Rroxscaffold_4G00329230

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0002694
Physical Location & Seq
Forward (+)
62474911 .. 62476653
1743 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00329230.1

Sequence Viewer

Length: 1743 bp
ATGGCGAGTGAGGCCTTATGCAGAGAGAGAATGGCGCGTGAGAAAGAGAAGATGGACCTTAGTTGTCAGAGAATAGGCCCTGGTCTGGTGAAGCTTGAGATACAGAAAGCGGCGCGTACAGACGGTGAAATCACAGTAGTGAAGCCAGATGGGGAGGAGGCAATGGTGATTGATATTGACCTATCTGTAGATGCTATGCGAAAGCGTCTAGAGGAACCAGAAAGCGCAGACGCAACTCGTAGTGCGAGCTGCCGTGCCTCAAGGAGAAGAGTTCCTCAGAGCCTCATCGATGTCAGCCCAGAAGCGATCACTCCTGAAATGGTCTCAATCGGACCCTTTCACCACGGAAAGGTCTTACCGGAATCTGAAAGCTCCAAACTGTGGTTTCTTAATCAACTCCTTTCTCGACTAAAGAGAGATGATGGGGCTGATCATCTAGGAGATTTGTTTAAAGCCATGCAAAGATTGGAGAATTCAGCGAGAGCATTCTATGATGAAGACGTCCTCATGTCAAGCCTGGAGTTTATCCAAATGATGGTGCTTGATGGATGCTTTATCATTGAGCTGTTTCGACATCTTGGTCCAAATGAAGATGTCTCAGGTCACGATGATCCCATCTCGACCAAGCCATGGTTGATTCCAATTATCACTAGGGACCTCCTCAAGCTTGAAAACCAACTCCCTTTCTTCGTCCTTCAAGAATTGTTCAGAGTTACTGCCACTGCTGCTGATGTTGGGGATCCTCTAGCTTTACTTGCCTTGAAGTTCTTCAATCTTTCCTTGCCTAGGCCTAATGATGAAATCTTTAAAAGGATAGCAAAAGATGACTACAGCCACTTGCTTGGCTTGTTTCACTGCAGCTTCTGTTCCCCTCTGTATACTAATGAAAAATATCAGCCGTCACCGTTCCGGCGGATCCCAGTAGAGATACCAACGTCCCTGGCCTTCCCACAGCTCCCAAAACAAAGCAAAGACCACCGAGTGAGTCTACTAAGGTACTGGAGCGTTTCAATCCCCATCTTTTGTTTAAGGTGGAGCGTTTCTACCATATTTTATTGTTTAGGGTGGAGCATTGCAATTTTAAGATTCCTTTATAATATCCTTTCATATTGTTTGCGGTGGATTGTTTCCCTCACTCTACCCGACTCTGAAGAGTATCGCCATCCGGTCTTGTCAATCCAGTCTACCACACAACTGAGACCTTCTGGGGTCAAGTTTAAGACAAATGAAGCTGCAGACAGCTTCTTAGAGATCAATTTCAAAAACAGGGTTCTACAAATCCCACCTATTACCATCAATGAGCTCACCATTACCCTCTTCATCAACTGCATAGCCTATGAACAGTGCTACTATAACCGGTTCACCAGTGGCGGTCAAGGCTGCTTCACCCATTATATTGCCTTCTTGAGCTGTCTGATCAATTCACCTAAAGACGTCGCATTCCTTTGTGCTAAAGGAATTATTGCTAGTTACTCTTACAACGATTATTATATAGCAGGGATGCTCAACAAGTTGGGGAGGAAAGTTTATTTTAACAGAAATACTTGTGGTTACCTTGATGGGGTATTCAGAGCCGTGGAGGCCTATTACAACAGCCATTGGGGTACCTTTATGCGAACTTATTTCAGCACTCCGTGGTCCTTCATTTCAATTGTTTCAGCCGTCATCCTTCTTGTCCTCACCGGAGCCCAAACTGTTCTGGCTGTTTTGAGCTACATCGACCAGAGAGGAAAGCAACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

580

Amino Acids

66.11

Weight (kDa)

7.12

Isoelectric Point (pI)

45.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 90 - 560 2.4e-103 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1095
AasI GACNNNNNNGTC 1 cut(s) 579
AatII GACGTC 2 cut(s) 504, 1437
Acc65I GGTACC 1 cut(s) 1604
AccB1I GGYRCC 1 cut(s) 1604
AccB7I CCANNNNNTGG 3 cut(s) 381, 535, 630
AccI GTMKAC 3 cut(s) 878, 988, 1184
AccII CGCG 2 cut(s) 37, 115
AciI CCGC 4 cut(s) 110, 913, 1117, 1371
AclWI GGATC 5 cut(s) 605, 734, 747, 910, 923
AcsI RAATTY 1 cut(s) 472
AcuI CTGAAG 1 cut(s) 1170
AcyI GRCGYC 2 cut(s) 501, 1434
AdeI CACNNNGTG 2 cut(s) 982, 1635
AfaI GTAC 3 cut(s) 118, 998, 1606
AfiI CCNNNNNNNGG 7 cut(s) 85, 349, 381, 535, 630, 786, 1561
AgeI ACCGGT 1 cut(s) 1356
AgsI TTSAA 7 cut(s) 671, 698, 763, 772, 1011, 1261, 1650
AjnI CCWGG 3 cut(s) 79, 516, 939
AleI CACNNNNGTG 1 cut(s) 137
Alw21I GWGCWC 1 cut(s) 1305
Alw26I GTCTC 3 cut(s) 328, 601, 1192
AlwI GGATC 5 cut(s) 605, 734, 747, 910, 923
AlwNI CAGNNNCTG 1 cut(s) 864
AoxI GGCC 5 cut(s) 12, 76, 788, 942, 1581
ApeKI GCWGC 5 cut(s) 249, 725, 858, 1232, 1380
ApoI RAATTY 1 cut(s) 472
AsiGI ACCGGT 1 cut(s) 1356
Asp700I GAANNNNTTC 1 cut(s) 767
Asp718I GGTACC 1 cut(s) 1604
AspA2I CCTAGG 1 cut(s) 785
AspLEI GCGC 3 cut(s) 37, 115, 227
AspS9I GGNCC 6 cut(s) 55, 77, 332, 581, 655, 1638
AvaII GGWCC 5 cut(s) 55, 332, 581, 655, 1638
AvrII CCTAGG 1 cut(s) 785
BaeI ACNNNNGTAYC 2 cut(s) 920, 953
BamHI GGATCC 2 cut(s) 739, 915
BanI GGYRCC 1 cut(s) 1604
BanII GRGCYC 2 cut(s) 1305, 1690
BbsI GAAGAC 1 cut(s) 504
Bbv12I GWGCWC 1 cut(s) 1305
BbvI GCAGC 5 cut(s) 236, 712, 870, 1219, 1367
BceAI ACGGC 4 cut(s) 237, 883, 1559, 1646
BciT130I CCWGG 3 cut(s) 81, 518, 941
BclI TGATCA 2 cut(s) 430, 1416
BcoDI GTCTC 3 cut(s) 328, 601, 1192
BfaI CTAG 6 cut(s) 209, 437, 651, 746, 786, 1467
BfmI CTRYAG 4 cut(s) 186, 829, 856, 1233
BglI GCCNNNNNGGC 1 cut(s) 1580
BisI GCNGC 6 cut(s) 111, 250, 726, 859, 1233, 1381
BlnI CCTAGG 1 cut(s) 785
BlsI GCNGC 6 cut(s) 112, 251, 727, 860, 1234, 1382
Bme1390I CCNGG 3 cut(s) 81, 518, 941
Bme18I GGWCC 5 cut(s) 55, 332, 581, 655, 1638
BmgT120I GGNCC 6 cut(s) 55, 77, 332, 581, 655, 1638
BmiI GGNNCC 7 cut(s) 216, 334, 656, 741, 917, 1606, 1687
BmrFI CCNGG 3 cut(s) 81, 518, 941
BmrI ACTGGG 1 cut(s) 914
BmsI GCATC 3 cut(s) 181, 539, 1491
BmuI ACTGGG 1 cut(s) 914
BpiI GAAGAC 1 cut(s) 504
BpmI CTGGAG 2 cut(s) 539, 1021
BpuEI CTTGAG 4 cut(s) 116, 244, 647, 1426
Bsa29I ATCGAT 1 cut(s) 288
BsaHI GRCGYC 2 cut(s) 501, 1434
BsaI GGTCTC 2 cut(s) 328, 1192
BsaJI CCNNGG 7 cut(s) 79, 343, 629, 785, 939, 1575, 1634
BsaWI WCCGGW 4 cut(s) 358, 1165, 1356, 1682
Bsc4I CCNNNNNNNGG 7 cut(s) 85, 349, 381, 535, 630, 786, 1561
Bse118I RCCGGY 1 cut(s) 1356
Bse1I ACTGG 4 cut(s) 920, 1004, 1180, 1365
Bse3DI GCAATG 2 cut(s) 168, 1071
BseBI CCWGG 3 cut(s) 81, 518, 941
BseCI ATCGAT 1 cut(s) 288
BseDI CCNNGG 7 cut(s) 79, 343, 629, 785, 939, 1575, 1634
BseGI GGATG 4 cut(s) 554, 1162, 1506, 1665
BseLI CCNNNNNNNGG 7 cut(s) 85, 349, 381, 535, 630, 786, 1561
BseMI GCAATG 2 cut(s) 168, 1071
BseMII CTCAG 3 cut(s) 290, 612, 1187
BseNI ACTGG 4 cut(s) 920, 1004, 1180, 1365
BseRI GAGGAG 2 cut(s) 170, 650
BseXI GCAGC 5 cut(s) 236, 712, 870, 1219, 1367
Bsh1236I CGCG 2 cut(s) 37, 115
BshFI GGCC 5 cut(s) 14, 78, 790, 944, 1583
BshNI GGYRCC 1 cut(s) 1604
BshTI ACCGGT 1 cut(s) 1356
BshVI ATCGAT 1 cut(s) 288
BsiHKAI GWGCWC 1 cut(s) 1305
BsiSI CCGG 5 cut(s) 359, 910, 1166, 1357, 1683
BslFI GGGAC 2 cut(s) 668, 922
BslI CCNNNNNNNGG 7 cut(s) 85, 349, 381, 535, 630, 786, 1561
BsmAI GTCTC 3 cut(s) 328, 601, 1192
BsmFI GGGAC 2 cut(s) 668, 922
BsmI GAATGC 2 cut(s) 485, 1439
BsnI GGCC 5 cut(s) 14, 78, 790, 944, 1583
Bso31I GGTCTC 2 cut(s) 328, 1192
Bsp1286I GDGCHC 2 cut(s) 1305, 1690
Bsp143I GATC 7 cut(s) 306, 430, 610, 739, 915, 1251, 1416
Bsp19I CCATGG 1 cut(s) 629
BspACI CCGC 4 cut(s) 110, 913, 1117, 1371
BspANI GGCC 5 cut(s) 14, 78, 790, 944, 1583
BspCNI CTCAG 3 cut(s) 289, 611, 1188
BspDI ATCGAT 1 cut(s) 288
BspFNI CGCG 2 cut(s) 37, 115
BspLI GGNNCC 7 cut(s) 216, 334, 656, 741, 917, 1606, 1687
BspMAI CTGCAG 2 cut(s) 860, 1237
BspPI GGATC 5 cut(s) 605, 734, 747, 910, 923
BspT107I GGYRCC 1 cut(s) 1604
BspTNI GGTCTC 2 cut(s) 328, 1192
BsrDI GCAATG 2 cut(s) 168, 1071
BsrFI RCCGGY 1 cut(s) 1356
BsrI ACTGG 4 cut(s) 920, 1004, 1180, 1365
BssAI RCCGGY 1 cut(s) 1356
BssECI CCNNGG 7 cut(s) 79, 343, 629, 785, 939, 1575, 1634
BssMI GATC 7 cut(s) 306, 430, 610, 739, 915, 1251, 1416
BssNAI GTATAC 1 cut(s) 879
BssNI GRCGYC 2 cut(s) 501, 1434
BssT1I CCWWGG 2 cut(s) 629, 785
Bst1107I GTATAC 1 cut(s) 879
Bst2UI CCWGG 3 cut(s) 81, 518, 941
Bst4CI ACNGT 7 cut(s) 125, 136, 381, 906, 1344, 1696, 1740
Bst6I CTCTTC 3 cut(s) 262, 1146, 1322
BstACI GRCGYC 2 cut(s) 501, 1434
BstC8I GCNNGC 1 cut(s) 247
BstDEI CTNAG 6 cut(s) 59, 276, 598, 992, 1196, 1246
BstDSI CCRYGG 4 cut(s) 343, 629, 1575, 1634
BstEII GGTNACC 1 cut(s) 1550
BstENI CCTNNNNNAGG 1 cut(s) 784
BstF5I GGATG 4 cut(s) 554, 1162, 1506, 1665
BstFNI CGCG 2 cut(s) 37, 115
BstHHI GCGC 3 cut(s) 37, 115, 227
BstKTI GATC 7 cut(s) 309, 433, 613, 742, 918, 1254, 1419
BstMAI GTCTC 3 cut(s) 328, 601, 1192
BstMBI GATC 7 cut(s) 306, 430, 610, 739, 915, 1251, 1416
BstMWI GCNNNNNNNGC 5 cut(s) 11, 725, 755, 1377, 1580
BstNI CCWGG 3 cut(s) 81, 518, 941
BstPI GGTNACC 1 cut(s) 1550
BstSCI CCNGG 3 cut(s) 79, 516, 939
BstSFI CTRYAG 4 cut(s) 186, 829, 856, 1233
BstUI CGCG 2 cut(s) 37, 115
BstV1I GCAGC 5 cut(s) 236, 712, 870, 1219, 1367
BstV2I GAAGAC 1 cut(s) 504
BstX2I RGATCY 2 cut(s) 739, 915
BstXI CCANNNNNNTGG 1 cut(s) 842
BstYI RGATCY 2 cut(s) 739, 915
BstZ17I GTATAC 1 cut(s) 879
Bsu15I ATCGAT 1 cut(s) 288
BsuRI GGCC 5 cut(s) 14, 78, 790, 944, 1583
BsuTUI ATCGAT 1 cut(s) 288
BtgI CCRYGG 4 cut(s) 343, 629, 1575, 1634
BtsCI GGATG 4 cut(s) 554, 1162, 1506, 1665
BtsI GCAGTG 2 cut(s) 720, 853
BtsIMutI CAGTG 4 cut(s) 720, 853, 1349, 1372
Cac8I GCNNGC 1 cut(s) 247
CaiI CAGNNNCTG 1 cut(s) 864
CfoI GCGC 3 cut(s) 37, 115, 227
Cfr10I RCCGGY 1 cut(s) 1356
Cfr13I GGNCC 6 cut(s) 55, 77, 332, 581, 655, 1638
ClaI ATCGAT 1 cut(s) 288
CseI GACGC 2 cut(s) 194, 239
Csp6I GTAC 3 cut(s) 117, 997, 1605
CspAI ACCGGT 1 cut(s) 1356
CviAII CATG 3 cut(s) 457, 508, 630
CviQI GTAC 3 cut(s) 117, 997, 1605
DdeI CTNAG 6 cut(s) 59, 276, 598, 992, 1196, 1246
DpnI GATC 7 cut(s) 308, 432, 612, 741, 917, 1253, 1418
DpnII GATC 7 cut(s) 306, 430, 610, 739, 915, 1251, 1416
DraI TTTAAA 2 cut(s) 451, 808
DraIII CACNNNGTG 2 cut(s) 982, 1635
DrdI GACNNNNNNGTC 1 cut(s) 579
DseDI GACNNNNNNGTC 1 cut(s) 579
Eam1104I CTCTTC 3 cut(s) 262, 1146, 1322
EarI CTCTTC 3 cut(s) 262, 1146, 1322
EciI GGCGGA 1 cut(s) 928
Ecl136II GAGCTC 1 cut(s) 1303
Eco130I CCWWGG 2 cut(s) 629, 785
Eco147I AGGCCT 3 cut(s) 14, 790, 1583
Eco24I GRGCYC 2 cut(s) 1305, 1690
Eco31I GGTCTC 2 cut(s) 328, 1192
Eco47I GGWCC 5 cut(s) 55, 332, 581, 655, 1638
Eco53kI GAGCTC 1 cut(s) 1303
Eco57I CTGAAG 1 cut(s) 1170
Eco91I GGTNACC 1 cut(s) 1550
EcoICRI GAGCTC 1 cut(s) 1303
EcoNI CCTNNNNNAGG 1 cut(s) 784
EcoO109I RGGNCCY 2 cut(s) 77, 655
EcoO65I GGTNACC 1 cut(s) 1550
EcoRI GAATTC 1 cut(s) 472
EcoRII CCWGG 3 cut(s) 79, 516, 939
EcoT14I CCWWGG 2 cut(s) 629, 785
EcoT38I GRGCYC 2 cut(s) 1305, 1690
ErhI CCWWGG 2 cut(s) 629, 785
FaeI CATG 3 cut(s) 460, 511, 633
FaqI GGGAC 2 cut(s) 668, 922
FatI CATG 3 cut(s) 456, 507, 629
FbaI TGATCA 2 cut(s) 430, 1416
FblI GTMKAC 3 cut(s) 878, 988, 1184
Fnu4HI GCNGC 6 cut(s) 111, 250, 726, 859, 1233, 1381
FokI GGATG 4 cut(s) 561, 1149, 1513, 1652
FriOI GRGCYC 2 cut(s) 1305, 1690
Fsp4HI GCNGC 6 cut(s) 111, 250, 726, 859, 1233, 1381
FspBI CTAG 6 cut(s) 209, 437, 651, 746, 786, 1467
GlaI GCGC 3 cut(s) 36, 114, 226
GluI GCNGC 6 cut(s) 111, 250, 726, 859, 1233, 1381
GsuI CTGGAG 2 cut(s) 539, 1021
HaeIII GGCC 5 cut(s) 14, 78, 790, 944, 1583
HapII CCGG 5 cut(s) 359, 910, 1166, 1357, 1683
HgaI GACGC 2 cut(s) 194, 239
HhaI GCGC 3 cut(s) 37, 115, 227
Hin1I GRCGYC 2 cut(s) 501, 1434
Hin1II CATG 3 cut(s) 460, 511, 633
Hin6I GCGC 3 cut(s) 35, 113, 225
HinP1I GCGC 3 cut(s) 35, 113, 225
HindIII AAGCTT 2 cut(s) 92, 665
HinfI GANTC 5 cut(s) 362, 637, 985, 1086, 1145
HpaII CCGG 5 cut(s) 359, 910, 1166, 1357, 1683
Hpy166II GTNNAC 4 cut(s) 879, 989, 1185, 1362
Hpy188I TCNGA 8 cut(s) 69, 279, 332, 367, 710, 1150, 1416, 1571
Hpy188III TCNNGA 7 cut(s) 209, 314, 405, 605, 619, 698, 1405
Hpy8I GTNNAC 4 cut(s) 879, 989, 1185, 1362
Hpy99I CGWCG 1 cut(s) 1439
HpyAV CCTTC 6 cut(s) 704, 955, 1212, 1411, 1651, 1679
HpyCH4III ACNGT 7 cut(s) 125, 136, 381, 906, 1344, 1696, 1740
HpyCH4IV ACGT 3 cut(s) 501, 935, 1434
HpyCH4V TGCA 6 cut(s) 21, 460, 858, 1076, 1235, 1329
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 725, 755, 1377, 1580
HpyF3I CTNAG 6 cut(s) 59, 276, 598, 992, 1196, 1246
HpySE526I ACGT 3 cut(s) 501, 935, 1434
Hsp92I GRCGYC 2 cut(s) 501, 1434
Hsp92II CATG 3 cut(s) 460, 511, 633
HspAI GCGC 3 cut(s) 35, 113, 225
KpnI GGTACC 1 cut(s) 1608
Ksp22I TGATCA 2 cut(s) 430, 1416
Kzo9I GATC 7 cut(s) 306, 430, 610, 739, 915, 1251, 1416
LmnI GCTCC 6 cut(s) 377, 960, 1002, 1035, 1068, 1685
Lsp1109I GCAGC 5 cut(s) 236, 712, 870, 1219, 1367
LweI GCATC 3 cut(s) 181, 539, 1491
MaeI CTAG 6 cut(s) 209, 437, 651, 746, 786, 1467
MaeII ACGT 3 cut(s) 501, 935, 1434
MaeIII GTNAC 5 cut(s) 602, 712, 900, 1469, 1550
MalI GATC 7 cut(s) 308, 432, 612, 741, 917, 1253, 1418
MboI GATC 7 cut(s) 306, 430, 610, 739, 915, 1251, 1416
MboII GAAGA 8 cut(s) 61, 279, 509, 602, 679, 760, 1163, 1309
MfeI CAATTG 1 cut(s) 1650
MflI RGATCY 2 cut(s) 739, 915
MhlI GDGCHC 2 cut(s) 1305, 1690
MluCI AATT 8 cut(s) 472, 642, 701, 1077, 1255, 1420, 1458, 1650
MlyI GAGTC 2 cut(s) 994, 1139
MroXI GAANNNNTTC 1 cut(s) 767
MseI TTAA 7 cut(s) 390, 450, 807, 1028, 1082, 1218, 1533
MslI CAYNNNNRTG 1 cut(s) 137
MspI CCGG 5 cut(s) 359, 910, 1166, 1357, 1683
MspR9I CCNGG 3 cut(s) 81, 518, 941
MunI CAATTG 1 cut(s) 1650
Mva1269I GAATGC 2 cut(s) 485, 1439
MvaI CCWGG 3 cut(s) 81, 518, 941
MvnI CGCG 2 cut(s) 37, 115
MwoI GCNNNNNNNGC 5 cut(s) 11, 725, 755, 1377, 1580
NcoI CCATGG 1 cut(s) 629
NdeII GATC 7 cut(s) 306, 430, 610, 739, 915, 1251, 1416
NlaIII CATG 3 cut(s) 460, 511, 633
NlaIV GGNNCC 7 cut(s) 216, 334, 656, 741, 917, 1606, 1687
NmuCI GTSAC 2 cut(s) 602, 900
OliI CACNNNNGTG 1 cut(s) 137
PceI AGGCCT 3 cut(s) 14, 790, 1583
PctI GAATGC 2 cut(s) 485, 1439
PdmI GAANNNNTTC 1 cut(s) 767
PfeI GAWTC 3 cut(s) 362, 637, 1086
PflMI CCANNNNNTGG 3 cut(s) 381, 535, 630
PinAI ACCGGT 1 cut(s) 1356
PkrI GCNGC 6 cut(s) 112, 251, 727, 860, 1234, 1382
PleI GAGTC 2 cut(s) 993, 1139
PpsI GAGTC 2 cut(s) 993, 1139
PpuMI RGGWCCY 1 cut(s) 655
PsiI TTATAA 1 cut(s) 1095
Psp124BI GAGCTC 1 cut(s) 1305
Psp5II RGGWCCY 1 cut(s) 655
Psp6I CCWGG 3 cut(s) 79, 516, 939
PspEI GGTNACC 1 cut(s) 1550
PspGI CCWGG 3 cut(s) 79, 516, 939
PspN4I GGNNCC 7 cut(s) 216, 334, 656, 741, 917, 1606, 1687
PspPI GGNCC 6 cut(s) 55, 77, 332, 581, 655, 1638
PspPPI RGGWCCY 1 cut(s) 655
PstI CTGCAG 2 cut(s) 860, 1237
PstNI CAGNNNCTG 1 cut(s) 864
PsuI RGATCY 2 cut(s) 739, 915
RsaI GTAC 3 cut(s) 118, 998, 1606
RsaNI GTAC 3 cut(s) 117, 997, 1605
RseI CAYNNNNRTG 1 cut(s) 137
SacI GAGCTC 1 cut(s) 1305
SaqAI TTAA 7 cut(s) 390, 450, 807, 1028, 1082, 1218, 1533
SatI GCNGC 6 cut(s) 111, 250, 726, 859, 1233, 1381
Sau3AI GATC 7 cut(s) 306, 430, 610, 739, 915, 1251, 1416
Sau96I GGNCC 6 cut(s) 55, 77, 332, 581, 655, 1638
SchI GAGTC 2 cut(s) 994, 1139
ScrFI CCNGG 3 cut(s) 81, 518, 941
SduI GDGCHC 2 cut(s) 1305, 1690
SfaNI GCATC 3 cut(s) 181, 539, 1491
SfcI CTRYAG 4 cut(s) 186, 829, 856, 1233
SinI GGWCC 5 cut(s) 55, 332, 581, 655, 1638
SmiMI CAYNNNNRTG 1 cut(s) 137
SmlI CTYRAG 4 cut(s) 95, 259, 662, 1405
SmoI CTYRAG 4 cut(s) 95, 259, 662, 1405
Sse9I AATT 8 cut(s) 472, 642, 701, 1077, 1255, 1420, 1458, 1650
SseBI AGGCCT 3 cut(s) 14, 790, 1583
SsiI CCGC 4 cut(s) 110, 913, 1117, 1371
SspMI CTAG 6 cut(s) 209, 437, 651, 746, 786, 1467
SstI GAGCTC 1 cut(s) 1305
StuI AGGCCT 3 cut(s) 14, 790, 1583
StyD4I CCNGG 3 cut(s) 79, 516, 939
StyI CCWWGG 2 cut(s) 629, 785
TaaI ACNGT 7 cut(s) 125, 136, 381, 906, 1344, 1696, 1740
TaiI ACGT 3 cut(s) 504, 938, 1437
TaqI TCGA 5 cut(s) 288, 406, 571, 620, 1719
TasI AATT 8 cut(s) 472, 642, 701, 1077, 1255, 1420, 1458, 1650
TauI GCSGC 1 cut(s) 113
TfiI GAWTC 3 cut(s) 362, 637, 1086
Tru1I TTAA 7 cut(s) 390, 450, 807, 1028, 1082, 1218, 1533
Tru9I TTAA 7 cut(s) 390, 450, 807, 1028, 1082, 1218, 1533
TscAI CASTG 4 cut(s) 727, 860, 1349, 1372
TseFI GTSAC 2 cut(s) 602, 900
TseI GCWGC 5 cut(s) 249, 725, 858, 1232, 1380
Tsp45I GTSAC 2 cut(s) 602, 900
TspDTI ATGAA 9 cut(s) 510, 603, 813, 900, 1095, 1242, 1309, 1353, 1633
TspGWI ACGGA 2 cut(s) 360, 1623
TspRI CASTG 4 cut(s) 727, 860, 1349, 1372
Van91I CCANNNNNTGG 3 cut(s) 381, 535, 630
VpaK11BI GGWCC 5 cut(s) 55, 332, 581, 655, 1638
XagI CCTNNNNNAGG 1 cut(s) 784
XapI RAATTY 1 cut(s) 472
XbaI TCTAGA 1 cut(s) 208
XcmI CCANNNNNNNNNTGG 1 cut(s) 463
XmaJI CCTAGG 1 cut(s) 785
XmiI GTMKAC 3 cut(s) 878, 988, 1184
XmnI GAANNNNTTC 1 cut(s) 767
XspI CTAG 6 cut(s) 209, 437, 651, 746, 786, 1467
ZraI GACGTC 2 cut(s) 502, 1435
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.