Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g23940 FvH4_1g23941 |
| malus_domestica | MD11G1095500.v1.1 |
| prunus_persica | Prupe.6G071000_v2.0.a1 |
| pyrus_communis | pycom11g08090 |
| rosa_chinensis | RchiOBHm_Chr2g0119991 RchiOBHm_Chr3g0477321 |
| rosa_laevigata | RLG00000018506 RLG00000018509 RLG00000018742 |
| rosa_multiflora | Rmu_sc0000657.1_g000021 Rmu_sc0006369.1_g000001 Rmu_sc0006369.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00103950 Rroxscaffold_2G00123790 Rroxscaffold_2G00123880 Rroxscaffold_2G00123910 Rroxscaffold_5G00352290 Rroxscaffold_5G00352300 |
| rosa_samantha | Rh2AG282900 Rh2BG294100 Rh3DG236700 |
| rosa_wichuraiana | Rw2G022590 Rw2G022610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 28 |
| AccB1I | GGYRCC | 1 cut(s) | 110 |
| AciI | CCGC | 1 cut(s) | 108 |
| AcsI | RAATTY | 1 cut(s) | 172 |
| AfaI | GTAC | 1 cut(s) | 285 |
| AgsI | TTSAA | 1 cut(s) | 93 |
| AjnI | CCWGG | 1 cut(s) | 167 |
| Alw26I | GTCTC | 2 cut(s) | 169, 209 |
| ApoI | RAATTY | 1 cut(s) | 172 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 208, 240 |
| AspLEI | GCGC | 1 cut(s) | 29 |
| AsuHPI | GGTGA | 1 cut(s) | 74 |
| BanI | GGYRCC | 1 cut(s) | 110 |
| BccI | CCATC | 1 cut(s) | 122 |
| BciT130I | CCWGG | 1 cut(s) | 169 |
| BcoDI | GTCTC | 2 cut(s) | 169, 209 |
| BfmI | CTRYAG | 1 cut(s) | 296 |
| Bme1390I | CCNGG | 1 cut(s) | 169 |
| BmiI | GGNNCC | 1 cut(s) | 112 |
| BmrFI | CCNGG | 1 cut(s) | 169 |
| BmrI | ACTGGG | 1 cut(s) | 28 |
| BmsI | GCATC | 2 cut(s) | 95, 112 |
| BmuI | ACTGGG | 1 cut(s) | 28 |
| BsaI | GGTCTC | 1 cut(s) | 169 |
| BsaJI | CCNNGG | 1 cut(s) | 10 |
| Bse1I | ACTGG | 1 cut(s) | 23 |
| Bse3DI | GCAATG | 1 cut(s) | 58 |
| BseBI | CCWGG | 1 cut(s) | 169 |
| BseDI | CCNNGG | 1 cut(s) | 10 |
| BseGI | GGATG | 1 cut(s) | 114 |
| BseMI | GCAATG | 1 cut(s) | 58 |
| BseMII | CTCAG | 1 cut(s) | 66 |
| BseNI | ACTGG | 1 cut(s) | 23 |
| BshNI | GGYRCC | 1 cut(s) | 110 |
| BsmAI | GTCTC | 2 cut(s) | 169, 209 |
| Bso31I | GGTCTC | 1 cut(s) | 169 |
| Bsp19I | CCATGG | 1 cut(s) | 10 |
| BspACI | CCGC | 1 cut(s) | 108 |
| BspCNI | CTCAG | 1 cut(s) | 67 |
| BspLI | GGNNCC | 1 cut(s) | 112 |
| BspT107I | GGYRCC | 1 cut(s) | 110 |
| BspTNI | GGTCTC | 1 cut(s) | 169 |
| BsrDI | GCAATG | 1 cut(s) | 58 |
| BsrI | ACTGG | 1 cut(s) | 23 |
| BssECI | CCNNGG | 1 cut(s) | 10 |
| BssT1I | CCWWGG | 1 cut(s) | 10 |
| Bst2UI | CCWGG | 1 cut(s) | 169 |
| Bst4CI | ACNGT | 2 cut(s) | 40, 220 |
| BstDEI | CTNAG | 1 cut(s) | 75 |
| BstDSI | CCRYGG | 1 cut(s) | 10 |
| BstF5I | GGATG | 1 cut(s) | 114 |
| BstHHI | GCGC | 1 cut(s) | 29 |
| BstMAI | GTCTC | 2 cut(s) | 169, 209 |
| BstNI | CCWGG | 1 cut(s) | 169 |
| BstSCI | CCNGG | 1 cut(s) | 167 |
| BstSFI | CTRYAG | 1 cut(s) | 296 |
| BtgI | CCRYGG | 1 cut(s) | 10 |
| BtsCI | GGATG | 1 cut(s) | 114 |
| CfoI | GCGC | 1 cut(s) | 29 |
| Csp6I | GTAC | 1 cut(s) | 284 |
| CviAII | CATG | 5 cut(s) | 11, 98, 119, 155, 200 |
| CviJI | RGCY | 1 cut(s) | 85 |
| CviKI_1 | RGCY | 1 cut(s) | 85 |
| CviQI | GTAC | 1 cut(s) | 284 |
| DdeI | CTNAG | 1 cut(s) | 75 |
| Eco130I | CCWWGG | 1 cut(s) | 10 |
| Eco31I | GGTCTC | 1 cut(s) | 169 |
| EcoRI | GAATTC | 1 cut(s) | 172 |
| EcoRII | CCWGG | 1 cut(s) | 167 |
| EcoT14I | CCWWGG | 1 cut(s) | 10 |
| EcoT22I | ATGCAT | 1 cut(s) | 99 |
| ErhI | CCWWGG | 1 cut(s) | 10 |
| FaeI | CATG | 5 cut(s) | 14, 101, 122, 158, 203 |
| FaiI | YATR | 6 cut(s) | 12, 99, 120, 156, 192, 201 |
| FatI | CATG | 5 cut(s) | 10, 97, 118, 154, 199 |
| FokI | GGATG | 1 cut(s) | 101 |
| FspI | TGCGCA | 1 cut(s) | 28 |
| GlaI | GCGC | 1 cut(s) | 28 |
| HhaI | GCGC | 1 cut(s) | 29 |
| Hin1II | CATG | 5 cut(s) | 14, 101, 122, 158, 203 |
| Hin6I | GCGC | 1 cut(s) | 27 |
| HinP1I | GCGC | 1 cut(s) | 27 |
| HphI | GGTGA | 1 cut(s) | 74 |
| Hpy166II | GTNNAC | 2 cut(s) | 36, 138 |
| Hpy188III | TCNNGA | 1 cut(s) | 277 |
| Hpy8I | GTNNAC | 2 cut(s) | 36, 138 |
| HpyAV | CCTTC | 2 cut(s) | 205, 283 |
| HpyCH4III | ACNGT | 2 cut(s) | 40, 220 |
| HpyCH4V | TGCA | 3 cut(s) | 97, 125, 194 |
| HpyF3I | CTNAG | 1 cut(s) | 75 |
| Hsp92II | CATG | 5 cut(s) | 14, 101, 122, 158, 203 |
| HspAI | GCGC | 1 cut(s) | 27 |
| LpnPI | CCDG | 5 cut(s) | 4, 154, 171, 181, 290 |
| LweI | GCATC | 2 cut(s) | 95, 112 |
| MaeIII | GTNAC | 1 cut(s) | 14 |
| MboII | GAAGA | 2 cut(s) | 114, 255 |
| MluCI | AATT | 1 cut(s) | 172 |
| MnlI | CCTC | 1 cut(s) | 244 |
| Mph1103I | ATGCAT | 1 cut(s) | 99 |
| MspR9I | CCNGG | 1 cut(s) | 169 |
| MvaI | CCWGG | 1 cut(s) | 169 |
| NcoI | CCATGG | 1 cut(s) | 10 |
| NlaIII | CATG | 5 cut(s) | 14, 101, 122, 158, 203 |
| NlaIV | GGNNCC | 1 cut(s) | 112 |
| NsbI | TGCGCA | 1 cut(s) | 28 |
| NsiI | ATGCAT | 1 cut(s) | 99 |
| PfoI | TCCNGGA | 1 cut(s) | 167 |
| Psp6I | CCWGG | 1 cut(s) | 167 |
| PspGI | CCWGG | 1 cut(s) | 167 |
| PspN4I | GGNNCC | 1 cut(s) | 112 |
| RsaI | GTAC | 1 cut(s) | 285 |
| RsaNI | GTAC | 1 cut(s) | 284 |
| ScrFI | CCNGG | 1 cut(s) | 169 |
| SetI | ASST | 4 cut(s) | 190, 255, 275, 293 |
| SfaNI | GCATC | 2 cut(s) | 95, 112 |
| SfcI | CTRYAG | 1 cut(s) | 296 |
| Sse9I | AATT | 1 cut(s) | 172 |
| SsiI | CCGC | 1 cut(s) | 108 |
| StyD4I | CCNGG | 1 cut(s) | 167 |
| StyI | CCWWGG | 1 cut(s) | 10 |
| TaaI | ACNGT | 2 cut(s) | 40, 220 |
| TasI | AATT | 1 cut(s) | 172 |
| TatI | WGTACW | 1 cut(s) | 283 |
| TspDTI | ATGAA | 1 cut(s) | 161 |
| XapI | RAATTY | 1 cut(s) | 172 |
| Zsp2I | ATGCAT | 1 cut(s) | 99 |