Rw2G022610

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0008107
Physical Location & Seq
Reverse (-)
32385207 .. 32387422
2216 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G022610.1

Sequence Viewer

Length: 1773 bp
ATGAACATGACAATGACCCAGAAGCTATCAAAACTAGTTGGTTTGGACCTCTTGTCTGGGTCTTCACCAACCCCTCAAAACCTCACCAAAATCATATCTTTCTGCGCAAAATCGGCTTCTTTCGATGTGGGTAGCGCCATTCACGCCATTGTTATCAAGTTGGGTTTTTGTTCGAATGTCTATATATGCAGTGCTCTCGTCGACGTGTACGGCAAATGTGGCGAGTCGTGGAATGCCCAGAAGGTGTTCGACGAAACGCCTCACAGAAATGTAGTGACTTGGAACTCTTTGATTTTTGGTTATTTGCAAGCTGGTTCGCCACTGAGAGCAACTCGTTTGTTTCTGGACATGTTAAGGGTCGGAACAGAGCCGCCGACGACGTTCAGCTTTTCGGGGGTGTTGGTGTGTTGCGCACAGTTAGAAGCTGAAGAGCTTGGAGCTCAGGTGCACGGTTTGAGCTTGAAAATGGGGATTTGTGATGATGTTGTGGTGGGAACAGGATTGATAGATATGTATTCAAAGTGTTGTAAGGTCAGAGAGTCATGGCGGGTGTTTAATCAAATGCGAGACAAGAATGTTGTGACATGGACTTCCATGGTTACTGGGTGTGCACAGAGTGGGCAGTCTGATGAGGCAATGACTTTAGTGAGAGAAATGCTGAGGTTGGGTCTCAAGCCTAATTATGTCACTTATAATAGTTTGTTGAGTTCATTTGCTAGAATGGACTTTTGGGATTGTTGCAGGCAAATCCATTCCCGGATAGTGAAAGAAGGGTTTGATTCCAACGTGTATATTGTGGTTACCCTTTTGACCTTATATTCAGAGTCTAATAGTAGCTTGGAGGACTTCCGTGCGCTTTGCTCATGTGTTTCAGTGTGGGATCAAATCTCATGGAATGCAGTAATTGCGGGTTTTTGTAATATTGGGAGCAGTGAGGAAGCTCTGAAGTGTTTCTCTGAAATGAGGCAGGCCGGTGTTGCTGTGGATTTTTTCACATTTACAAGCATTTTAAGAGCAGCAGGAACTCTTTCAGCACTTGTAGAGGGAAAGAAAATCCATGCTCTCATCTTCAAGAGTGGACATGCTTCAAATTTATGTGTTCAAAATGGGCTTGTTTCAATGTATGGAAGATGCGGTGCCATCCATGATGCAAAGTGGGTGTTTACTTTGATGAAAGAACATGATGTGGTCTCCTGGAATTCATTATTATCAGGTTATGCACATCATGGATTTGGGAAGGAAACTGTTGAATTGTTTGAGCAAATGAGAAGAACAGAGGTCAAACCAAATAATACCACCTTCCTGATTGTACTAACTGCCTGTAGCCATGTTGGTTTGTTGGACAAAGGGCTCGAGTATTTCAATCTAATGAGAAATTATGATTTGCCTGAACCACCCAAGGTGGAGCATTACGCTACCGTTGTTGATCTTTTTGGTCGGGCTGGAAACCTTCACGAAGCGGAAGCCTTCGTCAATAGCATGCCCATAGAGCCAGGTGTCTCAGTATACAAAGCTCTACTTAGTGCGTGCCAAGTTCATGGAAACAGAGAACTTGCTCTTCGTTCTGCAACAAAGCTTCAACAACTGTGCCCAAATGATCCTGCAACTTACATACTGCTATCAAATGTCTTGTTGACAAGAGGCTCCTGGGATGATGCAGCAGAAGTACGGAAGCACATGTATGATAGAGGAATAAGAATAACTCCTGGTTATAGTTGGATACATTCAACATTACAATATGAAGAAAAGGTGGATACAACTTTTAAGATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 Pkinase_Tyr

Protein Analysis

590

Amino Acids

65.58

Weight (kDa)

6.6

Isoelectric Point (pI)

27.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 89 - 138 6.2e-07 PPR repeat family
PPR_long PF17177 178 - 270 8.8e-07 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 191 - 240 5.9e-13 PPR repeat family
PPR_3 PF13812 192 - 238 5.9e-08 Pentatricopeptide repeat domain
PPR PF01535 194 - 224 1.2e-07 PPR repeat
PPR_2 PF13041 294 - 339 3.5e-11 PPR repeat family
PPR PF01535 296 - 326 3.6e-07 PPR repeat
PPR_2 PF13041 395 - 442 8.2e-12 PPR repeat family
PPR PF01535 397 - 424 2e-06 PPR repeat
E_motif PF20431 513 - 574 3.2e-12 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 693
Acc16I TGCGCA 2 cut(s) 106, 412
AccB1I GGYRCC 1 cut(s) 1136
AccI GTMKAC 2 cut(s) 201, 1506
AciI CCGC 5 cut(s) 371, 547, 908, 1134, 1460
AclWI GGATC 2 cut(s) 888, 1592
AcsI RAATTY 2 cut(s) 1090, 1198
AcuI CTGAAG 2 cut(s) 447, 965
AdeI CACNNNGTG 1 cut(s) 617
AfaI GTAC 3 cut(s) 209, 1311, 1668
AflIII ACRYGT 4 cut(s) 204, 348, 786, 1677
AhdI GACNNNNNGTC 1 cut(s) 52
AhlI ACTAGT 1 cut(s) 34
AjiI CACGTC 1 cut(s) 205
AjnI CCWGG 4 cut(s) 1193, 1492, 1646, 1705
AjuI GAANNNNNNNTTGG 2 cut(s) 712, 744
Alw21I GWGCWC 4 cut(s) 196, 442, 450, 613
Alw26I GTCTC 4 cut(s) 561, 674, 1195, 1504
Alw44I GTGCAC 2 cut(s) 446, 609
AlwI GGATC 2 cut(s) 888, 1592
Ama87I CYCGRG 1 cut(s) 1352
AoxI GGCC 1 cut(s) 969
ApaLI GTGCAC 2 cut(s) 446, 609
ApeKI GCWGC 2 cut(s) 1016, 1658
ApoI RAATTY 2 cut(s) 1090, 1198
Asp700I GAANNNNTTC 3 cut(s) 245, 950, 1027
AspLEI GCGC 4 cut(s) 107, 137, 413, 856
AspS9I GGNCC 1 cut(s) 46
AsuC2I CCSGG 1 cut(s) 757
AsuHPI GGTGA 2 cut(s) 57, 76
AsuII TTCGAA 1 cut(s) 173
AvaI CYCGRG 1 cut(s) 1352
AvaII GGWCC 1 cut(s) 46
BaeGI GKGCMC 3 cut(s) 450, 613, 1592
BanI GGYRCC 1 cut(s) 1136
BanII GRGCYC 2 cut(s) 442, 1353
BbsI GAAGAC 1 cut(s) 54
Bbv12I GWGCWC 4 cut(s) 196, 442, 450, 613
BbvCI CCTCAGC 1 cut(s) 659
BbvI GCAGC 2 cut(s) 1028, 1670
BccI CCATC 1 cut(s) 1148
BceAI ACGGC 1 cut(s) 226
BcgI CGANNNNNNTGC 2 cut(s) 178, 212
BciT130I CCWGG 4 cut(s) 1195, 1494, 1648, 1707
BciVI GTATCC 2 cut(s) 1713, 1747
BcnI CCSGG 1 cut(s) 757
BcoDI GTCTC 4 cut(s) 561, 674, 1195, 1504
BcuI ACTAGT 1 cut(s) 34
BfaI CTAG 2 cut(s) 35, 717
BfmI CTRYAG 1 cut(s) 1321
BfoI RGCGCY 1 cut(s) 138
BfuI GTATCC 2 cut(s) 1713, 1747
BisI GCNGC 3 cut(s) 371, 1017, 1659
BlsI GCNGC 3 cut(s) 372, 1018, 1660
Bme1390I CCNGG 5 cut(s) 757, 1195, 1494, 1648, 1707
Bme18I GGWCC 1 cut(s) 46
BmeRI GACNNNNNGTC 1 cut(s) 52
BmeT110I CYCGRG 1 cut(s) 1352
BmgBI CACGTC 1 cut(s) 205
BmgT120I GGNCC 1 cut(s) 46
BmiI GGNNCC 2 cut(s) 1138, 1645
BmrFI CCNGG 5 cut(s) 757, 1195, 1494, 1648, 1707
BmrI ACTGGG 1 cut(s) 612
BmsI GCATC 3 cut(s) 1121, 1138, 1645
BmuI ACTGGG 1 cut(s) 612
BpiI GAAGAC 1 cut(s) 54
BplI GAGNNNNNCTC 2 cut(s) 316, 348
Bpu10I CCTNAGC 2 cut(s) 441, 659
Bpu14I TTCGAA 1 cut(s) 173
BpuEI CTTGAG 1 cut(s) 656
BpuMI CCSGG 1 cut(s) 757
BsaI GGTCTC 2 cut(s) 674, 1195
BsaJI CCNNGG 3 cut(s) 594, 1398, 1647
BsaXI ACNNNNNCTCC 2 cut(s) 429, 459
Bse118I RCCGGY 1 cut(s) 971
Bse1I ACTGG 1 cut(s) 607
Bse3DI GCAATG 1 cut(s) 642
BseBI CCWGG 4 cut(s) 1195, 1494, 1648, 1707
BseDI CCNNGG 3 cut(s) 594, 1398, 1647
BseGI GGATG 2 cut(s) 1140, 1657
BseMI GCAATG 1 cut(s) 642
BseMII CTCAG 4 cut(s) 314, 455, 650, 1515
BseNI ACTGG 1 cut(s) 607
BseSI GKGCMC 3 cut(s) 450, 613, 1592
BseXI GCAGC 2 cut(s) 1028, 1670
BshFI GGCC 1 cut(s) 971
BshNI GGYRCC 1 cut(s) 1136
BsiHKAI GWGCWC 4 cut(s) 196, 442, 450, 613
BsiHKCI CYCGRG 1 cut(s) 1352
BsiSI CCGG 2 cut(s) 757, 972
BsmAI GTCTC 4 cut(s) 561, 674, 1195, 1504
BsmI GAATGC 2 cut(s) 238, 901
BsnI GGCC 1 cut(s) 971
Bso31I GGTCTC 2 cut(s) 674, 1195
BsoBI CYCGRG 1 cut(s) 1352
Bsp119I TTCGAA 1 cut(s) 173
Bsp1286I GDGCHC 6 cut(s) 196, 442, 450, 613, 1353, 1592
Bsp143I GATC 3 cut(s) 880, 1426, 1597
Bsp19I CCATGG 1 cut(s) 594
BspACI CCGC 5 cut(s) 371, 547, 908, 1134, 1460
BspANI GGCC 1 cut(s) 971
BspCNI CTCAG 4 cut(s) 315, 454, 651, 1514
BspLI GGNNCC 2 cut(s) 1138, 1645
BspPI GGATC 2 cut(s) 888, 1592
BspQI GCTCTTC 2 cut(s) 423, 1563
BspT104I TTCGAA 1 cut(s) 173
BspT107I GGYRCC 1 cut(s) 1136
BspTNI GGTCTC 2 cut(s) 674, 1195
BsrDI GCAATG 1 cut(s) 642
BsrFI RCCGGY 1 cut(s) 971
BsrI ACTGG 1 cut(s) 607
BssAI RCCGGY 1 cut(s) 971
BssECI CCNNGG 3 cut(s) 594, 1398, 1647
BssMI GATC 3 cut(s) 880, 1426, 1597
BssNAI GTATAC 1 cut(s) 1507
BssT1I CCWWGG 2 cut(s) 594, 1398
Bst1107I GTATAC 1 cut(s) 1507
Bst2UI CCWGG 4 cut(s) 1195, 1494, 1648, 1707
Bst4CI ACNGT 5 cut(s) 417, 452, 1246, 1420, 1587
Bst6I CTCTTC 2 cut(s) 423, 1563
BstAPI GCANNNNNTGC 1 cut(s) 905
BstBI TTCGAA 1 cut(s) 173
BstC8I GCNNGC 5 cut(s) 309, 743, 969, 1481, 1528
BstDEI CTNAG 5 cut(s) 323, 441, 659, 1501, 1520
BstDSI CCRYGG 1 cut(s) 594
BstEII GGTNACC 1 cut(s) 799
BstF5I GGATG 2 cut(s) 1140, 1657
BstH2I RGCGCY 1 cut(s) 138
BstHHI GCGC 4 cut(s) 107, 137, 413, 856
BstKTI GATC 3 cut(s) 883, 1429, 1600
BstMAI GTCTC 4 cut(s) 561, 674, 1195, 1504
BstMBI GATC 3 cut(s) 880, 1426, 1597
BstMWI GCNNNNNNNGC 6 cut(s) 113, 143, 219, 905, 977, 1489
BstNI CCWGG 4 cut(s) 1195, 1494, 1648, 1707
BstNSI RCATGY 4 cut(s) 352, 1085, 1483, 1681
BstPI GGTNACC 1 cut(s) 799
BstSCI CCNGG 5 cut(s) 755, 1193, 1492, 1646, 1705
BstSFI CTRYAG 1 cut(s) 1321
BstSLI GKGCMC 3 cut(s) 450, 613, 1592
BstV1I GCAGC 2 cut(s) 1028, 1670
BstV2I GAAGAC 1 cut(s) 54
BstXI CCANNNNNNTGG 1 cut(s) 1538
BstZ17I GTATAC 1 cut(s) 1507
BsuI GTATCC 2 cut(s) 1713, 1747
BsuRI GGCC 1 cut(s) 971
BtgI CCRYGG 1 cut(s) 594
BtrI CACGTC 1 cut(s) 205
BtsCI GGATG 2 cut(s) 1140, 1657
BtsI GCAGTG 2 cut(s) 196, 937
BtsIMutI CAGTG 4 cut(s) 196, 320, 879, 937
Cac8I GCNNGC 5 cut(s) 309, 743, 969, 1481, 1528
CfoI GCGC 4 cut(s) 107, 137, 413, 856
Cfr10I RCCGGY 1 cut(s) 971
Cfr13I GGNCC 1 cut(s) 46
Csp6I GTAC 3 cut(s) 208, 1310, 1667
CviQI GTAC 3 cut(s) 208, 1310, 1667
DdeI CTNAG 5 cut(s) 323, 441, 659, 1501, 1520
DpnI GATC 3 cut(s) 882, 1428, 1599
DpnII GATC 3 cut(s) 880, 1426, 1597
DraIII CACNNNGTG 1 cut(s) 617
DriI GACNNNNNGTC 1 cut(s) 52
Eam1104I CTCTTC 2 cut(s) 423, 1563
Eam1105I GACNNNNNGTC 1 cut(s) 52
EarI CTCTTC 2 cut(s) 423, 1563
Ecl136II GAGCTC 1 cut(s) 440
Eco130I CCWWGG 2 cut(s) 594, 1398
Eco24I GRGCYC 2 cut(s) 442, 1353
Eco31I GGTCTC 2 cut(s) 674, 1195
Eco47I GGWCC 1 cut(s) 46
Eco53kI GAGCTC 1 cut(s) 440
Eco57I CTGAAG 2 cut(s) 447, 965
Eco88I CYCGRG 1 cut(s) 1352
Eco91I GGTNACC 1 cut(s) 799
EcoICRI GAGCTC 1 cut(s) 440
EcoO65I GGTNACC 1 cut(s) 799
EcoRI GAATTC 1 cut(s) 1198
EcoRII CCWGG 4 cut(s) 1193, 1492, 1646, 1705
EcoT14I CCWWGG 2 cut(s) 594, 1398
EcoT38I GRGCYC 2 cut(s) 442, 1353
ErhI CCWWGG 2 cut(s) 594, 1398
FalI AAGNNNNNCTT 2 cut(s) 1503, 1535
FauI CCCGC 2 cut(s) 540, 901
FblI GTMKAC 2 cut(s) 201, 1506
Fnu4HI GCNGC 3 cut(s) 371, 1017, 1659
FokI GGATG 2 cut(s) 1127, 1664
FriOI GRGCYC 2 cut(s) 442, 1353
Fsp4HI GCNGC 3 cut(s) 371, 1017, 1659
FspBI CTAG 2 cut(s) 35, 717
FspI TGCGCA 2 cut(s) 106, 412
GlaI GCGC 4 cut(s) 106, 136, 412, 855
GluI GCNGC 3 cut(s) 371, 1017, 1659
HaeII RGCGCY 1 cut(s) 138
HaeIII GGCC 1 cut(s) 971
HapII CCGG 2 cut(s) 757, 972
HhaI GCGC 4 cut(s) 107, 137, 413, 856
Hin6I GCGC 4 cut(s) 105, 135, 411, 854
HinP1I GCGC 4 cut(s) 105, 135, 411, 854
HincII GTYRAC 2 cut(s) 202, 1635
HindII GTYRAC 2 cut(s) 202, 1635
HindIII AAGCTT 1 cut(s) 1574
HinfI GANTC 4 cut(s) 224, 539, 779, 824
HpaII CCGG 2 cut(s) 757, 972
HphI GGTGA 2 cut(s) 57, 76
Hpy166II GTNNAC 8 cut(s) 202, 208, 448, 611, 1079, 1164, 1507, 1635
Hpy188I TCNGA 6 cut(s) 362, 536, 628, 823, 945, 958
Hpy188III TCNNGA 4 cut(s) 344, 1072, 1303, 1454
Hpy8I GTNNAC 8 cut(s) 202, 208, 448, 611, 1079, 1164, 1507, 1635
Hpy99I CGWCG 5 cut(s) 203, 206, 254, 379, 382
HpyAV CCTTC 6 cut(s) 235, 764, 1231, 1309, 1460, 1477
HpyCH4III ACNGT 5 cut(s) 417, 452, 1246, 1420, 1587
HpyCH4IV ACGT 3 cut(s) 204, 380, 786
HpyF10VI GCNNNNNNNGC 6 cut(s) 113, 143, 219, 905, 977, 1489
HpyF3I CTNAG 5 cut(s) 323, 441, 659, 1501, 1520
HpySE526I ACGT 3 cut(s) 204, 380, 786
HspAI GCGC 4 cut(s) 105, 135, 411, 854
Kzo9I GATC 3 cut(s) 880, 1426, 1597
LguI GCTCTTC 2 cut(s) 423, 1563
LmnI GCTCC 4 cut(s) 437, 927, 1405, 1649
Lsp1109I GCAGC 2 cut(s) 1028, 1670
LweI GCATC 3 cut(s) 1121, 1138, 1645
MaeI CTAG 2 cut(s) 35, 717
MaeII ACGT 3 cut(s) 204, 380, 786
MaeIII GTNAC 5 cut(s) 274, 580, 598, 685, 799
MalI GATC 3 cut(s) 882, 1428, 1599
MboI GATC 3 cut(s) 880, 1426, 1597
MboII GAAGA 7 cut(s) 54, 440, 1060, 1140, 1281, 1550, 1754
MhlI GDGCHC 6 cut(s) 196, 442, 450, 613, 1353, 1592
MluCI AATT 6 cut(s) 679, 903, 1090, 1198, 1250, 1375
MlyI GAGTC 3 cut(s) 233, 548, 833
MmeI TCCRAC 4 cut(s) 340, 807, 1320, 1697
MroXI GAANNNNTTC 3 cut(s) 245, 950, 1027
MseI TTAA 4 cut(s) 353, 555, 1010, 1764
MslI CAYNNNNRTG 3 cut(s) 11, 267, 1680
MspI CCGG 2 cut(s) 757, 972
MspR9I CCNGG 5 cut(s) 757, 1195, 1494, 1648, 1707
Mva1269I GAATGC 2 cut(s) 238, 901
MvaI CCWGG 4 cut(s) 1195, 1494, 1648, 1707
MwoI GCNNNNNNNGC 6 cut(s) 113, 143, 219, 905, 977, 1489
NciI CCSGG 1 cut(s) 757
NcoI CCATGG 1 cut(s) 594
NdeII GATC 3 cut(s) 880, 1426, 1597
NlaIV GGNNCC 2 cut(s) 1138, 1645
NmuCI GTSAC 3 cut(s) 274, 580, 685
NsbI TGCGCA 2 cut(s) 106, 412
NspI RCATGY 4 cut(s) 352, 1085, 1483, 1681
NspV TTCGAA 1 cut(s) 173
PaeI GCATGC 1 cut(s) 1483
PaeR7I CTCGAG 1 cut(s) 1352
PciI ACATGT 2 cut(s) 348, 1677
PciSI GCTCTTC 2 cut(s) 423, 1563
PctI GAATGC 2 cut(s) 238, 901
PdmI GAANNNNTTC 3 cut(s) 245, 950, 1027
PfeI GAWTC 1 cut(s) 779
PfoI TCCNGGA 2 cut(s) 755, 1193
PkrI GCNGC 3 cut(s) 372, 1018, 1660
PleI GAGTC 3 cut(s) 232, 547, 832
PpsI GAGTC 3 cut(s) 232, 547, 832
PscI ACATGT 2 cut(s) 348, 1677
PsiI TTATAA 1 cut(s) 693
Psp124BI GAGCTC 1 cut(s) 442
Psp6I CCWGG 4 cut(s) 1193, 1492, 1646, 1705
PspEI GGTNACC 1 cut(s) 799
PspGI CCWGG 4 cut(s) 1193, 1492, 1646, 1705
PspN4I GGNNCC 2 cut(s) 1138, 1645
PspPI GGNCC 1 cut(s) 46
PspXI VCTCGAGB 1 cut(s) 1352
RsaI GTAC 3 cut(s) 209, 1311, 1668
RsaNI GTAC 3 cut(s) 208, 1310, 1667
RseI CAYNNNNRTG 3 cut(s) 11, 267, 1680
SacI GAGCTC 1 cut(s) 442
SalI GTCGAC 1 cut(s) 200
SapI GCTCTTC 2 cut(s) 423, 1563
SaqAI TTAA 4 cut(s) 353, 555, 1010, 1764
SatI GCNGC 3 cut(s) 371, 1017, 1659
Sau3AI GATC 3 cut(s) 880, 1426, 1597
Sau96I GGNCC 1 cut(s) 46
SchI GAGTC 3 cut(s) 233, 548, 833
ScrFI CCNGG 5 cut(s) 757, 1195, 1494, 1648, 1707
SduI GDGCHC 6 cut(s) 196, 442, 450, 613, 1353, 1592
SfaNI GCATC 3 cut(s) 1121, 1138, 1645
SfcI CTRYAG 1 cut(s) 1321
Sfr274I CTCGAG 1 cut(s) 1352
SfuI TTCGAA 1 cut(s) 173
SgrDI CGTCGACG 1 cut(s) 200
SinI GGWCC 1 cut(s) 46
SlaI CTCGAG 1 cut(s) 1352
SmiMI CAYNNNNRTG 3 cut(s) 11, 267, 1680
SmlI CTYRAG 2 cut(s) 671, 1352
SmoI CTYRAG 2 cut(s) 671, 1352
SpeI ACTAGT 1 cut(s) 34
SphI GCATGC 1 cut(s) 1483
Sse9I AATT 6 cut(s) 679, 903, 1090, 1198, 1250, 1375
SsiI CCGC 5 cut(s) 371, 547, 908, 1134, 1460
SspI AATATT 1 cut(s) 922
SspMI CTAG 2 cut(s) 35, 717
SstI GAGCTC 1 cut(s) 442
StyD4I CCNGG 5 cut(s) 755, 1193, 1492, 1646, 1705
StyI CCWWGG 2 cut(s) 594, 1398
TaaI ACNGT 5 cut(s) 417, 452, 1246, 1420, 1587
TaiI ACGT 3 cut(s) 207, 383, 789
TaqI TCGA 5 cut(s) 123, 173, 201, 249, 1353
TasI AATT 6 cut(s) 679, 903, 1090, 1198, 1250, 1375
TatI WGTACW 1 cut(s) 1309
TauI GCSGC 1 cut(s) 373
TfiI GAWTC 1 cut(s) 779
Tru1I TTAA 4 cut(s) 353, 555, 1010, 1764
Tru9I TTAA 4 cut(s) 353, 555, 1010, 1764
TscAI CASTG 4 cut(s) 196, 327, 879, 937
TseFI GTSAC 3 cut(s) 274, 580, 685
TseI GCWGC 2 cut(s) 1016, 1658
Tsp45I GTSAC 3 cut(s) 274, 580, 685
TspDTI ATGAA 6 cut(s) 17, 699, 1187, 1191, 1526, 1755
TspGWI ACGGA 2 cut(s) 839, 1684
TspRI CASTG 4 cut(s) 196, 327, 879, 937
VneI GTGCAC 2 cut(s) 446, 609
VpaK11BI GGWCC 1 cut(s) 46
XapI RAATTY 2 cut(s) 1090, 1198
XceI RCATGY 4 cut(s) 352, 1085, 1483, 1681
XhoI CTCGAG 1 cut(s) 1352
XmiI GTMKAC 2 cut(s) 201, 1506
XmnI GAANNNNTTC 3 cut(s) 245, 950, 1027
XspI CTAG 2 cut(s) 35, 717
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.