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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g06640 FvH4_3g06680 |
| pyrus_communis | pycom03g06710 |
| rosa_chinensis | RchiOBHm_Chr7g0185271 |
| rosa_laevigata | RLG00000030277 |
| rosa_multiflora | Rmu_sc0000605.1_g000028 |
| rosa_roxburghii | Rroxscaffold_1G00051070 Rroxscaffold_3G00258470 |
| rosa_rugosa | Rorug04G0137600 |
| rosa_samantha | Rh2AG225600 Rh2DG233000 Rh3AG021000 Rh3BG021700 Rh3CG020400 Rh3CG354000 Rh3DG021500 Rh3DG357300 Rh4BG176500 Rh5AG269200 Rh5CG324900 Rh5CG409200 Rh5CG475200 Rh6DG366200 Rh7AG075400 Rh7DG072600 |
| rosa_wichuraiana | Rw3G028160 Rw5G040880 Rw7G006040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 333 |
| AcoI | YGGCCR | 1 cut(s) | 48 |
| AcuI | CTGAAG | 2 cut(s) | 119, 327 |
| AfeI | AGCGCT | 1 cut(s) | 204 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 85, 244 |
| AflII | CTTAAG | 1 cut(s) | 188 |
| AjnI | CCWGG | 2 cut(s) | 237, 242 |
| AluBI | AGCT | 3 cut(s) | 155, 293, 368 |
| AluI | AGCT | 3 cut(s) | 155, 293, 368 |
| AlwI | GGATC | 1 cut(s) | 333 |
| Aor51HI | AGCGCT | 1 cut(s) | 204 |
| AoxI | GGCC | 2 cut(s) | 48, 240 |
| AspLEI | GCGC | 1 cut(s) | 205 |
| AsuHPI | GGTGA | 1 cut(s) | 187 |
| BalI | TGGCCA | 1 cut(s) | 50 |
| BccI | CCATC | 1 cut(s) | 270 |
| BciT130I | CCWGG | 2 cut(s) | 239, 244 |
| BfaI | CTAG | 1 cut(s) | 126 |
| BfoI | RGCGCY | 1 cut(s) | 206 |
| BfrI | CTTAAG | 1 cut(s) | 188 |
| Bme1390I | CCNGG | 2 cut(s) | 239, 244 |
| BmrFI | CCNGG | 2 cut(s) | 239, 244 |
| BmrI | ACTGGG | 1 cut(s) | 172 |
| BmuI | ACTGGG | 1 cut(s) | 172 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 98, 130 |
| BsaJI | CCNNGG | 2 cut(s) | 208, 243 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 85, 244 |
| Bse1I | ACTGG | 2 cut(s) | 167, 289 |
| BseBI | CCWGG | 2 cut(s) | 239, 244 |
| BseDI | CCNNGG | 2 cut(s) | 208, 243 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 85, 244 |
| BseNI | ACTGG | 2 cut(s) | 167, 289 |
| BshFI | GGCC | 2 cut(s) | 50, 242 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 85, 244 |
| BsnI | GGCC | 2 cut(s) | 50, 242 |
| Bsp143I | GATC | 1 cut(s) | 325 |
| BspANI | GGCC | 2 cut(s) | 50, 242 |
| BspPI | GGATC | 1 cut(s) | 333 |
| BspTI | CTTAAG | 1 cut(s) | 188 |
| BsrI | ACTGG | 2 cut(s) | 167, 289 |
| BssECI | CCNNGG | 2 cut(s) | 208, 243 |
| BssMI | GATC | 1 cut(s) | 325 |
| Bst2UI | CCWGG | 2 cut(s) | 239, 244 |
| Bst6I | CTCTTC | 1 cut(s) | 138 |
| BstAFI | CTTAAG | 1 cut(s) | 188 |
| BstC8I | GCNNGC | 1 cut(s) | 52 |
| BstDEI | CTNAG | 1 cut(s) | 217 |
| BstH2I | RGCGCY | 1 cut(s) | 206 |
| BstHHI | GCGC | 1 cut(s) | 205 |
| BstKTI | GATC | 1 cut(s) | 328 |
| BstMBI | GATC | 1 cut(s) | 325 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 365 |
| BstNI | CCWGG | 2 cut(s) | 239, 244 |
| BstSCI | CCNGG | 2 cut(s) | 237, 242 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 269 |
| BsuRI | GGCC | 2 cut(s) | 50, 242 |
| BtsIMutI | CAGTG | 1 cut(s) | 160 |
| Cac8I | GCNNGC | 1 cut(s) | 52 |
| CfoI | GCGC | 1 cut(s) | 205 |
| CviJI | RGCY | 8 cut(s) | 50, 100, 143, 155, 242, 273, 293, 368 |
| CviKI_1 | RGCY | 8 cut(s) | 50, 100, 143, 155, 242, 273, 293, 368 |
| DdeI | CTNAG | 1 cut(s) | 217 |
| DpnI | GATC | 1 cut(s) | 327 |
| DpnII | GATC | 1 cut(s) | 325 |
| EaeI | YGGCCR | 1 cut(s) | 48 |
| Eam1104I | CTCTTC | 1 cut(s) | 138 |
| EarI | CTCTTC | 1 cut(s) | 138 |
| Eco47III | AGCGCT | 1 cut(s) | 204 |
| Eco57I | CTGAAG | 2 cut(s) | 119, 327 |
| EcoRII | CCWGG | 2 cut(s) | 237, 242 |
| FaiI | YATR | 6 cut(s) | 146, 152, 267, 300, 376, 378 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 171, 203 |
| FspBI | CTAG | 1 cut(s) | 126 |
| GlaI | GCGC | 1 cut(s) | 204 |
| HaeII | RGCGCY | 1 cut(s) | 206 |
| HaeIII | GGCC | 2 cut(s) | 50, 242 |
| HhaI | GCGC | 1 cut(s) | 205 |
| Hin6I | GCGC | 1 cut(s) | 203 |
| HinP1I | GCGC | 1 cut(s) | 203 |
| HinfI | GANTC | 4 cut(s) | 74, 169, 213, 257 |
| HphI | GGTGA | 1 cut(s) | 187 |
| Hpy188I | TCNGA | 4 cut(s) | 40, 88, 209, 277 |
| Hpy188III | TCNNGA | 1 cut(s) | 137 |
| HpyCH4V | TGCA | 3 cut(s) | 29, 160, 335 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 365 |
| HpyF3I | CTNAG | 1 cut(s) | 217 |
| HspAI | GCGC | 1 cut(s) | 203 |
| Kzo9I | GATC | 1 cut(s) | 325 |
| LmnI | GCTCC | 1 cut(s) | 210 |
| MaeI | CTAG | 1 cut(s) | 126 |
| MaeIII | GTNAC | 1 cut(s) | 6 |
| MalI | GATC | 1 cut(s) | 327 |
| MboI | GATC | 1 cut(s) | 325 |
| MboII | GAAGA | 2 cut(s) | 75, 125 |
| MlsI | TGGCCA | 1 cut(s) | 50 |
| MluCI | AATT | 2 cut(s) | 69, 118 |
| MluNI | TGGCCA | 1 cut(s) | 50 |
| MlyI | GAGTC | 1 cut(s) | 251 |
| MnlI | CCTC | 5 cut(s) | 21, 100, 133, 203, 349 |
| Mox20I | TGGCCA | 1 cut(s) | 50 |
| MscI | TGGCCA | 1 cut(s) | 50 |
| MseI | TTAA | 2 cut(s) | 189, 227 |
| MslI | CAYNNNNRTG | 1 cut(s) | 267 |
| Msp20I | TGGCCA | 1 cut(s) | 50 |
| MspCI | CTTAAG | 1 cut(s) | 188 |
| MspR9I | CCNGG | 2 cut(s) | 239, 244 |
| MvaI | CCWGG | 2 cut(s) | 239, 244 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 365 |
| NdeII | GATC | 1 cut(s) | 325 |
| PfeI | GAWTC | 3 cut(s) | 74, 169, 213 |
| PleI | GAGTC | 1 cut(s) | 251 |
| PpsI | GAGTC | 1 cut(s) | 251 |
| Psp6I | CCWGG | 2 cut(s) | 237, 242 |
| PspGI | CCWGG | 2 cut(s) | 237, 242 |
| RseI | CAYNNNNRTG | 1 cut(s) | 267 |
| SaqAI | TTAA | 2 cut(s) | 189, 227 |
| Sau3AI | GATC | 1 cut(s) | 325 |
| SchI | GAGTC | 1 cut(s) | 251 |
| ScrFI | CCNGG | 2 cut(s) | 239, 244 |
| SetI | ASST | 6 cut(s) | 13, 157, 177, 295, 307, 370 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 267 |
| SmlI | CTYRAG | 1 cut(s) | 188 |
| SmoI | CTYRAG | 1 cut(s) | 188 |
| Sse9I | AATT | 2 cut(s) | 69, 118 |
| SspMI | CTAG | 1 cut(s) | 126 |
| StyD4I | CCNGG | 2 cut(s) | 237, 242 |
| TasI | AATT | 2 cut(s) | 69, 118 |
| TfiI | GAWTC | 3 cut(s) | 74, 169, 213 |
| Tru1I | TTAA | 2 cut(s) | 189, 227 |
| Tru9I | TTAA | 2 cut(s) | 189, 227 |
| TscAI | CASTG | 1 cut(s) | 167 |
| TspDTI | ATGAA | 1 cut(s) | 213 |
| TspRI | CASTG | 1 cut(s) | 167 |
| Vha464I | CTTAAG | 1 cut(s) | 188 |
| XspI | CTAG | 1 cut(s) | 126 |