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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g06640 FvH4_3g06680 |
| pyrus_communis | pycom03g06710 |
| rosa_chinensis | RchiOBHm_Chr7g0185271 |
| rosa_laevigata | RLG00000030277 |
| rosa_multiflora | Rmu_sc0000605.1_g000028 |
| rosa_roxburghii | Rroxscaffold_1G00051070 Rroxscaffold_3G00258470 |
| rosa_rugosa | Rorug04G0137600 |
| rosa_samantha | Rh2AG225600 Rh2DG233000 Rh3AG021000 Rh3BG021700 Rh3CG020400 Rh3CG354000 Rh3DG021500 Rh3DG357300 Rh4BG176500 Rh5AG269200 Rh5CG324900 Rh5CG409200 Rh5CG475200 Rh6DG366200 Rh7AG075400 Rh7DG072600 |
| rosa_wichuraiana | Rw3G028160 Rw5G040880 Rw7G006040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 139 |
| AclWI | GGATC | 1 cut(s) | 501 |
| AcoI | YGGCCR | 1 cut(s) | 48 |
| AcuI | CTGAAG | 2 cut(s) | 237, 495 |
| AfeI | AGCGCT | 1 cut(s) | 372 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 412 |
| AflII | CTTAAG | 1 cut(s) | 356 |
| AgsI | TTSAA | 1 cut(s) | 305 |
| AjnI | CCWGG | 3 cut(s) | 13, 405, 410 |
| AluBI | AGCT | 3 cut(s) | 148, 323, 461 |
| AluI | AGCT | 3 cut(s) | 148, 323, 461 |
| AlwI | GGATC | 1 cut(s) | 501 |
| Ama87I | CYCGRG | 1 cut(s) | 86 |
| Aor51HI | AGCGCT | 1 cut(s) | 372 |
| AoxI | GGCC | 2 cut(s) | 48, 408 |
| AspLEI | GCGC | 1 cut(s) | 373 |
| AsuHPI | GGTGA | 1 cut(s) | 355 |
| AvaI | CYCGRG | 1 cut(s) | 86 |
| BalI | TGGCCA | 1 cut(s) | 50 |
| BbsI | GAAGAC | 1 cut(s) | 78 |
| BccI | CCATC | 1 cut(s) | 438 |
| BciT130I | CCWGG | 3 cut(s) | 15, 407, 412 |
| BfaI | CTAG | 1 cut(s) | 294 |
| BfmI | CTRYAG | 1 cut(s) | 111 |
| BfoI | RGCGCY | 1 cut(s) | 374 |
| BfrI | CTTAAG | 1 cut(s) | 356 |
| Bme1390I | CCNGG | 3 cut(s) | 15, 407, 412 |
| BmeT110I | CYCGRG | 1 cut(s) | 86 |
| BmrFI | CCNGG | 3 cut(s) | 15, 407, 412 |
| BmrI | ACTGGG | 1 cut(s) | 340 |
| BmsI | GCATC | 1 cut(s) | 87 |
| BmuI | ACTGGG | 1 cut(s) | 340 |
| BpiI | GAAGAC | 1 cut(s) | 78 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 266, 298, 307, 339 |
| BsaJI | CCNNGG | 3 cut(s) | 13, 376, 411 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 412 |
| Bse1I | ACTGG | 2 cut(s) | 335, 457 |
| BseBI | CCWGG | 3 cut(s) | 15, 407, 412 |
| BseDI | CCNNGG | 3 cut(s) | 13, 376, 411 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 412 |
| BseNI | ACTGG | 2 cut(s) | 335, 457 |
| BsgI | GTGCAG | 1 cut(s) | 311 |
| BshFI | GGCC | 2 cut(s) | 50, 410 |
| BsiHKCI | CYCGRG | 1 cut(s) | 86 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 412 |
| BsnI | GGCC | 2 cut(s) | 50, 410 |
| BsoBI | CYCGRG | 1 cut(s) | 86 |
| Bsp143I | GATC | 1 cut(s) | 493 |
| BspANI | GGCC | 2 cut(s) | 50, 410 |
| BspPI | GGATC | 1 cut(s) | 501 |
| BspTI | CTTAAG | 1 cut(s) | 356 |
| BsrI | ACTGG | 2 cut(s) | 335, 457 |
| BssECI | CCNNGG | 3 cut(s) | 13, 376, 411 |
| BssMI | GATC | 1 cut(s) | 493 |
| Bst2UI | CCWGG | 3 cut(s) | 15, 407, 412 |
| Bst6I | CTCTTC | 1 cut(s) | 306 |
| BstAFI | CTTAAG | 1 cut(s) | 356 |
| BstDEI | CTNAG | 1 cut(s) | 385 |
| BstH2I | RGCGCY | 1 cut(s) | 374 |
| BstHHI | GCGC | 1 cut(s) | 373 |
| BstKTI | GATC | 1 cut(s) | 496 |
| BstMBI | GATC | 1 cut(s) | 493 |
| BstNI | CCWGG | 3 cut(s) | 15, 407, 412 |
| BstSCI | CCNGG | 3 cut(s) | 13, 405, 410 |
| BstSFI | CTRYAG | 1 cut(s) | 111 |
| BstV2I | GAAGAC | 1 cut(s) | 78 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 437 |
| BsuRI | GGCC | 2 cut(s) | 50, 410 |
| BtsIMutI | CAGTG | 1 cut(s) | 328 |
| CfoI | GCGC | 1 cut(s) | 373 |
| CviAII | CATG | 2 cut(s) | 101, 106 |
| CviJI | RGCY | 9 cut(s) | 50, 110, 148, 268, 311, 323, 410, 441, 461 |
| CviKI_1 | RGCY | 9 cut(s) | 50, 110, 148, 268, 311, 323, 410, 441, 461 |
| DdeI | CTNAG | 1 cut(s) | 385 |
| DpnI | GATC | 1 cut(s) | 495 |
| DpnII | GATC | 1 cut(s) | 493 |
| EaeI | YGGCCR | 1 cut(s) | 48 |
| Eam1104I | CTCTTC | 1 cut(s) | 306 |
| EarI | CTCTTC | 1 cut(s) | 306 |
| Eco47III | AGCGCT | 1 cut(s) | 372 |
| Eco57I | CTGAAG | 2 cut(s) | 237, 495 |
| Eco88I | CYCGRG | 1 cut(s) | 86 |
| EcoRII | CCWGG | 3 cut(s) | 13, 405, 410 |
| EcoT22I | ATGCAT | 1 cut(s) | 102 |
| FaeI | CATG | 2 cut(s) | 104, 109 |
| FaiI | YATR | 9 cut(s) | 102, 107, 193, 195, 197, 314, 320, 435, 468 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 339, 371 |
| FatI | CATG | 2 cut(s) | 100, 105 |
| FblI | GTMKAC | 1 cut(s) | 139 |
| FspBI | CTAG | 1 cut(s) | 294 |
| GlaI | GCGC | 1 cut(s) | 372 |
| HaeII | RGCGCY | 1 cut(s) | 374 |
| HaeIII | GGCC | 2 cut(s) | 50, 410 |
| HhaI | GCGC | 1 cut(s) | 373 |
| Hin1II | CATG | 2 cut(s) | 104, 109 |
| Hin6I | GCGC | 1 cut(s) | 371 |
| HinP1I | GCGC | 1 cut(s) | 371 |
| HindIII | AAGCTT | 1 cut(s) | 146 |
| HinfI | GANTC | 5 cut(s) | 160, 242, 337, 381, 425 |
| HphI | GGTGA | 1 cut(s) | 355 |
| Hpy166II | GTNNAC | 1 cut(s) | 140 |
| Hpy188I | TCNGA | 3 cut(s) | 40, 256, 377 |
| Hpy188III | TCNNGA | 2 cut(s) | 88, 305 |
| Hpy8I | GTNNAC | 1 cut(s) | 140 |
| HpyCH4V | TGCA | 4 cut(s) | 29, 100, 328, 503 |
| HpyF3I | CTNAG | 1 cut(s) | 385 |
| Hsp92II | CATG | 2 cut(s) | 104, 109 |
| HspAI | GCGC | 1 cut(s) | 371 |
| Kzo9I | GATC | 1 cut(s) | 493 |
| LmnI | GCTCC | 1 cut(s) | 378 |
| LpnPI | CCDG | 9 cut(s) | 27, 316, 326, 392, 397, 419, 424, 438, 486 |
| LweI | GCATC | 1 cut(s) | 87 |
| MaeI | CTAG | 1 cut(s) | 294 |
| MaeIII | GTNAC | 1 cut(s) | 6 |
| MalI | GATC | 1 cut(s) | 495 |
| MboI | GATC | 1 cut(s) | 493 |
| MboII | GAAGA | 3 cut(s) | 83, 243, 293 |
| MlsI | TGGCCA | 1 cut(s) | 50 |
| MluCI | AATT | 3 cut(s) | 125, 237, 286 |
| MluNI | TGGCCA | 1 cut(s) | 50 |
| MlyI | GAGTC | 1 cut(s) | 419 |
| MnlI | CCTC | 3 cut(s) | 268, 301, 371 |
| Mox20I | TGGCCA | 1 cut(s) | 50 |
| Mph1103I | ATGCAT | 1 cut(s) | 102 |
| MscI | TGGCCA | 1 cut(s) | 50 |
| MseI | TTAA | 3 cut(s) | 152, 357, 395 |
| MslI | CAYNNNNRTG | 1 cut(s) | 435 |
| Msp20I | TGGCCA | 1 cut(s) | 50 |
| MspCI | CTTAAG | 1 cut(s) | 356 |
| MspR9I | CCNGG | 3 cut(s) | 15, 407, 412 |
| MvaI | CCWGG | 3 cut(s) | 15, 407, 412 |
| NdeII | GATC | 1 cut(s) | 493 |
| NlaIII | CATG | 2 cut(s) | 104, 109 |
| NsiI | ATGCAT | 1 cut(s) | 102 |
| PaeR7I | CTCGAG | 1 cut(s) | 86 |
| PfeI | GAWTC | 4 cut(s) | 160, 242, 337, 381 |
| PleI | GAGTC | 1 cut(s) | 419 |
| PpsI | GAGTC | 1 cut(s) | 419 |
| Psp6I | CCWGG | 3 cut(s) | 13, 405, 410 |
| PspGI | CCWGG | 3 cut(s) | 13, 405, 410 |
| RseI | CAYNNNNRTG | 1 cut(s) | 435 |
| SaqAI | TTAA | 3 cut(s) | 152, 357, 395 |
| Sau3AI | GATC | 1 cut(s) | 493 |
| SchI | GAGTC | 1 cut(s) | 419 |
| ScrFI | CCNGG | 3 cut(s) | 15, 407, 412 |
| SetI | ASST | 5 cut(s) | 150, 325, 345, 463, 475 |
| SfaNI | GCATC | 1 cut(s) | 87 |
| SfcI | CTRYAG | 1 cut(s) | 111 |
| Sfr274I | CTCGAG | 1 cut(s) | 86 |
| SlaI | CTCGAG | 1 cut(s) | 86 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 435 |
| SmlI | CTYRAG | 2 cut(s) | 86, 356 |
| SmoI | CTYRAG | 2 cut(s) | 86, 356 |
| Sse9I | AATT | 3 cut(s) | 125, 237, 286 |
| SspMI | CTAG | 1 cut(s) | 294 |
| StyD4I | CCNGG | 3 cut(s) | 13, 405, 410 |
| TaqI | TCGA | 1 cut(s) | 87 |
| TasI | AATT | 3 cut(s) | 125, 237, 286 |
| TfiI | GAWTC | 4 cut(s) | 160, 242, 337, 381 |
| Tru1I | TTAA | 3 cut(s) | 152, 357, 395 |
| Tru9I | TTAA | 3 cut(s) | 152, 357, 395 |
| TscAI | CASTG | 1 cut(s) | 335 |
| TspDTI | ATGAA | 1 cut(s) | 381 |
| TspRI | CASTG | 1 cut(s) | 335 |
| Vha464I | CTTAAG | 1 cut(s) | 356 |
| XhoI | CTCGAG | 1 cut(s) | 86 |
| XmiI | GTMKAC | 1 cut(s) | 139 |
| XspI | CTAG | 1 cut(s) | 294 |
| Zsp2I | ATGCAT | 1 cut(s) | 102 |