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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g07420 |
| rosa_laevigata | RLG00000000660 RLG00000002907 RLG00000007972 RLG00000009435 |
| rosa_multiflora | Rmu_sc0005072.1_g000009 Rmu_sc0024469.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00121510 |
| rosa_rugosa | Rorug05G0102500 Rorug07G0132700 |
| rosa_samantha | Rh1AG344800 Rh1BG170200 Rh1CG262000 Rh2AG051400 Rh2BG245700 Rh2DG331100 Rh3BG137600 Rh3DG139000 Rh3DG303000 Rh5AG377200 Rh5BG534400 Rh6AG001100 Rh7AG343400 Rh7BG401400 Rh7CG360900 Rh7CG470900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 12, 202 |
| AciI | CCGC | 3 cut(s) | 10, 40, 43 |
| Alw26I | GTCTC | 1 cut(s) | 342 |
| AoxI | GGCC | 1 cut(s) | 46 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 174, 206 |
| AspLEI | GCGC | 1 cut(s) | 286 |
| AspS9I | GGNCC | 3 cut(s) | 46, 222, 227 |
| AsuC2I | CCSGG | 2 cut(s) | 231, 258 |
| AvaII | GGWCC | 2 cut(s) | 222, 227 |
| BaeGI | GKGCMC | 2 cut(s) | 207, 263 |
| BanI | GGYRCC | 2 cut(s) | 12, 202 |
| BccI | CCATC | 1 cut(s) | 76 |
| BceAI | ACGGC | 2 cut(s) | 23, 44 |
| BcnI | CCSGG | 2 cut(s) | 231, 258 |
| BcoDI | GTCTC | 1 cut(s) | 342 |
| BfaI | CTAG | 1 cut(s) | 74 |
| BisI | GCNGC | 1 cut(s) | 41 |
| BlsI | GCNGC | 1 cut(s) | 42 |
| Bme1390I | CCNGG | 2 cut(s) | 231, 258 |
| Bme18I | GGWCC | 2 cut(s) | 222, 227 |
| BmgT120I | GGNCC | 3 cut(s) | 46, 222, 227 |
| BmiI | GGNNCC | 3 cut(s) | 14, 47, 204 |
| BmrFI | CCNGG | 2 cut(s) | 231, 258 |
| BmsI | GCATC | 1 cut(s) | 271 |
| BpuMI | CCSGG | 2 cut(s) | 231, 258 |
| BsaI | GGTCTC | 1 cut(s) | 342 |
| BsaJI | CCNNGG | 1 cut(s) | 49 |
| BsaWI | WCCGGW | 1 cut(s) | 224 |
| Bse118I | RCCGGY | 2 cut(s) | 219, 266 |
| Bse1I | ACTGG | 1 cut(s) | 252 |
| Bse3DI | GCAATG | 2 cut(s) | 103, 130 |
| BseDI | CCNNGG | 1 cut(s) | 49 |
| BseMI | GCAATG | 2 cut(s) | 103, 130 |
| BseNI | ACTGG | 1 cut(s) | 252 |
| BseSI | GKGCMC | 2 cut(s) | 207, 263 |
| Bsh1285I | CGRYCG | 1 cut(s) | 267 |
| BshFI | GGCC | 1 cut(s) | 48 |
| BshNI | GGYRCC | 2 cut(s) | 12, 202 |
| BsiEI | CGRYCG | 1 cut(s) | 267 |
| BsiSI | CCGG | 5 cut(s) | 220, 225, 230, 257, 267 |
| BsmAI | GTCTC | 1 cut(s) | 342 |
| BsnI | GGCC | 1 cut(s) | 48 |
| Bso31I | GGTCTC | 1 cut(s) | 342 |
| Bsp1286I | GDGCHC | 2 cut(s) | 207, 263 |
| BspACI | CCGC | 3 cut(s) | 10, 40, 43 |
| BspANI | GGCC | 1 cut(s) | 48 |
| BspLI | GGNNCC | 3 cut(s) | 14, 47, 204 |
| BspT107I | GGYRCC | 2 cut(s) | 12, 202 |
| BspTNI | GGTCTC | 1 cut(s) | 342 |
| BsrDI | GCAATG | 2 cut(s) | 103, 130 |
| BsrFI | RCCGGY | 2 cut(s) | 219, 266 |
| BsrI | ACTGG | 1 cut(s) | 252 |
| BssAI | RCCGGY | 2 cut(s) | 219, 266 |
| BssECI | CCNNGG | 1 cut(s) | 49 |
| Bst4CI | ACNGT | 2 cut(s) | 186, 247 |
| BstC8I | GCNNGC | 1 cut(s) | 293 |
| BstHHI | GCGC | 1 cut(s) | 286 |
| BstMAI | GTCTC | 1 cut(s) | 342 |
| BstMCI | CGRYCG | 1 cut(s) | 267 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 37, 267, 292, 297 |
| BstSCI | CCNGG | 2 cut(s) | 229, 256 |
| BstSLI | GKGCMC | 2 cut(s) | 207, 263 |
| BsuRI | GGCC | 1 cut(s) | 48 |
| Cac8I | GCNNGC | 1 cut(s) | 293 |
| CfoI | GCGC | 1 cut(s) | 286 |
| Cfr10I | RCCGGY | 2 cut(s) | 219, 266 |
| Cfr13I | GGNCC | 3 cut(s) | 46, 222, 227 |
| CpoI | CGGWCCG | 2 cut(s) | 222, 227 |
| CspI | CGGWCCG | 2 cut(s) | 222, 227 |
| CviJI | RGCY | 5 cut(s) | 48, 157, 179, 270, 300 |
| CviKI_1 | RGCY | 5 cut(s) | 48, 157, 179, 270, 300 |
| Eco31I | GGTCTC | 1 cut(s) | 342 |
| Eco47I | GGWCC | 2 cut(s) | 222, 227 |
| EcoO109I | RGGNCCY | 1 cut(s) | 46 |
| FauI | CCCGC | 1 cut(s) | 36 |
| Fnu4HI | GCNGC | 1 cut(s) | 41 |
| Fsp4HI | GCNGC | 1 cut(s) | 41 |
| FspBI | CTAG | 1 cut(s) | 74 |
| GlaI | GCGC | 1 cut(s) | 285 |
| GluI | GCNGC | 1 cut(s) | 41 |
| HaeIII | GGCC | 1 cut(s) | 48 |
| HapII | CCGG | 5 cut(s) | 220, 225, 230, 257, 267 |
| HhaI | GCGC | 1 cut(s) | 286 |
| Hin6I | GCGC | 1 cut(s) | 284 |
| HinP1I | GCGC | 1 cut(s) | 284 |
| HpaII | CCGG | 5 cut(s) | 220, 225, 230, 257, 267 |
| Hpy188I | TCNGA | 1 cut(s) | 347 |
| Hpy99I | CGWCG | 3 cut(s) | 23, 190, 247 |
| HpyAV | CCTTC | 2 cut(s) | 51, 297 |
| HpyCH4III | ACNGT | 2 cut(s) | 186, 247 |
| HpyCH4V | TGCA | 1 cut(s) | 110 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 37, 267, 292, 297 |
| HspAI | GCGC | 1 cut(s) | 284 |
| LpnPI | CCDG | 6 cut(s) | 233, 238, 243, 265, 270, 280 |
| LweI | GCATC | 1 cut(s) | 271 |
| MaeI | CTAG | 1 cut(s) | 74 |
| MboII | GAAGA | 1 cut(s) | 290 |
| MhlI | GDGCHC | 2 cut(s) | 207, 263 |
| MluCI | AATT | 1 cut(s) | 77 |
| MnlI | CCTC | 3 cut(s) | 17, 30, 59 |
| MspI | CCGG | 5 cut(s) | 220, 225, 230, 257, 267 |
| MspR9I | CCNGG | 2 cut(s) | 231, 258 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 37, 267, 292, 297 |
| NciI | CCSGG | 2 cut(s) | 231, 258 |
| NlaIV | GGNNCC | 3 cut(s) | 14, 47, 204 |
| NmeAIII | GCCGAG | 1 cut(s) | 312 |
| PflFI | GACNNNGTC | 1 cut(s) | 247 |
| PkrI | GCNGC | 1 cut(s) | 42 |
| PspN4I | GGNNCC | 3 cut(s) | 14, 47, 204 |
| PspPI | GGNCC | 3 cut(s) | 46, 222, 227 |
| PsyI | GACNNNGTC | 1 cut(s) | 247 |
| Rsr2I | CGGWCCG | 2 cut(s) | 222, 227 |
| RsrII | CGGWCCG | 2 cut(s) | 222, 227 |
| SatI | GCNGC | 1 cut(s) | 41 |
| Sau96I | GGNCC | 3 cut(s) | 46, 222, 227 |
| ScrFI | CCNGG | 2 cut(s) | 231, 258 |
| SduI | GDGCHC | 2 cut(s) | 207, 263 |
| SetI | ASST | 1 cut(s) | 67 |
| SfaNI | GCATC | 1 cut(s) | 271 |
| SinI | GGWCC | 2 cut(s) | 222, 227 |
| Sse9I | AATT | 1 cut(s) | 77 |
| SsiI | CCGC | 3 cut(s) | 10, 40, 43 |
| SspMI | CTAG | 1 cut(s) | 74 |
| StyD4I | CCNGG | 2 cut(s) | 229, 256 |
| TaaI | ACNGT | 2 cut(s) | 186, 247 |
| TaqII | GACCGA | 1 cut(s) | 178 |
| TasI | AATT | 1 cut(s) | 77 |
| TauI | GCSGC | 1 cut(s) | 43 |
| TspGWI | ACGGA | 1 cut(s) | 36 |
| Tth111I | GACNNNGTC | 1 cut(s) | 247 |
| VpaK11BI | GGWCC | 2 cut(s) | 222, 227 |
| XspI | CTAG | 1 cut(s) | 74 |