CTNAG 2 cut(s) 257, 517
DpnI GATC 6 cut(s) 66, 307, 398, 494, 500, 607
DpnII GATC 6 cut(s) 64, 305, 396, 492, 498, 605
DraIII CACNNNGTG 2 cut(s) 178, 467
Eco130I CCWWGG 1 cut(s) 601
Eco32I GATATC 1 cut(s) 387
Eco57I CTGAAG 1 cut(s) 334
EcoRV GATATC 1 cut(s) 387
EcoT14I CCWWGG 1 cut(s) 601
ErhI CCWWGG 1 cut(s) 601
FaeI CATG 2 cut(s) 158, 335
FaiI YATR 9 cut(s) 107, 126, 146, 156, 273, 333, 382, 548, 652
FatI CATG 2 cut(s) 154, 331
Fnu4HI GCNGC 1 cut(s) 129
FokI GGATG 1 cut(s) 429
Fsp4HI GCNGC 1 cut(s) 129
FspBI CTAG 1 cut(s) 150
GluI GCNGC 1 cut(s) 129
HaeIII GGCC 1 cut(s) 483
HapII CCGG 1 cut(s) 168
Hin1II CATG 2 cut(s) 158, 335
HincII GTYRAC 1 cut(s) 544
HindII GTYRAC 1 cut(s) 544
HinfI GANTC 7 cut(s) 89, 110, 193, 255, 412, 577, 631
HpaII CCGG 1 cut(s) 168
HphI GGTGA 1 cut(s) 453
Hpy166II GTNNAC 4 cut(s) 181, 230, 544, 560
Hpy188I TCNGA 3 cut(s) 260, 353, 492
Hpy188III TCNNGA 4 cut(s) 35, 68, 215, 496
Hpy8I GTNNAC 4 cut(s) 181, 230, 544, 560
HpyAV CCTTC 1 cut(s) 212
HpyCH4III ACNGT 1 cut(s) 185
HpyCH4IV ACGT 2 cut(s) 372, 616
HpyCH4V TGCA 4 cut(s) 44, 120, 128, 646
HpyF10VI GCNNNNNNNGC 4 cut(s) 155, 164, 294, 511
HpyF3I CTNAG 2 cut(s) 257, 517
HpySE526I ACGT 2 cut(s) 372, 616
Hsp92II CATG 2 cut(s) 158, 335
Kzo9I GATC 6 cut(s) 64, 305, 396, 492, 498, 605
LmnI GCTCC 1 cut(s) 294
LpnPI CCDG 4 cut(s) 81, 181, 283, 351
Lsp1109I GCAGC 1 cut(s) 140
LweI GCATC 1 cut(s) 335
MaeI CTAG 1 cut(s) 150
MaeII ACGT 2 cut(s) 372, 616
MaeIII GTNAC 2 cut(s) 170, 467
MalI GATC 6 cut(s) 66, 307, 398, 494, 500, 607
MboI GATC 6 cut(s) 64, 305, 396, 492, 498, 605
MboII GAAGA 4 cut(s) 260, 300, 464, 521
MfeI CAATTG 1 cut(s) 56
MflI RGATCY 2 cut(s) 64, 305
MluCI AATT 4 cut(s) 49, 56, 93, 537
MlyI GAGTC 1 cut(s) 249
MmeI TCCRAC 1 cut(s) 599
MnlI CCTC 5 cut(s) 218, 284, 516, 543, 619
MseI TTAA 1 cut(s) 47
MspI CCGG 1 cut(s) 168
MunI CAATTG 1 cut(s) 56
Mva1269I GAATGC 1 cut(s) 199
MwoI GCNNNNNNNGC 4 cut(s) 155, 164, 294, 511
NdeII GATC 6 cut(s) 64, 305, 396, 492, 498, 605
NlaIII CATG 2 cut(s) 158, 335
NmeAIII GCCGAG 1 cut(s) 314
NmuCI GTSAC 2 cut(s) 170, 467
NspI RCATGY 1 cut(s) 158
PaeI GCATGC 1 cut(s) 158
PcsI WCGNNNNNNNCGW 1 cut(s) 444
PctI GAATGC 1 cut(s) 199
PfeI GAWTC 6 cut(s) 89, 110, 193, 412, 577, 631
PkrI GCNGC 1 cut(s) 130
PleI GAGTC 1 cut(s) 249
PpsI GAGTC 1 cut(s) 249
Psp1406I AACGTT 1 cut(s) 616
PsuI RGATCY 2 cut(s) 64, 305
RsaI GTAC 1 cut(s) 15
RsaNI GTAC 1 cut(s) 14
SaqAI TTAA 1 cut(s) 47
SatI GCNGC 1 cut(s) 129
Sau3AI GATC 6 cut(s) 64, 305, 396, 492, 498, 605
SchI GAGTC 1 cut(s) 249
SfaNI GCATC 1 cut(s) 335
SfcI CTRYAG 3 cut(s) 105, 509, 650
SphI GCATGC 1 cut(s) 158
Sse9I AATT 4 cut(s) 49, 56, 93, 537
SsiI CCGC 1 cut(s) 197
SspMI CTAG 1 cut(s) 150
StyI CCWWGG 1 cut(s) 601
TaaI ACNGT 1 cut(s) 185
TaiI ACGT 2 cut(s) 375, 619
TaqI TCGA 1 cut(s) 36
TasI AATT 4 cut(s) 49, 56, 93, 537
TfiI GAWTC 6 cut(s) 89, 110, 193, 412, 577, 631
Tru1I TTAA 1 cut(s) 47
Tru9I TTAA 1 cut(s) 47
TseFI GTSAC 2 cut(s) 170, 467
TseI GCWGC 1 cut(s) 128
Tsp45I GTSAC 2 cut(s) 170, 467
TspDTI ATGAA 5 cut(s) 17, 133, 232, 348, 431
XceI RCATGY 1 cut(s) 158
XspI CTAG 1 cut(s) 150
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.