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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g06640 FvH4_3g06680 |
| pyrus_communis | pycom03g06710 |
| rosa_chinensis | RchiOBHm_Chr7g0185271 |
| rosa_laevigata | RLG00000030277 |
| rosa_multiflora | Rmu_sc0000605.1_g000028 |
| rosa_roxburghii | Rroxscaffold_1G00051070 Rroxscaffold_3G00258470 |
| rosa_rugosa | Rorug04G0137600 |
| rosa_samantha | Rh2AG225600 Rh2DG233000 Rh3AG021000 Rh3BG021700 Rh3CG020400 Rh3CG354000 Rh3DG021500 Rh3DG357300 Rh4BG176500 Rh5AG269200 Rh5CG324900 Rh5CG409200 Rh5CG475200 Rh6DG366200 Rh7AG075400 Rh7DG072600 |
| rosa_wichuraiana | Rw3G028160 Rw5G040880 Rw7G006040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 43 |
| AcuI | CTGAAG | 2 cut(s) | 113, 321 |
| AfeI | AGCGCT | 1 cut(s) | 198 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 79, 238 |
| AflII | CTTAAG | 1 cut(s) | 182 |
| AjnI | CCWGG | 2 cut(s) | 231, 236 |
| AluBI | AGCT | 3 cut(s) | 52, 149, 287 |
| AluI | AGCT | 3 cut(s) | 52, 149, 287 |
| Aor51HI | AGCGCT | 1 cut(s) | 198 |
| AoxI | GGCC | 1 cut(s) | 234 |
| AspLEI | GCGC | 1 cut(s) | 199 |
| AsuHPI | GGTGA | 1 cut(s) | 181 |
| BccI | CCATC | 1 cut(s) | 264 |
| BciT130I | CCWGG | 2 cut(s) | 233, 238 |
| BfaI | CTAG | 1 cut(s) | 120 |
| BfoI | RGCGCY | 1 cut(s) | 200 |
| BfrI | CTTAAG | 1 cut(s) | 182 |
| Bme1390I | CCNGG | 2 cut(s) | 233, 238 |
| BmrFI | CCNGG | 2 cut(s) | 233, 238 |
| BmrI | ACTGGG | 1 cut(s) | 166 |
| BmuI | ACTGGG | 1 cut(s) | 166 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 92, 124, 133, 165 |
| BsaJI | CCNNGG | 2 cut(s) | 202, 237 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 79, 238 |
| Bse1I | ACTGG | 2 cut(s) | 161, 283 |
| BseBI | CCWGG | 2 cut(s) | 233, 238 |
| BseDI | CCNNGG | 2 cut(s) | 202, 237 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 79, 238 |
| BseNI | ACTGG | 2 cut(s) | 161, 283 |
| BsgI | GTGCAG | 1 cut(s) | 137 |
| BshFI | GGCC | 1 cut(s) | 236 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 79, 238 |
| BsnI | GGCC | 1 cut(s) | 236 |
| BspANI | GGCC | 1 cut(s) | 236 |
| BspTI | CTTAAG | 1 cut(s) | 182 |
| BsrI | ACTGG | 2 cut(s) | 161, 283 |
| BssECI | CCNNGG | 2 cut(s) | 202, 237 |
| Bst2UI | CCWGG | 2 cut(s) | 233, 238 |
| Bst6I | CTCTTC | 1 cut(s) | 132 |
| BstAFI | CTTAAG | 1 cut(s) | 182 |
| BstDEI | CTNAG | 1 cut(s) | 211 |
| BstH2I | RGCGCY | 1 cut(s) | 200 |
| BstHHI | GCGC | 1 cut(s) | 199 |
| BstNI | CCWGG | 2 cut(s) | 233, 238 |
| BstSCI | CCNGG | 2 cut(s) | 231, 236 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 263 |
| BsuRI | GGCC | 1 cut(s) | 236 |
| BtsIMutI | CAGTG | 1 cut(s) | 154 |
| CfoI | GCGC | 1 cut(s) | 199 |
| CviAII | CATG | 2 cut(s) | 5, 10 |
| CviJI | RGCY | 7 cut(s) | 52, 94, 137, 149, 236, 267, 287 |
| CviKI_1 | RGCY | 7 cut(s) | 52, 94, 137, 149, 236, 267, 287 |
| DdeI | CTNAG | 1 cut(s) | 211 |
| Eam1104I | CTCTTC | 1 cut(s) | 132 |
| EarI | CTCTTC | 1 cut(s) | 132 |
| Eco47III | AGCGCT | 1 cut(s) | 198 |
| Eco57I | CTGAAG | 2 cut(s) | 113, 321 |
| EcoRII | CCWGG | 2 cut(s) | 231, 236 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaeI | CATG | 2 cut(s) | 8, 13 |
| FaiI | YATR | 7 cut(s) | 6, 11, 140, 146, 261, 294, 326 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 165, 197 |
| FatI | CATG | 2 cut(s) | 4, 9 |
| FblI | GTMKAC | 1 cut(s) | 43 |
| FspBI | CTAG | 1 cut(s) | 120 |
| GlaI | GCGC | 1 cut(s) | 198 |
| HaeII | RGCGCY | 1 cut(s) | 200 |
| HaeIII | GGCC | 1 cut(s) | 236 |
| HhaI | GCGC | 1 cut(s) | 199 |
| Hin1II | CATG | 2 cut(s) | 8, 13 |
| Hin6I | GCGC | 1 cut(s) | 197 |
| HinP1I | GCGC | 1 cut(s) | 197 |
| HindIII | AAGCTT | 1 cut(s) | 50 |
| HinfI | GANTC | 4 cut(s) | 68, 163, 207, 251 |
| HphI | GGTGA | 1 cut(s) | 181 |
| Hpy166II | GTNNAC | 1 cut(s) | 44 |
| Hpy188I | TCNGA | 2 cut(s) | 82, 203 |
| Hpy188III | TCNNGA | 2 cut(s) | 131, 248 |
| Hpy8I | GTNNAC | 1 cut(s) | 44 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 154 |
| HpyF3I | CTNAG | 1 cut(s) | 211 |
| Hsp92II | CATG | 2 cut(s) | 8, 13 |
| HspAI | GCGC | 1 cut(s) | 197 |
| LmnI | GCTCC | 1 cut(s) | 204 |
| LpnPI | CCDG | 9 cut(s) | 116, 142, 152, 218, 223, 245, 250, 264, 312 |
| MaeI | CTAG | 1 cut(s) | 120 |
| MboII | GAAGA | 2 cut(s) | 69, 119 |
| MluCI | AATT | 2 cut(s) | 29, 112 |
| MlyI | GAGTC | 1 cut(s) | 245 |
| MnlI | CCTC | 3 cut(s) | 94, 127, 197 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 3 cut(s) | 56, 183, 221 |
| MslI | CAYNNNNRTG | 1 cut(s) | 261 |
| MspCI | CTTAAG | 1 cut(s) | 182 |
| MspR9I | CCNGG | 2 cut(s) | 233, 238 |
| MvaI | CCWGG | 2 cut(s) | 233, 238 |
| NlaIII | CATG | 2 cut(s) | 8, 13 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| PfeI | GAWTC | 3 cut(s) | 68, 163, 207 |
| PleI | GAGTC | 1 cut(s) | 245 |
| PpsI | GAGTC | 1 cut(s) | 245 |
| Psp6I | CCWGG | 2 cut(s) | 231, 236 |
| PspGI | CCWGG | 2 cut(s) | 231, 236 |
| RseI | CAYNNNNRTG | 1 cut(s) | 261 |
| SaqAI | TTAA | 3 cut(s) | 56, 183, 221 |
| SchI | GAGTC | 1 cut(s) | 245 |
| ScrFI | CCNGG | 2 cut(s) | 233, 238 |
| SetI | ASST | 6 cut(s) | 54, 151, 171, 289, 301, 321 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 261 |
| SmlI | CTYRAG | 1 cut(s) | 182 |
| SmoI | CTYRAG | 1 cut(s) | 182 |
| Sse9I | AATT | 2 cut(s) | 29, 112 |
| SspMI | CTAG | 1 cut(s) | 120 |
| StyD4I | CCNGG | 2 cut(s) | 231, 236 |
| TaqI | TCGA | 1 cut(s) | 249 |
| TasI | AATT | 2 cut(s) | 29, 112 |
| TfiI | GAWTC | 3 cut(s) | 68, 163, 207 |
| Tru1I | TTAA | 3 cut(s) | 56, 183, 221 |
| Tru9I | TTAA | 3 cut(s) | 56, 183, 221 |
| TscAI | CASTG | 1 cut(s) | 161 |
| TspDTI | ATGAA | 1 cut(s) | 207 |
| TspRI | CASTG | 1 cut(s) | 161 |
| Vha464I | CTTAAG | 1 cut(s) | 182 |
| XmiI | GTMKAC | 1 cut(s) | 43 |
| XspI | CTAG | 1 cut(s) | 120 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |