Rh7CG470900

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0006912
Physical Location & Seq
Reverse (-)
63152698 .. 63152916
219 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG470900.1

Sequence Viewer

Length: 219 bp
ATGGAAAGCTACTTGCACCTCTCGCCGGAGGCCTCAAGCAATTGGAAGAAATTCGTCGGCCTCGTCGTCAAGAACCCCGCCAGAATGTTCCGACATGTCACCGATCTTGCTAAGCGAGATGAGGCTGAGAAGAAGAAGACGACGACGACATTGATTTTGCACCTTGTCGGAATTTCGATCAACGGCGTGGCGGCACAGCTTTTGCTTCTCGGCCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000325 GO:0001101 GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0006952 GO:0008150 GO:0008324 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009624 GO:0009628 GO:0009705 GO:0010035 GO:0010941 GO:0012505 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0031224 GO:0031226 GO:0034220 GO:0042221 GO:0042592 GO:0042623 GO:0042625 GO:0042626 GO:0042742 GO:0043067 GO:0043069 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046873 GO:0048519 GO:0048523 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055081 GO:0055085 GO:0060548 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098542 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:0099131 GO:0099132 GO:1901700
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CaATP_NAI Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

72

Amino Acids

8.04

Weight (kDa)

9.99

Isoelectric Point (pI)

27.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CaATP_NAI PF12515 8 - 41 5.2e-07 Ca2+-ATPase N terminal autoinhibitory domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 78, 191
AcoI YGGCCR 1 cut(s) 211
AcsI RAATTY 2 cut(s) 50, 171
AfiI CCNNNNNNNGG 1 cut(s) 25
AflIII ACRYGT 1 cut(s) 94
AluBI AGCT 2 cut(s) 9, 199
AluI AGCT 2 cut(s) 9, 199
AoxI GGCC 3 cut(s) 30, 58, 211
ApoI RAATTY 2 cut(s) 50, 171
ArsI GACNNNNNNTTYG 2 cut(s) 139, 171
Asp700I GAANNNNTTC 1 cut(s) 50
AsuHPI GGTGA 1 cut(s) 91
BbsI GAAGAC 1 cut(s) 143
BceAI ACGGC 2 cut(s) 198, 199
BisI GCNGC 1 cut(s) 192
BlpI GCTNAGC 1 cut(s) 111
BlsI GCNGC 1 cut(s) 193
BpiI GAAGAC 1 cut(s) 143
Bpu1102I GCTNAGC 1 cut(s) 111
BpuEI CTTGAG 1 cut(s) 19
Bsc4I CCNNNNNNNGG 1 cut(s) 25
BseLI CCNNNNNNNGG 1 cut(s) 25
BseMII CTCAG 1 cut(s) 117
BseX3I CGGCCG 1 cut(s) 211
Bsh1285I CGRYCG 1 cut(s) 214
BshFI GGCC 3 cut(s) 32, 60, 213
BsiEI CGRYCG 1 cut(s) 214
BsiSI CCGG 1 cut(s) 26
BslI CCNNNNNNNGG 1 cut(s) 25
BsnI GGCC 3 cut(s) 32, 60, 213
Bsp143I GATC 2 cut(s) 103, 177
Bsp1720I GCTNAGC 1 cut(s) 111
BspACI CCGC 2 cut(s) 78, 191
BspANI GGCC 3 cut(s) 32, 60, 213
BspCNI CTCAG 1 cut(s) 118
BssMI GATC 2 cut(s) 103, 177
BstDEI CTNAG 2 cut(s) 111, 126
BstKTI GATC 2 cut(s) 106, 180
BstMBI GATC 2 cut(s) 103, 177
BstMCI CGRYCG 1 cut(s) 214
BstMWI GCNNNNNNNGC 1 cut(s) 22
BstNSI RCATGY 1 cut(s) 98
BstV2I GAAGAC 1 cut(s) 143
BstZI CGGCCG 1 cut(s) 211
BsuRI GGCC 3 cut(s) 32, 60, 213
CviAII CATG 1 cut(s) 95
CviJI RGCY 6 cut(s) 9, 32, 60, 125, 199, 213
CviKI_1 RGCY 6 cut(s) 9, 32, 60, 125, 199, 213
DdeI CTNAG 2 cut(s) 111, 126
DpnI GATC 2 cut(s) 105, 179
DpnII GATC 2 cut(s) 103, 177
EaeI YGGCCR 1 cut(s) 211
EagI CGGCCG 1 cut(s) 211
EclXI CGGCCG 1 cut(s) 211
Eco147I AGGCCT 1 cut(s) 32
Eco52I CGGCCG 1 cut(s) 211
FaeI CATG 1 cut(s) 98
FaiI YATR 1 cut(s) 96
FatI CATG 1 cut(s) 94
FauI CCCGC 1 cut(s) 85
Fnu4HI GCNGC 1 cut(s) 192
Fsp4HI GCNGC 1 cut(s) 192
GluI GCNGC 1 cut(s) 192
HaeIII GGCC 3 cut(s) 32, 60, 213
HapII CCGG 1 cut(s) 26
Hin1II CATG 1 cut(s) 98
HpaII CCGG 1 cut(s) 26
HphI GGTGA 1 cut(s) 91
Hpy188I TCNGA 2 cut(s) 92, 170
Hpy188III TCNNGA 1 cut(s) 70
Hpy99I CGWCG 4 cut(s) 59, 68, 145, 148
HpyCH4V TGCA 2 cut(s) 16, 160
HpyF10VI GCNNNNNNNGC 1 cut(s) 22
HpyF3I CTNAG 2 cut(s) 111, 126
Hsp92II CATG 1 cut(s) 98
Kzo9I GATC 2 cut(s) 103, 177
LpnPI CCDG 2 cut(s) 39, 94
MaeIII GTNAC 1 cut(s) 97
MalI GATC 2 cut(s) 105, 179
MboI GATC 2 cut(s) 103, 177
MboII GAAGA 4 cut(s) 58, 142, 145, 148
MfeI CAATTG 1 cut(s) 40
MluCI AATT 3 cut(s) 40, 50, 171
MmeI TCCRAC 2 cut(s) 115, 148
MnlI CCTC 5 cut(s) 22, 29, 43, 71, 115
MroXI GAANNNNTTC 1 cut(s) 50
MspI CCGG 1 cut(s) 26
MunI CAATTG 1 cut(s) 40
MwoI GCNNNNNNNGC 1 cut(s) 22
NdeII GATC 2 cut(s) 103, 177
NlaIII CATG 1 cut(s) 98
NmeAIII GCCGAG 1 cut(s) 189
NmuCI GTSAC 1 cut(s) 97
NspI RCATGY 1 cut(s) 98
PceI AGGCCT 1 cut(s) 32
PciI ACATGT 1 cut(s) 94
PcsI WCGNNNNNNNCGW 2 cut(s) 60, 63
PdmI GAANNNNTTC 1 cut(s) 50
PkrI GCNGC 1 cut(s) 193
PscI ACATGT 1 cut(s) 94
SatI GCNGC 1 cut(s) 192
Sau3AI GATC 2 cut(s) 103, 177
SetI ASST 4 cut(s) 11, 21, 165, 201
SmlI CTYRAG 1 cut(s) 34
SmoI CTYRAG 1 cut(s) 34
Sse9I AATT 3 cut(s) 40, 50, 171
SseBI AGGCCT 1 cut(s) 32
SsiI CCGC 2 cut(s) 78, 191
StuI AGGCCT 1 cut(s) 32
TaqI TCGA 1 cut(s) 176
TasI AATT 3 cut(s) 40, 50, 171
TauI GCSGC 1 cut(s) 194
TseFI GTSAC 1 cut(s) 97
Tsp45I GTSAC 1 cut(s) 97
XapI RAATTY 2 cut(s) 50, 171
XceI RCATGY 1 cut(s) 98
XmnI GAANNNNTTC 1 cut(s) 50
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.