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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g06640 FvH4_3g06680 |
| pyrus_communis | pycom03g06710 |
| rosa_chinensis | RchiOBHm_Chr7g0185271 |
| rosa_laevigata | RLG00000030277 |
| rosa_multiflora | Rmu_sc0000605.1_g000028 |
| rosa_roxburghii | Rroxscaffold_1G00051070 Rroxscaffold_3G00258470 |
| rosa_rugosa | Rorug04G0137600 |
| rosa_samantha | Rh2AG225600 Rh2DG233000 Rh3AG021000 Rh3BG021700 Rh3CG020400 Rh3CG354000 Rh3DG021500 Rh3DG357300 Rh4BG176500 Rh5AG269200 Rh5CG324900 Rh5CG409200 Rh5CG475200 Rh6DG366200 Rh7AG075400 Rh7DG072600 |
| rosa_wichuraiana | Rw3G028160 Rw5G040880 Rw7G006040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 235 |
| AcsI | RAATTY | 1 cut(s) | 21 |
| AcuI | CTGAAG | 2 cut(s) | 305, 513 |
| AfeI | AGCGCT | 1 cut(s) | 390 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 271, 430 |
| AflII | CTTAAG | 1 cut(s) | 374 |
| AjnI | CCWGG | 2 cut(s) | 423, 428 |
| AluBI | AGCT | 3 cut(s) | 244, 341, 479 |
| AluI | AGCT | 3 cut(s) | 244, 341, 479 |
| Ama87I | CYCGRG | 1 cut(s) | 182 |
| Aor51HI | AGCGCT | 1 cut(s) | 390 |
| AoxI | GGCC | 1 cut(s) | 426 |
| ApoI | RAATTY | 1 cut(s) | 21 |
| AspLEI | GCGC | 1 cut(s) | 391 |
| AsuHPI | GGTGA | 1 cut(s) | 373 |
| AvaI | CYCGRG | 1 cut(s) | 182 |
| BbsI | GAAGAC | 1 cut(s) | 174 |
| BccI | CCATC | 1 cut(s) | 456 |
| BciT130I | CCWGG | 2 cut(s) | 425, 430 |
| BclI | TGATCA | 1 cut(s) | 52 |
| BfaI | CTAG | 1 cut(s) | 312 |
| BfoI | RGCGCY | 1 cut(s) | 392 |
| BfrI | CTTAAG | 1 cut(s) | 374 |
| Bme1390I | CCNGG | 2 cut(s) | 425, 430 |
| BmeT110I | CYCGRG | 1 cut(s) | 182 |
| BmrFI | CCNGG | 2 cut(s) | 425, 430 |
| BmrI | ACTGGG | 1 cut(s) | 358 |
| BmsI | GCATC | 1 cut(s) | 183 |
| BmuI | ACTGGG | 1 cut(s) | 358 |
| BpiI | GAAGAC | 1 cut(s) | 174 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 284, 316, 325, 357 |
| BsaJI | CCNNGG | 2 cut(s) | 394, 429 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 271, 430 |
| Bse1I | ACTGG | 2 cut(s) | 353, 475 |
| BseBI | CCWGG | 2 cut(s) | 425, 430 |
| BseDI | CCNNGG | 2 cut(s) | 394, 429 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 271, 430 |
| BseMII | CTCAG | 2 cut(s) | 54, 113 |
| BseNI | ACTGG | 2 cut(s) | 353, 475 |
| BsgI | GTGCAG | 1 cut(s) | 329 |
| BshFI | GGCC | 1 cut(s) | 428 |
| BsiHKCI | CYCGRG | 1 cut(s) | 182 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 271, 430 |
| BsnI | GGCC | 1 cut(s) | 428 |
| BsoBI | CYCGRG | 1 cut(s) | 182 |
| Bsp143I | GATC | 1 cut(s) | 52 |
| BspANI | GGCC | 1 cut(s) | 428 |
| BspCNI | CTCAG | 2 cut(s) | 53, 112 |
| BspTI | CTTAAG | 1 cut(s) | 374 |
| BsrI | ACTGG | 2 cut(s) | 353, 475 |
| BssECI | CCNNGG | 2 cut(s) | 394, 429 |
| BssMI | GATC | 1 cut(s) | 52 |
| Bst2UI | CCWGG | 2 cut(s) | 425, 430 |
| Bst6I | CTCTTC | 1 cut(s) | 324 |
| BstAFI | CTTAAG | 1 cut(s) | 374 |
| BstDEI | CTNAG | 4 cut(s) | 10, 40, 99, 403 |
| BstH2I | RGCGCY | 1 cut(s) | 392 |
| BstHHI | GCGC | 1 cut(s) | 391 |
| BstKTI | GATC | 1 cut(s) | 55 |
| BstMBI | GATC | 1 cut(s) | 52 |
| BstNI | CCWGG | 2 cut(s) | 425, 430 |
| BstNSI | RCATGY | 1 cut(s) | 151 |
| BstSCI | CCNGG | 2 cut(s) | 423, 428 |
| BstV2I | GAAGAC | 1 cut(s) | 174 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 455 |
| BsuRI | GGCC | 1 cut(s) | 428 |
| BtsIMutI | CAGTG | 2 cut(s) | 32, 346 |
| CfoI | GCGC | 1 cut(s) | 391 |
| CviAII | CATG | 4 cut(s) | 104, 148, 197, 202 |
| CviJI | RGCY | 7 cut(s) | 244, 286, 329, 341, 428, 459, 479 |
| CviKI_1 | RGCY | 7 cut(s) | 244, 286, 329, 341, 428, 459, 479 |
| DdeI | CTNAG | 4 cut(s) | 10, 40, 99, 403 |
| DpnI | GATC | 1 cut(s) | 54 |
| DpnII | GATC | 1 cut(s) | 52 |
| Eam1104I | CTCTTC | 1 cut(s) | 324 |
| EarI | CTCTTC | 1 cut(s) | 324 |
| Eco47III | AGCGCT | 1 cut(s) | 390 |
| Eco57I | CTGAAG | 2 cut(s) | 305, 513 |
| Eco88I | CYCGRG | 1 cut(s) | 182 |
| EcoRI | GAATTC | 1 cut(s) | 21 |
| EcoRII | CCWGG | 2 cut(s) | 423, 428 |
| EcoT22I | ATGCAT | 1 cut(s) | 198 |
| FaeI | CATG | 4 cut(s) | 107, 151, 200, 205 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 357, 389 |
| FatI | CATG | 4 cut(s) | 103, 147, 196, 201 |
| FbaI | TGATCA | 1 cut(s) | 52 |
| FblI | GTMKAC | 1 cut(s) | 235 |
| FspBI | CTAG | 1 cut(s) | 312 |
| GlaI | GCGC | 1 cut(s) | 390 |
| HaeII | RGCGCY | 1 cut(s) | 392 |
| HaeIII | GGCC | 1 cut(s) | 428 |
| HhaI | GCGC | 1 cut(s) | 391 |
| Hin1II | CATG | 4 cut(s) | 107, 151, 200, 205 |
| Hin6I | GCGC | 1 cut(s) | 389 |
| HinP1I | GCGC | 1 cut(s) | 389 |
| HindIII | AAGCTT | 1 cut(s) | 242 |
| HinfI | GANTC | 4 cut(s) | 260, 355, 399, 443 |
| HphI | GGTGA | 1 cut(s) | 373 |
| Hpy166II | GTNNAC | 3 cut(s) | 122, 153, 236 |
| Hpy188I | TCNGA | 2 cut(s) | 274, 395 |
| Hpy188III | TCNNGA | 2 cut(s) | 184, 323 |
| Hpy8I | GTNNAC | 3 cut(s) | 122, 153, 236 |
| HpyCH4V | TGCA | 3 cut(s) | 76, 196, 346 |
| HpyF3I | CTNAG | 4 cut(s) | 10, 40, 99, 403 |
| Hsp92II | CATG | 4 cut(s) | 107, 151, 200, 205 |
| HspAI | GCGC | 1 cut(s) | 389 |
| Ksp22I | TGATCA | 1 cut(s) | 52 |
| Kzo9I | GATC | 1 cut(s) | 52 |
| LmnI | GCTCC | 1 cut(s) | 396 |
| LpnPI | CCDG | 9 cut(s) | 308, 334, 344, 410, 415, 437, 442, 456, 504 |
| LweI | GCATC | 1 cut(s) | 183 |
| MaeI | CTAG | 1 cut(s) | 312 |
| MaeIII | GTNAC | 2 cut(s) | 43, 107 |
| MalI | GATC | 1 cut(s) | 54 |
| MboI | GATC | 1 cut(s) | 52 |
| MboII | GAAGA | 3 cut(s) | 179, 261, 311 |
| MfeI | CAATTG | 1 cut(s) | 48 |
| MluCI | AATT | 5 cut(s) | 21, 48, 64, 221, 304 |
| MlyI | GAGTC | 1 cut(s) | 437 |
| MnlI | CCTC | 5 cut(s) | 7, 82, 286, 319, 389 |
| Mph1103I | ATGCAT | 1 cut(s) | 198 |
| MseI | TTAA | 4 cut(s) | 71, 248, 375, 413 |
| MslI | CAYNNNNRTG | 1 cut(s) | 453 |
| MspCI | CTTAAG | 1 cut(s) | 374 |
| MspR9I | CCNGG | 2 cut(s) | 425, 430 |
| MunI | CAATTG | 1 cut(s) | 48 |
| MvaI | CCWGG | 2 cut(s) | 425, 430 |
| NdeII | GATC | 1 cut(s) | 52 |
| NlaIII | CATG | 4 cut(s) | 107, 151, 200, 205 |
| NmuCI | GTSAC | 2 cut(s) | 43, 107 |
| NsiI | ATGCAT | 1 cut(s) | 198 |
| NspI | RCATGY | 1 cut(s) | 151 |
| PaeR7I | CTCGAG | 1 cut(s) | 182 |
| PfeI | GAWTC | 3 cut(s) | 260, 355, 399 |
| PleI | GAGTC | 1 cut(s) | 437 |
| PpsI | GAGTC | 1 cut(s) | 437 |
| Psp6I | CCWGG | 2 cut(s) | 423, 428 |
| PspGI | CCWGG | 2 cut(s) | 423, 428 |
| RseI | CAYNNNNRTG | 1 cut(s) | 453 |
| SaqAI | TTAA | 4 cut(s) | 71, 248, 375, 413 |
| Sau3AI | GATC | 1 cut(s) | 52 |
| SchI | GAGTC | 1 cut(s) | 437 |
| ScrFI | CCNGG | 2 cut(s) | 425, 430 |
| SetI | ASST | 8 cut(s) | 18, 118, 246, 343, 363, 481, 493, 513 |
| SfaNI | GCATC | 1 cut(s) | 183 |
| Sfr274I | CTCGAG | 1 cut(s) | 182 |
| SlaI | CTCGAG | 1 cut(s) | 182 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 453 |
| SmlI | CTYRAG | 2 cut(s) | 182, 374 |
| SmoI | CTYRAG | 2 cut(s) | 182, 374 |
| Sse9I | AATT | 5 cut(s) | 21, 48, 64, 221, 304 |
| SspMI | CTAG | 1 cut(s) | 312 |
| StyD4I | CCNGG | 2 cut(s) | 423, 428 |
| TaqI | TCGA | 2 cut(s) | 183, 441 |
| TasI | AATT | 5 cut(s) | 21, 48, 64, 221, 304 |
| TfiI | GAWTC | 3 cut(s) | 260, 355, 399 |
| Tru1I | TTAA | 4 cut(s) | 71, 248, 375, 413 |
| Tru9I | TTAA | 4 cut(s) | 71, 248, 375, 413 |
| TscAI | CASTG | 2 cut(s) | 32, 353 |
| TseFI | GTSAC | 2 cut(s) | 43, 107 |
| Tsp45I | GTSAC | 2 cut(s) | 43, 107 |
| TspDTI | ATGAA | 2 cut(s) | 173, 399 |
| TspRI | CASTG | 2 cut(s) | 32, 353 |
| Vha464I | CTTAAG | 1 cut(s) | 374 |
| XapI | RAATTY | 1 cut(s) | 21 |
| XceI | RCATGY | 1 cut(s) | 151 |
| XhoI | CTCGAG | 1 cut(s) | 182 |
| XmiI | GTMKAC | 1 cut(s) | 235 |
| XspI | CTAG | 1 cut(s) | 312 |
| Zsp2I | ATGCAT | 1 cut(s) | 198 |