Rh6BG487900

ADP-ribosylation factor GTPase-activating protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Reverse (-)
69194045 .. 69197946
3902 bp
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UTR
Exon/CDS
Intron
Rh6BG487900.1

Sequence Viewer

Length: 240 bp
ATGGTTCTTCCTCTGAAAACCCACGACCCGACACAGATACCACCGGCTTTGCCCGCCTTCATCTCCGCCATGCAAGTACAAGTCGCTTCGCGCGAAGCTACTTACTTGAGGTTATCTGTTGTTTCTCAGGGAATTGGTAGGCTATCTTTGGTTGCTGCATCTACAGCTCAATCAGCTGCAACTGTAGTACAGGCTGGCACAAAAAGCTTACCTCTAAGCATTTCAGGAGGAGATACATGA
Functional Annotation

Protein Analysis

79

Amino Acids

8.07

Weight (kDa)

9.69

Isoelectric Point (pI)

29.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 91, 93
AciI CCGC 2 cut(s) 54, 66
AfaI GTAC 2 cut(s) 78, 189
AluBI AGCT 4 cut(s) 98, 167, 176, 207
AluI AGCT 4 cut(s) 98, 167, 176, 207
ApeKI GCWGC 2 cut(s) 155, 176
AspLEI GCGC 1 cut(s) 93
BbvI GCAGC 2 cut(s) 142, 163
BfmI CTRYAG 2 cut(s) 162, 183
BisI GCNGC 2 cut(s) 156, 177
BlsI GCNGC 2 cut(s) 157, 178
BmsI GCATC 1 cut(s) 167
BpuEI CTTGAG 1 cut(s) 127
Bse118I RCCGGY 1 cut(s) 43
BseMII CTCAG 1 cut(s) 140
BseXI GCAGC 2 cut(s) 142, 163
Bsh1236I CGCG 2 cut(s) 91, 93
BsiSI CCGG 1 cut(s) 44
BspACI CCGC 2 cut(s) 54, 66
BspCNI CTCAG 1 cut(s) 139
BspFNI CGCG 2 cut(s) 91, 93
BsrFI RCCGGY 1 cut(s) 43
BssAI RCCGGY 1 cut(s) 43
Bst4CI ACNGT 1 cut(s) 184
BstC8I GCNNGC 2 cut(s) 54, 196
BstDEI CTNAG 2 cut(s) 126, 215
BstFNI CGCG 2 cut(s) 91, 93
BstHHI GCGC 1 cut(s) 93
BstMWI GCNNNNNNNGC 4 cut(s) 53, 164, 173, 204
BstSFI CTRYAG 2 cut(s) 162, 183
BstUI CGCG 2 cut(s) 91, 93
BstV1I GCAGC 2 cut(s) 142, 163
Cac8I GCNNGC 2 cut(s) 54, 196
CfoI GCGC 1 cut(s) 93
Cfr10I RCCGGY 1 cut(s) 43
Csp6I GTAC 2 cut(s) 77, 188
CspCI CAANNNNNGTGG 2 cut(s) 30, 65
CviAII CATG 2 cut(s) 70, 237
CviJI RGCY 7 cut(s) 47, 98, 142, 167, 176, 194, 207
CviKI_1 RGCY 7 cut(s) 47, 98, 142, 167, 176, 194, 207
CviQI GTAC 2 cut(s) 77, 188
DdeI CTNAG 2 cut(s) 126, 215
EciI GGCGGA 1 cut(s) 55
FaeI CATG 2 cut(s) 73, 240
FaiI YATR 2 cut(s) 71, 238
FatI CATG 2 cut(s) 69, 236
FauI CCCGC 1 cut(s) 61
Fnu4HI GCNGC 2 cut(s) 156, 177
Fsp4HI GCNGC 2 cut(s) 156, 177
GlaI GCGC 1 cut(s) 92
GluI GCNGC 2 cut(s) 156, 177
HapII CCGG 1 cut(s) 44
HhaI GCGC 1 cut(s) 93
Hin1II CATG 2 cut(s) 73, 240
Hin6I GCGC 1 cut(s) 91
HinP1I GCGC 1 cut(s) 91
HindIII AAGCTT 1 cut(s) 205
HpaII CCGG 1 cut(s) 44
Hpy188I TCNGA 1 cut(s) 15
Hpy188III TCNNGA 1 cut(s) 225
HpyAV CCTTC 1 cut(s) 67
HpyCH4III ACNGT 1 cut(s) 184
HpyCH4V TGCA 3 cut(s) 73, 158, 179
HpyF10VI GCNNNNNNNGC 4 cut(s) 53, 164, 173, 204
HpyF3I CTNAG 2 cut(s) 126, 215
Hsp92II CATG 2 cut(s) 73, 240
HspAI GCGC 1 cut(s) 91
LpnPI CCDG 5 cut(s) 57, 113, 176, 180, 210
Lsp1109I GCAGC 2 cut(s) 142, 163
LweI GCATC 1 cut(s) 167
MluCI AATT 1 cut(s) 132
MnlI CCTC 4 cut(s) 21, 102, 221, 222
MspA1I CMGCKG 1 cut(s) 176
MspI CCGG 1 cut(s) 44
MvnI CGCG 2 cut(s) 91, 93
MwoI GCNNNNNNNGC 4 cut(s) 53, 164, 173, 204
NlaIII CATG 2 cut(s) 73, 240
PcsI WCGNNNNNNNCGW 1 cut(s) 90
PkrI GCNGC 2 cut(s) 157, 178
PvuII CAGCTG 1 cut(s) 176
RsaI GTAC 2 cut(s) 78, 189
RsaNI GTAC 2 cut(s) 77, 188
SatI GCNGC 2 cut(s) 156, 177
SetI ASST 6 cut(s) 100, 113, 169, 178, 209, 214
SfaNI GCATC 1 cut(s) 167
SfcI CTRYAG 2 cut(s) 162, 183
SmlI CTYRAG 1 cut(s) 106
SmoI CTYRAG 1 cut(s) 106
Sse9I AATT 1 cut(s) 132
SsiI CCGC 2 cut(s) 54, 66
TaaI ACNGT 1 cut(s) 184
TasI AATT 1 cut(s) 132
TatI WGTACW 2 cut(s) 76, 187
TseI GCWGC 2 cut(s) 155, 176
TspDTI ATGAA 1 cut(s) 49
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.