Rroxscaffold_2G00155170

Leucine aminopeptidase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
91578082 .. 91582287
4206 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00155170.1

Sequence Viewer

Length: 1410 bp
ATGGTGGCCAGTGTCGTGTCATTGGCTTCTTCCTTTATCGCATTCACTTCATCTTCTTCACCTTCATTTTCTTCTTCGTTTTTAACCAAACTAAGGCACGCGCCGAGTCTACGACTTTGTTTTGCAGTTTCGCCCTTGAGAGTGAAGAAGCACATGGCTCACACTATCGCTCGCGCCACTCTCGGCCTCACTCAGATTTCTCCGGCCTTTGAAGCCCCTAAGCTCACTTTGGCGACGAAAGAGATTGATGTAACGGAATGGAAAGGGGACCTGCTTGCGGTTGGTGTTACAGAGAAGGACTTGGCGAAAGATCAGAACTCGAAATTCGAAAATCCGATTTTGAAGAAGCTGGATTCCTGTTTGGGTGGGGTGTTGGCTGAGGTCTCGACTGAGGAGGACTTCACAGGAAAGTCTGGCCAGTCTACGGTTGTTAGGCTTCCTGGTCTTGGCTCGAAGAGGGTTGGCTTGTTTGGGCTTGGACAATCTGCTTCGTCTACAGAAGCTTTTAAGGGTCTTGGGGAGGCGGCAGCAGCAGCGGCAAAGACTGCTCAAGCAAGTGATATTGCTATTGTGCTTGCTTCCTCGGAGGGGCTTTCTGCGAAATCTTGCACAGCTTCTGCAATAGCATCTGGAGCTGTTTTGGGGATATATGAAGACAACAGGTATAAATCTGAGTCAAAAAAACCAGCTCTCAAGTCTGTGGACATTCTTGGTCTTGGAACTGGACCTGAACTAGAGAAGAAGCTCAAATATGCTCAAGATGTTGCTGCTGGAATAATACTTGGGAAAGAGCTCGTGAATTCACCTGCCAATGTTCTCACACCTGGGAAACTAGCAGAAGAGGCCTCAAATATTGCTTCCTTATACAGTGATGTTCTTTCTGCAAAGATATTGAATGAAGAGCAATGCAAAGATCTGAAAATGGGTTCCTATTTGGCTGTGGCTGCAGCCTCAGCAAATCCTCCACATTTTATTCACTTGACCTACAAACCCCCTAGTGGACCTGCTAAGCTTAAATTAGCATTGGTGGGTAAAGGTCTGACTTTTGACAGTGGTGGCTACAACATCAAGACAGGACCTGGCTGTATAATTGAGCTTATGAAGTTTGATATGGGAGGTTCAGCTGCTGTATTAGGTGCAGCAAAAGCCATTGGTCAAATCAAACCTTCTGGTGTAGAGGTTCATTTCATTGTCGCAGCTTGTGAGAATATGATTAGTGGAACAGGTATGAGGCCTGGAGACATTGTCACAGCTTCCAATGGAAAGACCATTGAGGTCAATAACACAGATGCTGAAGGCAGACTGACTTTGGCAGATGCATTGGTATATGCTTGTAATCAAGGTGTTGACAAGGTGTCTTCACACCCAGCGATGACCTCGCGAAGGAGGTATTTGCAGCTTGGGAGATAA

Protein Analysis

469

Amino Acids

48.75

Weight (kDa)

8.94

Isoelectric Point (pI)

39.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M17_N PF02789 93 - 225 1.2e-26 Cytosol aminopeptidase family, N-terminal domain
Peptidase_M17 PF00883 262 - 459 5.7e-68 Cytosol aminopeptidase family, catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 814
Acc36I ACCTGC 3 cut(s) 279, 814, 1012
AccI GTMKAC 3 cut(s) 109, 422, 494
AccII CGCG 3 cut(s) 101, 174, 1381
AciI CCGC 3 cut(s) 278, 524, 536
AcoI YGGCCR 2 cut(s) 6, 415
AcsI RAATTY 2 cut(s) 323, 799
AcuI CTGAAG 1 cut(s) 1314
AfiI CCNNNNNNNGG 7 cut(s) 93, 277, 424, 446, 588, 998, 1383
AgsI TTSAA 3 cut(s) 212, 343, 895
AhdI GACNNNNNGTC 1 cut(s) 1354
AjnI CCWGG 4 cut(s) 439, 823, 1078, 1234
Alw21I GWGCWC 1 cut(s) 795
Alw26I GTCTC 2 cut(s) 388, 1233
AlwNI CAGNNNCTG 4 cut(s) 617, 1079, 1127, 1292
AoxI GGCC 6 cut(s) 6, 184, 204, 415, 843, 1232
ApoI RAATTY 2 cut(s) 323, 799
AspLEI GCGC 2 cut(s) 103, 176
AspS9I GGNCC 4 cut(s) 268, 725, 1001, 1076
AsuHPI GGTGA 2 cut(s) 51, 795
AsuII TTCGAA 1 cut(s) 327
AvaII GGWCC 4 cut(s) 268, 725, 1001, 1076
BalI TGGCCA 2 cut(s) 8, 417
BanII GRGCYC 1 cut(s) 795
BauI CACGAG 1 cut(s) 794
BbsI GAAGAC 2 cut(s) 660, 1350
Bbv12I GWGCWC 1 cut(s) 795
BbvCI CCTCAGC 2 cut(s) 378, 952
BbvI GCAGC 9 cut(s) 539, 542, 545, 754, 931, 959, 1111, 1151, 1208
BciT130I CCWGG 4 cut(s) 441, 825, 1080, 1236
BcoDI GTCTC 2 cut(s) 388, 1233
BfaI CTAG 3 cut(s) 734, 833, 996
BfmI CTRYAG 2 cut(s) 495, 945
BfuAI ACCTGC 3 cut(s) 279, 814, 1012
BglII AGATCT 1 cut(s) 913
BlpI GCTNAGC 1 cut(s) 1008
Bme1390I CCNGG 4 cut(s) 441, 825, 1080, 1236
Bme18I GGWCC 4 cut(s) 268, 725, 1001, 1076
BmeRI GACNNNNNGTC 1 cut(s) 1354
BmgT120I GGNCC 4 cut(s) 268, 725, 1001, 1076
BmiI GGNNCC 2 cut(s) 269, 928
BmrFI CCNGG 4 cut(s) 441, 825, 1080, 1236
BmsI GCATC 3 cut(s) 635, 1279, 1306
BpiI GAAGAC 2 cut(s) 660, 1350
BpmI CTGGAG 2 cut(s) 651, 1257
Bpu10I CCTNAGC 3 cut(s) 219, 378, 952
Bpu1102I GCTNAGC 1 cut(s) 1008
Bpu14I TTCGAA 1 cut(s) 327
BpuEI CTTGAG 4 cut(s) 157, 534, 677, 741
BsaI GGTCTC 1 cut(s) 388
BsaJI CCNNGG 2 cut(s) 582, 824
BsaXI ACNNNNNCTCC 2 cut(s) 1230, 1260
Bsc4I CCNNNNNNNGG 7 cut(s) 93, 277, 424, 446, 588, 998, 1383
Bse1I ACTGG 3 cut(s) 9, 418, 727
Bse3DI GCAATG 1 cut(s) 911
BseBI CCWGG 4 cut(s) 441, 825, 1080, 1236
BseDI CCNNGG 2 cut(s) 582, 824
BseLI CCNNNNNNNGG 7 cut(s) 93, 277, 424, 446, 588, 998, 1383
BseMI GCAATG 1 cut(s) 911
BseMII CTCAG 5 cut(s) 206, 369, 381, 663, 966
BseNI ACTGG 3 cut(s) 9, 418, 727
BseRI GAGGAG 1 cut(s) 407
BseXI GCAGC 9 cut(s) 539, 542, 545, 754, 931, 959, 1111, 1151, 1208
BseYI CCCAGC 1 cut(s) 1366
BsgI GTGCAG 1 cut(s) 1158
Bsh1236I CGCG 3 cut(s) 101, 174, 1381
BshFI GGCC 6 cut(s) 8, 186, 206, 417, 845, 1234
BsiHKAI GWGCWC 1 cut(s) 795
BsiSI CCGG 1 cut(s) 203
BslFI GGGAC 1 cut(s) 281
BslI CCNNNNNNNGG 7 cut(s) 93, 277, 424, 446, 588, 998, 1383
BsmAI GTCTC 2 cut(s) 388, 1233
BsmFI GGGAC 1 cut(s) 281
BsmI GAATGC 1 cut(s) 41
BsnI GGCC 6 cut(s) 8, 186, 206, 417, 845, 1234
Bso31I GGTCTC 1 cut(s) 388
Bsp119I TTCGAA 1 cut(s) 327
Bsp1286I GDGCHC 1 cut(s) 795
Bsp143I GATC 2 cut(s) 310, 913
Bsp1720I GCTNAGC 1 cut(s) 1008
Bsp68I TCGCGA 1 cut(s) 1381
BspACI CCGC 3 cut(s) 278, 524, 536
BspANI GGCC 6 cut(s) 8, 186, 206, 417, 845, 1234
BspCNI CTCAG 5 cut(s) 205, 370, 382, 664, 965
BspFNI CGCG 3 cut(s) 101, 174, 1381
BspLI GGNNCC 2 cut(s) 269, 928
BspMAI CTGCAG 1 cut(s) 949
BspMI ACCTGC 3 cut(s) 279, 814, 1012
BspQI GCTCTTC 1 cut(s) 894
BspT104I TTCGAA 1 cut(s) 327
BspTNI GGTCTC 1 cut(s) 388
BsrDI GCAATG 1 cut(s) 911
BsrI ACTGG 3 cut(s) 9, 418, 727
BssECI CCNNGG 2 cut(s) 582, 824
BssMI GATC 2 cut(s) 310, 913
BssSI CACGAG 1 cut(s) 794
Bst2BI CACGAG 1 cut(s) 794
Bst2UI CCWGG 4 cut(s) 441, 825, 1080, 1236
Bst4CI ACNGT 3 cut(s) 427, 869, 1052
Bst6I CTCTTC 3 cut(s) 449, 834, 894
BstAPI GCANNNNNTGC 1 cut(s) 545
BstBI TTCGAA 1 cut(s) 327
BstC8I GCNNGC 4 cut(s) 99, 172, 276, 576
BstDEI CTNAG 8 cut(s) 92, 192, 219, 378, 390, 672, 952, 1008
BstENI CCTNNNNNAGG 1 cut(s) 1381
BstFNI CGCG 3 cut(s) 101, 174, 1381
BstHHI GCGC 2 cut(s) 103, 176
BstKTI GATC 2 cut(s) 313, 916
BstMAI GTCTC 2 cut(s) 388, 1233
BstMBI GATC 2 cut(s) 310, 913
BstNI CCWGG 4 cut(s) 441, 825, 1080, 1236
BstSCI CCNGG 4 cut(s) 439, 823, 1078, 1234
BstSFI CTRYAG 2 cut(s) 495, 945
BstUI CGCG 3 cut(s) 101, 174, 1381
BstV1I GCAGC 9 cut(s) 539, 542, 545, 754, 931, 959, 1111, 1151, 1208
BstV2I GAAGAC 2 cut(s) 660, 1350
BstX2I RGATCY 1 cut(s) 913
BstYI RGATCY 1 cut(s) 913
BsuRI GGCC 6 cut(s) 8, 186, 206, 417, 845, 1234
BtgZI GCGATG 1 cut(s) 1385
BtsIMutI CAGTG 3 cut(s) 16, 874, 1057
BtuMI TCGCGA 1 cut(s) 1381
BveI ACCTGC 3 cut(s) 279, 814, 1012
Cac8I GCNNGC 4 cut(s) 99, 172, 276, 576
CaiI CAGNNNCTG 4 cut(s) 617, 1079, 1127, 1292
CfoI GCGC 2 cut(s) 103, 176
Cfr13I GGNCC 4 cut(s) 268, 725, 1001, 1076
CviAII CATG 1 cut(s) 154
DdeI CTNAG 8 cut(s) 92, 192, 219, 378, 390, 672, 952, 1008
DpnI GATC 2 cut(s) 312, 915
DpnII GATC 2 cut(s) 310, 913
DriI GACNNNNNGTC 1 cut(s) 1354
EaeI YGGCCR 2 cut(s) 6, 415
Eam1104I CTCTTC 3 cut(s) 449, 834, 894
Eam1105I GACNNNNNGTC 1 cut(s) 1354
EarI CTCTTC 3 cut(s) 449, 834, 894
Ecl136II GAGCTC 1 cut(s) 793
Eco147I AGGCCT 2 cut(s) 845, 1234
Eco24I GRGCYC 1 cut(s) 795
Eco31I GGTCTC 1 cut(s) 388
Eco47I GGWCC 4 cut(s) 268, 725, 1001, 1076
Eco53kI GAGCTC 1 cut(s) 793
Eco57I CTGAAG 1 cut(s) 1314
EcoICRI GAGCTC 1 cut(s) 793
EcoNI CCTNNNNNAGG 1 cut(s) 1381
EcoO109I RGGNCCY 2 cut(s) 268, 1076
EcoRI GAATTC 1 cut(s) 799
EcoRII CCWGG 4 cut(s) 439, 823, 1078, 1234
EcoT22I ATGCAT 1 cut(s) 1321
EcoT38I GRGCYC 1 cut(s) 795
FaeI CATG 1 cut(s) 157
FaqI GGGAC 1 cut(s) 281
FatI CATG 1 cut(s) 153
FblI GTMKAC 3 cut(s) 109, 422, 494
FriOI GRGCYC 1 cut(s) 795
FspBI CTAG 3 cut(s) 734, 833, 996
GlaI GCGC 2 cut(s) 102, 175
GsaI CCCAGC 1 cut(s) 1370
GsuI CTGGAG 2 cut(s) 651, 1257
HaeIII GGCC 6 cut(s) 8, 186, 206, 417, 845, 1234
HapII CCGG 1 cut(s) 203
HhaI GCGC 2 cut(s) 103, 176
Hin1II CATG 1 cut(s) 157
Hin6I GCGC 2 cut(s) 101, 174
HinP1I GCGC 2 cut(s) 101, 174
HincII GTYRAC 1 cut(s) 1348
HindII GTYRAC 1 cut(s) 1348
HindIII AAGCTT 2 cut(s) 501, 1010
HinfI GANTC 3 cut(s) 106, 353, 674
HpaII CCGG 1 cut(s) 203
HphI GGTGA 2 cut(s) 51, 795
Hpy166II GTNNAC 6 cut(s) 110, 423, 495, 703, 1001, 1348
Hpy188I TCNGA 7 cut(s) 195, 315, 336, 586, 673, 918, 1041
Hpy188III TCNNGA 6 cut(s) 385, 630, 758, 796, 1069, 1380
Hpy8I GTNNAC 6 cut(s) 110, 423, 495, 703, 1001, 1348
Hpy99I CGWCG 1 cut(s) 238
HpyAV CCTTC 5 cut(s) 72, 289, 1176, 1289, 1377
HpyCH4III ACNGT 3 cut(s) 427, 869, 1052
HpyCH4V TGCA 9 cut(s) 125, 609, 620, 884, 909, 947, 1139, 1319, 1396
HpyF3I CTNAG 8 cut(s) 92, 192, 219, 378, 390, 672, 952, 1008
Hsp92II CATG 1 cut(s) 157
HspAI GCGC 2 cut(s) 101, 174
Kzo9I GATC 2 cut(s) 310, 913
LguI GCTCTTC 1 cut(s) 894
LmnI GCTCC 1 cut(s) 632
Lsp1109I GCAGC 9 cut(s) 539, 542, 545, 754, 931, 959, 1111, 1151, 1208
LweI GCATC 3 cut(s) 635, 1279, 1306
MaeI CTAG 3 cut(s) 734, 833, 996
MaeIII GTNAC 3 cut(s) 250, 286, 1246
MalI GATC 2 cut(s) 312, 915
MboI GATC 2 cut(s) 310, 913
MflI RGATCY 1 cut(s) 913
MhlI GDGCHC 1 cut(s) 795
MlsI TGGCCA 2 cut(s) 8, 417
MluCI AATT 4 cut(s) 323, 799, 1016, 1089
MluNI TGGCCA 2 cut(s) 8, 417
MlyI GAGTC 2 cut(s) 115, 683
Mox20I TGGCCA 2 cut(s) 8, 417
Mph1103I ATGCAT 1 cut(s) 1321
MscI TGGCCA 2 cut(s) 8, 417
MseI TTAA 3 cut(s) 83, 507, 1014
Msp20I TGGCCA 2 cut(s) 8, 417
MspA1I CMGCKG 2 cut(s) 536, 1124
MspI CCGG 1 cut(s) 203
MspR9I CCNGG 4 cut(s) 441, 825, 1080, 1236
Mva1269I GAATGC 1 cut(s) 41
MvaI CCWGG 4 cut(s) 441, 825, 1080, 1236
MvnI CGCG 3 cut(s) 101, 174, 1381
NdeII GATC 2 cut(s) 310, 913
NlaIII CATG 1 cut(s) 157
NlaIV GGNNCC 2 cut(s) 269, 928
NmeAIII GCCGAG 2 cut(s) 129, 162
NmuCI GTSAC 1 cut(s) 1246
NruI TCGCGA 1 cut(s) 1381
NsiI ATGCAT 1 cut(s) 1321
NspV TTCGAA 1 cut(s) 327
PaqCI CACCTGC 1 cut(s) 814
PceI AGGCCT 2 cut(s) 845, 1234
PciSI GCTCTTC 1 cut(s) 894
PctI GAATGC 1 cut(s) 41
PfeI GAWTC 1 cut(s) 353
PflFI GACNNNGTC 1 cut(s) 1244
PleI GAGTC 2 cut(s) 114, 682
PpsI GAGTC 2 cut(s) 114, 682
PpuMI RGGWCCY 2 cut(s) 268, 1076
Psp124BI GAGCTC 1 cut(s) 795
Psp5II RGGWCCY 2 cut(s) 268, 1076
Psp6I CCWGG 4 cut(s) 439, 823, 1078, 1234
PspFI CCCAGC 1 cut(s) 1366
PspGI CCWGG 4 cut(s) 439, 823, 1078, 1234
PspN4I GGNNCC 2 cut(s) 269, 928
PspPI GGNCC 4 cut(s) 268, 725, 1001, 1076
PspPPI RGGWCCY 2 cut(s) 268, 1076
PstI CTGCAG 1 cut(s) 949
PstNI CAGNNNCTG 4 cut(s) 617, 1079, 1127, 1292
PsuI RGATCY 1 cut(s) 913
PsyI GACNNNGTC 1 cut(s) 1244
PvuII CAGCTG 1 cut(s) 1124
RruI TCGCGA 1 cut(s) 1381
SacI GAGCTC 1 cut(s) 795
SapI GCTCTTC 1 cut(s) 894
SaqAI TTAA 3 cut(s) 83, 507, 1014
Sau3AI GATC 2 cut(s) 310, 913
Sau96I GGNCC 4 cut(s) 268, 725, 1001, 1076
SchI GAGTC 2 cut(s) 115, 683
ScrFI CCNGG 4 cut(s) 441, 825, 1080, 1236
SduI GDGCHC 1 cut(s) 795
SfaNI GCATC 3 cut(s) 635, 1279, 1306
SfcI CTRYAG 2 cut(s) 495, 945
SfuI TTCGAA 1 cut(s) 327
SinI GGWCC 4 cut(s) 268, 725, 1001, 1076
SmlI CTYRAG 4 cut(s) 136, 549, 692, 756
SmoI CTYRAG 4 cut(s) 136, 549, 692, 756
Sse9I AATT 4 cut(s) 323, 799, 1016, 1089
SseBI AGGCCT 2 cut(s) 845, 1234
SsiI CCGC 3 cut(s) 278, 524, 536
SspI AATATT 1 cut(s) 853
SspMI CTAG 3 cut(s) 734, 833, 996
SstI GAGCTC 1 cut(s) 795
StuI AGGCCT 2 cut(s) 845, 1234
StyD4I CCNGG 4 cut(s) 439, 823, 1078, 1234
TaaI ACNGT 3 cut(s) 427, 869, 1052
TaqI TCGA 4 cut(s) 320, 327, 386, 452
TasI AATT 4 cut(s) 323, 799, 1016, 1089
TauI GCSGC 2 cut(s) 527, 539
TfiI GAWTC 1 cut(s) 353
Tru1I TTAA 3 cut(s) 83, 507, 1014
Tru9I TTAA 3 cut(s) 83, 507, 1014
TscAI CASTG 3 cut(s) 16, 874, 1057
TseFI GTSAC 1 cut(s) 1246
Tsp45I GTSAC 1 cut(s) 1246
TspDTI ATGAA 7 cut(s) 39, 54, 666, 912, 1115, 1172, 1177
TspGWI ACGGA 1 cut(s) 269
TspRI CASTG 3 cut(s) 16, 874, 1057
Tth111I GACNNNGTC 1 cut(s) 1244
VpaK11BI GGWCC 4 cut(s) 268, 725, 1001, 1076
XagI CCTNNNNNAGG 1 cut(s) 1381
XapI RAATTY 2 cut(s) 323, 799
XmiI GTMKAC 3 cut(s) 109, 422, 494
XspI CTAG 3 cut(s) 734, 833, 996
Zsp2I ATGCAT 1 cut(s) 1321
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.