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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g07420 |
| rosa_laevigata | RLG00000000660 RLG00000002907 RLG00000007972 RLG00000009435 |
| rosa_multiflora | Rmu_sc0005072.1_g000009 Rmu_sc0024469.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00121510 |
| rosa_rugosa | Rorug05G0102500 Rorug07G0132700 |
| rosa_samantha | Rh1AG344800 Rh1BG170200 Rh1CG262000 Rh2AG051400 Rh2BG245700 Rh2DG331100 Rh3BG137600 Rh3DG139000 Rh3DG303000 Rh5AG377200 Rh5BG534400 Rh6AG001100 Rh7AG343400 Rh7BG401400 Rh7CG360900 Rh7CG470900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 8, 131 |
| Acc36I | ACCTGC | 2 cut(s) | 8, 131 |
| AccII | CGCG | 1 cut(s) | 107 |
| AciI | CCGC | 1 cut(s) | 107 |
| AclWI | GGATC | 1 cut(s) | 117 |
| AcyI | GRCGYC | 1 cut(s) | 51 |
| AjiI | CACGTC | 2 cut(s) | 124, 166 |
| Alw26I | GTCTC | 2 cut(s) | 21, 144 |
| AlwI | GGATC | 1 cut(s) | 117 |
| AspA2I | CCTAGG | 2 cut(s) | 76, 199 |
| AspLEI | GCGC | 1 cut(s) | 119 |
| AspS9I | GGNCC | 2 cut(s) | 73, 196 |
| AvaII | GGWCC | 2 cut(s) | 73, 196 |
| AvrII | CCTAGG | 2 cut(s) | 76, 199 |
| BcoDI | GTCTC | 2 cut(s) | 21, 144 |
| BfaI | CTAG | 2 cut(s) | 77, 200 |
| BfoI | RGCGCY | 1 cut(s) | 120 |
| BfuAI | ACCTGC | 2 cut(s) | 8, 131 |
| BlnI | CCTAGG | 2 cut(s) | 76, 199 |
| Bme18I | GGWCC | 2 cut(s) | 73, 196 |
| BmgBI | CACGTC | 2 cut(s) | 124, 166 |
| BmgT120I | GGNCC | 2 cut(s) | 73, 196 |
| BsaHI | GRCGYC | 1 cut(s) | 51 |
| BsaJI | CCNNGG | 2 cut(s) | 76, 199 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 15, 27, 45, 57, 138, 150, 168, 180 |
| BseDI | CCNNGG | 2 cut(s) | 76, 199 |
| BseRI | GAGGAG | 2 cut(s) | 39, 162 |
| Bsh1236I | CGCG | 1 cut(s) | 107 |
| BsmAI | GTCTC | 2 cut(s) | 21, 144 |
| BsmBI | CGTCTC | 2 cut(s) | 21, 144 |
| Bsp143I | GATC | 1 cut(s) | 109 |
| BspACI | CCGC | 1 cut(s) | 107 |
| BspFNI | CGCG | 1 cut(s) | 107 |
| BspMI | ACCTGC | 2 cut(s) | 8, 131 |
| BspPI | GGATC | 1 cut(s) | 117 |
| BssECI | CCNNGG | 2 cut(s) | 76, 199 |
| BssMI | GATC | 1 cut(s) | 109 |
| BssNI | GRCGYC | 1 cut(s) | 51 |
| BssT1I | CCWWGG | 2 cut(s) | 76, 199 |
| BstACI | GRCGYC | 1 cut(s) | 51 |
| BstFNI | CGCG | 1 cut(s) | 107 |
| BstH2I | RGCGCY | 1 cut(s) | 120 |
| BstHHI | GCGC | 1 cut(s) | 119 |
| BstKTI | GATC | 1 cut(s) | 112 |
| BstMAI | GTCTC | 2 cut(s) | 21, 144 |
| BstMBI | GATC | 1 cut(s) | 109 |
| BstUI | CGCG | 1 cut(s) | 107 |
| BstX2I | RGATCY | 1 cut(s) | 109 |
| BstYI | RGATCY | 1 cut(s) | 109 |
| BtrI | CACGTC | 2 cut(s) | 124, 166 |
| BveI | ACCTGC | 2 cut(s) | 8, 131 |
| CfoI | GCGC | 1 cut(s) | 119 |
| Cfr13I | GGNCC | 2 cut(s) | 73, 196 |
| CseI | GACGC | 2 cut(s) | 40, 163 |
| DpnI | GATC | 1 cut(s) | 111 |
| DpnII | GATC | 1 cut(s) | 109 |
| Eco130I | CCWWGG | 2 cut(s) | 76, 199 |
| Eco47I | GGWCC | 2 cut(s) | 73, 196 |
| EcoO109I | RGGNCCY | 2 cut(s) | 73, 196 |
| EcoT14I | CCWWGG | 2 cut(s) | 76, 199 |
| ErhI | CCWWGG | 2 cut(s) | 76, 199 |
| Esp3I | CGTCTC | 2 cut(s) | 21, 144 |
| FaiI | YATR | 1 cut(s) | 89 |
| FspBI | CTAG | 2 cut(s) | 77, 200 |
| GlaI | GCGC | 1 cut(s) | 118 |
| HaeII | RGCGCY | 1 cut(s) | 120 |
| HgaI | GACGC | 2 cut(s) | 40, 163 |
| HhaI | GCGC | 1 cut(s) | 119 |
| Hin1I | GRCGYC | 1 cut(s) | 51 |
| Hin6I | GCGC | 1 cut(s) | 117 |
| HinP1I | GCGC | 1 cut(s) | 117 |
| Hpy188I | TCNGA | 2 cut(s) | 56, 179 |
| Hpy99I | CGWCG | 2 cut(s) | 56, 179 |
| HpyCH4IV | ACGT | 4 cut(s) | 30, 123, 153, 165 |
| HpySE526I | ACGT | 4 cut(s) | 30, 123, 153, 165 |
| Hsp92I | GRCGYC | 1 cut(s) | 51 |
| HspAI | GCGC | 1 cut(s) | 117 |
| Kzo9I | GATC | 1 cut(s) | 109 |
| LpnPI | CCDG | 2 cut(s) | 3, 126 |
| MaeI | CTAG | 2 cut(s) | 77, 200 |
| MaeII | ACGT | 4 cut(s) | 30, 123, 153, 165 |
| MalI | GATC | 1 cut(s) | 111 |
| MboI | GATC | 1 cut(s) | 109 |
| MflI | RGATCY | 1 cut(s) | 109 |
| MmeI | TCCRAC | 4 cut(s) | 13, 34, 136, 157 |
| MvnI | CGCG | 1 cut(s) | 107 |
| NdeII | GATC | 1 cut(s) | 109 |
| PaqCI | CACCTGC | 2 cut(s) | 8, 131 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 60, 129, 171 |
| PflFI | GACNNNGTC | 3 cut(s) | 65, 125, 167 |
| PpuMI | RGGWCCY | 2 cut(s) | 73, 196 |
| Psp5II | RGGWCCY | 2 cut(s) | 73, 196 |
| PspPI | GGNCC | 2 cut(s) | 73, 196 |
| PspPPI | RGGWCCY | 2 cut(s) | 73, 196 |
| PsuI | RGATCY | 1 cut(s) | 109 |
| PsyI | GACNNNGTC | 3 cut(s) | 65, 125, 167 |
| Sau3AI | GATC | 1 cut(s) | 109 |
| Sau96I | GGNCC | 2 cut(s) | 73, 196 |
| SinI | GGWCC | 2 cut(s) | 73, 196 |
| SsiI | CCGC | 1 cut(s) | 107 |
| SspMI | CTAG | 2 cut(s) | 77, 200 |
| StyI | CCWWGG | 2 cut(s) | 76, 199 |
| TaiI | ACGT | 4 cut(s) | 33, 126, 156, 168 |
| TaqI | TCGA | 2 cut(s) | 69, 192 |
| Tth111I | GACNNNGTC | 3 cut(s) | 65, 125, 167 |
| VpaK11BI | GGWCC | 2 cut(s) | 73, 196 |
| XmaJI | CCTAGG | 2 cut(s) | 76, 199 |
| XspI | CTAG | 2 cut(s) | 77, 200 |