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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G10270 AT3G10270 AT5G04130 |
| fragaria_vesca | FvH4_6g25390 FvH4_6g25390 FvH4_6g25390 |
| malus_domestica | MD12G1095800.v1.1 MD14G1090600.v1.1 |
| prunus_persica | Prupe.7G033800_v2.0.a1 |
| pyrus_communis | pycom12g08270 |
| rosa_chinensis | RchiOBHm_Chr2g0125831 |
| rosa_laevigata | RLG00000018881 |
| rosa_multiflora | Rmu_co8103446.1_g000001 Rmu_sc0009079.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00117620 Rroxscaffold_2G00117680 Rroxscaffold_2G00125340 Rroxscaffold_2G00125370 Rroxscaffold_3G00238600 Rroxscaffold_4G00318520 Rroxscaffold_4G00324150 Rroxscaffold_5G00337460 |
| rosa_rugosa | Rorug02G0259400 |
| rosa_samantha | Rh2AG317700 Rh2BG326100 |
| rosa_wichuraiana | Rw2G025700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 266 |
| AciI | CCGC | 1 cut(s) | 332 |
| AcuI | CTGAAG | 1 cut(s) | 182 |
| AfaI | GTAC | 3 cut(s) | 48, 129, 170 |
| AgsI | TTSAA | 2 cut(s) | 125, 190 |
| AhlI | ACTAGT | 1 cut(s) | 227 |
| AjiI | CACGTC | 1 cut(s) | 104 |
| AluBI | AGCT | 4 cut(s) | 31, 202, 274, 278 |
| AluI | AGCT | 4 cut(s) | 31, 202, 274, 278 |
| Aor13HI | TCCGGA | 1 cut(s) | 266 |
| AoxI | GGCC | 2 cut(s) | 419, 469 |
| ApeKI | GCWGC | 2 cut(s) | 199, 207 |
| AsuC2I | CCSGG | 1 cut(s) | 473 |
| AsuHPI | GGTGA | 4 cut(s) | 323, 353, 364, 423 |
| AsuII | TTCGAA | 1 cut(s) | 461 |
| AsuNHI | GCTAGC | 1 cut(s) | 274 |
| BanII | GRGCYC | 1 cut(s) | 360 |
| BbvI | GCAGC | 2 cut(s) | 194, 211 |
| BccI | CCATC | 1 cut(s) | 332 |
| BclI | TGATCA | 1 cut(s) | 313 |
| BcnI | CCSGG | 1 cut(s) | 473 |
| BcuI | ACTAGT | 1 cut(s) | 227 |
| BfaI | CTAG | 3 cut(s) | 228, 275, 368 |
| BisI | GCNGC | 2 cut(s) | 200, 208 |
| BlsI | GCNGC | 2 cut(s) | 201, 209 |
| Bme1390I | CCNGG | 1 cut(s) | 473 |
| BmgBI | CACGTC | 1 cut(s) | 104 |
| BmrFI | CCNGG | 1 cut(s) | 473 |
| BmsI | GCATC | 1 cut(s) | 169 |
| BmtI | GCTAGC | 1 cut(s) | 278 |
| Bpu14I | TTCGAA | 1 cut(s) | 461 |
| BpuMI | CCSGG | 1 cut(s) | 473 |
| BsaWI | WCCGGW | 2 cut(s) | 59, 266 |
| BseAI | TCCGGA | 1 cut(s) | 266 |
| BseGI | GGATG | 2 cut(s) | 184, 481 |
| BseRI | GAGGAG | 1 cut(s) | 107 |
| BseXI | GCAGC | 2 cut(s) | 194, 211 |
| BshFI | GGCC | 2 cut(s) | 421, 471 |
| BsiSI | CCGG | 3 cut(s) | 60, 267, 472 |
| BsnI | GGCC | 2 cut(s) | 421, 471 |
| Bsp119I | TTCGAA | 1 cut(s) | 461 |
| Bsp1286I | GDGCHC | 1 cut(s) | 360 |
| Bsp13I | TCCGGA | 1 cut(s) | 266 |
| Bsp143I | GATC | 3 cut(s) | 313, 364, 385 |
| BspACI | CCGC | 1 cut(s) | 332 |
| BspANI | GGCC | 2 cut(s) | 421, 471 |
| BspEI | TCCGGA | 1 cut(s) | 266 |
| BspOI | GCTAGC | 1 cut(s) | 278 |
| BspT104I | TTCGAA | 1 cut(s) | 461 |
| BssMI | GATC | 3 cut(s) | 313, 364, 385 |
| Bst4CI | ACNGT | 1 cut(s) | 173 |
| Bst6I | CTCTTC | 3 cut(s) | 102, 107, 268 |
| BstBI | TTCGAA | 1 cut(s) | 461 |
| BstC8I | GCNNGC | 3 cut(s) | 276, 401, 449 |
| BstDEI | CTNAG | 1 cut(s) | 86 |
| BstEII | GGTNACC | 1 cut(s) | 55 |
| BstF5I | GGATG | 2 cut(s) | 184, 481 |
| BstKTI | GATC | 3 cut(s) | 316, 367, 388 |
| BstMBI | GATC | 3 cut(s) | 313, 364, 385 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 216 |
| BstPI | GGTNACC | 1 cut(s) | 55 |
| BstSCI | CCNGG | 1 cut(s) | 471 |
| BstV1I | GCAGC | 2 cut(s) | 194, 211 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 441 |
| BsuRI | GGCC | 2 cut(s) | 421, 471 |
| BtrI | CACGTC | 1 cut(s) | 104 |
| BtsCI | GGATG | 2 cut(s) | 184, 481 |
| Cac8I | GCNNGC | 3 cut(s) | 276, 401, 449 |
| Csp6I | GTAC | 3 cut(s) | 47, 128, 169 |
| CviJI | RGCY | 8 cut(s) | 31, 202, 207, 274, 278, 358, 421, 471 |
| CviKI_1 | RGCY | 8 cut(s) | 31, 202, 207, 274, 278, 358, 421, 471 |
| CviQI | GTAC | 3 cut(s) | 47, 128, 169 |
| DdeI | CTNAG | 1 cut(s) | 86 |
| DpnI | GATC | 3 cut(s) | 315, 366, 387 |
| DpnII | GATC | 3 cut(s) | 313, 364, 385 |
| Eam1104I | CTCTTC | 3 cut(s) | 102, 107, 268 |
| EarI | CTCTTC | 3 cut(s) | 102, 107, 268 |
| EciI | GGCGGA | 1 cut(s) | 347 |
| Eco24I | GRGCYC | 1 cut(s) | 360 |
| Eco57I | CTGAAG | 1 cut(s) | 182 |
| Eco91I | GGTNACC | 1 cut(s) | 55 |
| EcoO65I | GGTNACC | 1 cut(s) | 55 |
| EcoT38I | GRGCYC | 1 cut(s) | 360 |
| FaiI | YATR | 3 cut(s) | 143, 418, 425 |
| FbaI | TGATCA | 1 cut(s) | 313 |
| Fnu4HI | GCNGC | 2 cut(s) | 200, 208 |
| FokI | GGATG | 1 cut(s) | 191 |
| FriOI | GRGCYC | 1 cut(s) | 360 |
| Fsp4HI | GCNGC | 2 cut(s) | 200, 208 |
| FspBI | CTAG | 3 cut(s) | 228, 275, 368 |
| GluI | GCNGC | 2 cut(s) | 200, 208 |
| HaeIII | GGCC | 2 cut(s) | 421, 471 |
| HapII | CCGG | 3 cut(s) | 60, 267, 472 |
| HinfI | GANTC | 3 cut(s) | 305, 344, 428 |
| HpaII | CCGG | 3 cut(s) | 60, 267, 472 |
| HphI | GGTGA | 4 cut(s) | 323, 353, 364, 423 |
| Hpy188I | TCNGA | 1 cut(s) | 234 |
| Hpy188III | TCNNGA | 2 cut(s) | 267, 299 |
| HpyCH4III | ACNGT | 1 cut(s) | 173 |
| HpyCH4IV | ACGT | 1 cut(s) | 103 |
| HpyCH4V | TGCA | 1 cut(s) | 210 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 216 |
| HpyF3I | CTNAG | 1 cut(s) | 86 |
| HpySE526I | ACGT | 1 cut(s) | 103 |
| Kpn2I | TCCGGA | 1 cut(s) | 266 |
| Ksp22I | TGATCA | 1 cut(s) | 313 |
| Kzo9I | GATC | 3 cut(s) | 313, 364, 385 |
| LmnI | GCTCC | 1 cut(s) | 196 |
| LpnPI | CCDG | 5 cut(s) | 73, 280, 294, 385, 485 |
| Lsp1109I | GCAGC | 2 cut(s) | 194, 211 |
| LweI | GCATC | 1 cut(s) | 169 |
| MaeI | CTAG | 3 cut(s) | 228, 275, 368 |
| MaeII | ACGT | 1 cut(s) | 103 |
| MaeIII | GTNAC | 4 cut(s) | 55, 75, 370, 404 |
| MalI | GATC | 3 cut(s) | 315, 366, 387 |
| MboI | GATC | 3 cut(s) | 313, 364, 385 |
| MboII | GAAGA | 6 cut(s) | 119, 124, 175, 250, 255, 314 |
| MhlI | GDGCHC | 1 cut(s) | 360 |
| MluCI | AATT | 2 cut(s) | 134, 453 |
| MlyI | GAGTC | 1 cut(s) | 422 |
| MmeI | TCCRAC | 1 cut(s) | 212 |
| MnlI | CCTC | 4 cut(s) | 46, 85, 169, 208 |
| MroI | TCCGGA | 1 cut(s) | 266 |
| MslI | CAYNNNNRTG | 1 cut(s) | 439 |
| MspI | CCGG | 3 cut(s) | 60, 267, 472 |
| MspR9I | CCNGG | 1 cut(s) | 473 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 216 |
| NciI | CCSGG | 1 cut(s) | 473 |
| NdeII | GATC | 3 cut(s) | 313, 364, 385 |
| NheI | GCTAGC | 1 cut(s) | 274 |
| NmeAIII | GCCGAG | 1 cut(s) | 183 |
| NmuCI | GTSAC | 2 cut(s) | 370, 404 |
| NspV | TTCGAA | 1 cut(s) | 461 |
| PfeI | GAWTC | 2 cut(s) | 305, 344 |
| PkrI | GCNGC | 2 cut(s) | 201, 209 |
| PleI | GAGTC | 1 cut(s) | 422 |
| PpsI | GAGTC | 1 cut(s) | 422 |
| PspEI | GGTNACC | 1 cut(s) | 55 |
| RsaI | GTAC | 3 cut(s) | 48, 129, 170 |
| RsaNI | GTAC | 3 cut(s) | 47, 128, 169 |
| RseI | CAYNNNNRTG | 1 cut(s) | 439 |
| SatI | GCNGC | 2 cut(s) | 200, 208 |
| Sau3AI | GATC | 3 cut(s) | 313, 364, 385 |
| SchI | GAGTC | 1 cut(s) | 422 |
| ScrFI | CCNGG | 1 cut(s) | 473 |
| SduI | GDGCHC | 1 cut(s) | 360 |
| SetI | ASST | 7 cut(s) | 33, 57, 106, 204, 276, 280, 417 |
| SfaNI | GCATC | 1 cut(s) | 169 |
| SfuI | TTCGAA | 1 cut(s) | 461 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 439 |
| SpeI | ACTAGT | 1 cut(s) | 227 |
| Sse9I | AATT | 2 cut(s) | 134, 453 |
| SsiI | CCGC | 1 cut(s) | 332 |
| SspMI | CTAG | 3 cut(s) | 228, 275, 368 |
| StyD4I | CCNGG | 1 cut(s) | 471 |
| TaaI | ACNGT | 1 cut(s) | 173 |
| TaiI | ACGT | 1 cut(s) | 106 |
| TaqI | TCGA | 1 cut(s) | 461 |
| TasI | AATT | 2 cut(s) | 134, 453 |
| TatI | WGTACW | 2 cut(s) | 46, 127 |
| TfiI | GAWTC | 2 cut(s) | 305, 344 |
| TseFI | GTSAC | 2 cut(s) | 370, 404 |
| TseI | GCWGC | 2 cut(s) | 199, 207 |
| Tsp45I | GTSAC | 2 cut(s) | 370, 404 |
| TspDTI | ATGAA | 2 cut(s) | 17, 244 |
| XspI | CTAG | 3 cut(s) | 228, 275, 368 |