Rh3DG170600

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0002694
Physical Location & Seq
Reverse (-)
14945257 .. 14947262
2006 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG170600.1

Sequence Viewer

Length: 1653 bp
ATGGCGCGTACTGATGGTGAAATCACAGTAGTAGAGCCAAATGGGGAGGAGACAGTGGTGATTGATATTGACCGATCTGTAGCTGCTATGCGATTGTGTCTACCGGAAACCACAATCGCCGAAACGAAAACCATATTGGTACCGGAAGATGCATTCTACCCTGGCTCAAGAAGCAGAGTTCCTCAAAGCCTCATCAATATCAGCCCAACAGCGATCGCTCCTGAAATGGTCTCCATCGGACCTTTTTACCACGGAAAGGAGTTACAGCTGGAATTTGAAAGCTCCAAATGGTGGTTTCTTAATCAACTCCTTTCTCGAACAAAGAGACATGGCGGGCCTGATCGTCTAAGAGATCTGCTTGAAGCCGTACAAAAATTGGAGAATAGAGCGAGAGCATTCTATGATGAGGACGTCCACATGTCAAGCCCAAAGTTTATCGAAATGATGGTGCTTGATGGATGCTTTATCATTGAGCTGTTTCGACATCTTGGTAGAAATGAAGATGTCTTGGGTTTCGATAATCCCATCTCTACCAAGCCATGGTTGATTCCAATTATCACTAGTGACCTCCTCAAGCTTGAAAACCAACTCCCTTTATTCGTCCTTGAAGAATTGTTCGAAGTTACTGCCACTGCTGAGGTTGGGGATCCTCTAGCTTTACTTGCCTTGAAGTTCTTCAATCATTCCTTGCCTAGGGATGATGAAGTCCTTAAAAGTCTAGTATTAGATGACTGCGGACACTTGCTTGGCTTGTTTCACTACAGCTTCTGTCCCACTCGATATATAGATAACAAACATCAGCAGCTGTCACATTTCCGGCTGATCCCAGCAGAGCTTCCACCGTTCCTGGCCTTCCCTCCGCTCCCAGAACAAAGCGAAGATCACCGAGTCAGTCTACTTAGGTACTGGAGCGTTTCAATCCCCATCTTTTGTTTAAGGTCAAGCTTTTCTACCATTTTTTATTGTTTAGGGTGGAGCATTGCAATTTTAAGACTCCTTTATAGTATCCTTTTCTATTGTTTGCGGTGGAGCGTTTCAATCCTTGCAAGATTTCTTTCCCTAACTCTACCCAACTCTGAAGAGTATCGCCATCCGGTCCTGTCAGTCCAGTCTACCACACAACTGAGACCCTCTGGGGTCAAGTTTAAGCCACACAAAGCAGACAGCTTCTTAGAGATCAATTTCAGAAATAGGGTTCTACACATCCCACCTATTACCATCAATGACCTCACCATTACCGTTTTTATCAACTGCCTAGCCTATGAACGCTTGTACCACTTCCGCCGTAACTGCTTCACCCATTATATTGCCTTCTTGAGCTGTCTGATCAATTCACCTAGAGACGTCGCATTCCTTTGTGCTGAAGGGGTTATTGCTAGTTACTCTCACAACGATTATTACATAGCAGGGCTGTTCAACAAATTGGGGGAAAAAGTTCATTTTCACAGAAATACTTGTGGCTACCTTGACGGGGAATTCAGAGCCCTGGAGGCCTATTATAACAGCTATTGGGGTACCTTTATGCGAACTTATTTCAGCACTCCATGGTCCTTCATTTCAGTAGTTTCAGCCGTCATCCTTCTTGTCCTCACCGGAGGCCAAACTGTTCTGGCTGTTTTGAGCTACATCGACCAGAGAGGAAAGCAACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

550

Amino Acids

63.12

Weight (kDa)

6.15

Isoelectric Point (pI)

51.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 59 - 530 3.8e-98 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1500
AatII GACGTC 2 cut(s) 414, 1347
Acc65I GGTACC 2 cut(s) 139, 1514
AccB1I GGYRCC 2 cut(s) 139, 1514
AccB7I CCANNNNNTGG 2 cut(s) 291, 540
AccBSI CCGCTC 1 cut(s) 862
AccI GTMKAC 3 cut(s) 100, 895, 1112
AccII CGCG 1 cut(s) 7
AciI CCGC 5 cut(s) 333, 735, 860, 1024, 1282
AclWI GGATC 3 cut(s) 641, 654, 817
AcsI RAATTY 2 cut(s) 272, 1475
AcuI CTGAAG 2 cut(s) 1098, 1383
AcyI GRCGYC 2 cut(s) 411, 1344
AfaI GTAC 6 cut(s) 10, 141, 369, 905, 1274, 1516
AfiI CCNNNNNNNGG 5 cut(s) 256, 291, 540, 693, 1471
AflIII ACRYGT 1 cut(s) 417
AgsI TTSAA 9 cut(s) 278, 362, 581, 608, 670, 679, 918, 1038, 1417
AhlI ACTAGT 1 cut(s) 560
AjnI CCWGG 3 cut(s) 160, 846, 1485
AjuI GAANNNNNNNTTGG 2 cut(s) 119, 151
Alw26I GTCTC 5 cut(s) 44, 235, 319, 1120, 1335
AlwI GGATC 3 cut(s) 641, 654, 817
AlwNI CAGNNNCTG 2 cut(s) 768, 805
AoxI GGCC 4 cut(s) 335, 849, 1491, 1597
ApeKI GCWGC 2 cut(s) 83, 802
ApoI RAATTY 2 cut(s) 272, 1475
AsiSI GCGATCGC 1 cut(s) 216
Asp700I GAANNNNTTC 2 cut(s) 674, 1434
Asp718I GGTACC 2 cut(s) 139, 1514
AspA2I CCTAGG 1 cut(s) 692
AspLEI GCGC 1 cut(s) 7
AspS9I GGNCC 4 cut(s) 239, 335, 1096, 1548
AsuHPI GGTGA 7 cut(s) 29, 70, 875, 1222, 1288, 1326, 1582
AsuII TTCGAA 1 cut(s) 618
AvaII GGWCC 3 cut(s) 239, 1096, 1548
AvrII CCTAGG 1 cut(s) 692
BaeI ACNNNNGTAYC 2 cut(s) 1256, 1289
BamHI GGATCC 1 cut(s) 646
BanI GGYRCC 2 cut(s) 139, 1514
BanII GRGCYC 1 cut(s) 1486
BbvCI CCTCAGC 1 cut(s) 636
BbvI GCAGC 2 cut(s) 70, 814
BccI CCATC 8 cut(s) 8, 242, 439, 449, 533, 932, 1098, 1226
BceAI ACGGC 3 cut(s) 350, 1269, 1556
BcgI CGANNNNNNTGC 2 cut(s) 608, 642
BciT130I CCWGG 3 cut(s) 162, 848, 1487
BciVI GTATCC 1 cut(s) 1016
BclI TGATCA 1 cut(s) 1326
BcoDI GTCTC 5 cut(s) 44, 235, 319, 1120, 1335
BcuI ACTAGT 1 cut(s) 560
BfaI CTAG 7 cut(s) 561, 653, 693, 719, 1256, 1338, 1377
BfmI CTRYAG 2 cut(s) 78, 760
BfuI GTATCC 1 cut(s) 1016
BglI GCCNNNNNGGC 1 cut(s) 1490
BglII AGATCT 1 cut(s) 352
BisI GCNGC 2 cut(s) 84, 803
BlnI CCTAGG 1 cut(s) 692
BlsI GCNGC 2 cut(s) 85, 804
Bme1390I CCNGG 3 cut(s) 162, 848, 1487
Bme18I GGWCC 3 cut(s) 239, 1096, 1548
BmgT120I GGNCC 4 cut(s) 239, 335, 1096, 1548
BmiI GGNNCC 3 cut(s) 141, 648, 1516
BmrFI CCNGG 3 cut(s) 162, 848, 1487
BmsI GCATC 2 cut(s) 139, 449
BpmI CTGGAG 2 cut(s) 928, 1508
Bpu10I CCTNAGC 1 cut(s) 636
Bpu14I TTCGAA 1 cut(s) 618
BpuEI CTTGAG 3 cut(s) 151, 557, 1336
BsaHI GRCGYC 2 cut(s) 411, 1344
BsaI GGTCTC 2 cut(s) 235, 1120
BsaJI CCNNGG 6 cut(s) 160, 250, 539, 692, 1485, 1544
BsaWI WCCGGW 4 cut(s) 103, 142, 1093, 1592
Bsc4I CCNNNNNNNGG 5 cut(s) 256, 291, 540, 693, 1471
Bse1I ACTGG 2 cut(s) 911, 1108
Bse3DI GCAATG 1 cut(s) 978
BseBI CCWGG 3 cut(s) 162, 848, 1487
BseDI CCNNGG 6 cut(s) 160, 250, 539, 692, 1485, 1544
BseGI GGATG 5 cut(s) 464, 703, 1090, 1203, 1575
BseLI CCNNNNNNNGG 5 cut(s) 256, 291, 540, 693, 1471
BseMI GCAATG 1 cut(s) 978
BseMII CTCAG 2 cut(s) 627, 1115
BseNI ACTGG 2 cut(s) 911, 1108
BseRI GAGGAG 2 cut(s) 62, 560
BseXI GCAGC 2 cut(s) 70, 814
BseYI CCCAGC 1 cut(s) 826
Bsh1236I CGCG 1 cut(s) 7
Bsh1285I CGRYCG 1 cut(s) 216
BshFI GGCC 4 cut(s) 337, 851, 1493, 1599
BshNI GGYRCC 2 cut(s) 139, 1514
BsiEI CGRYCG 1 cut(s) 216
BsiSI CCGG 5 cut(s) 104, 143, 817, 1094, 1593
BslFI GGGAC 1 cut(s) 756
BslI CCNNNNNNNGG 5 cut(s) 256, 291, 540, 693, 1471
BsmAI GTCTC 5 cut(s) 44, 235, 319, 1120, 1335
BsmBI CGTCTC 1 cut(s) 1335
BsmFI GGGAC 1 cut(s) 756
BsmI GAATGC 3 cut(s) 152, 395, 1349
BsnI GGCC 4 cut(s) 337, 851, 1493, 1599
Bso31I GGTCTC 2 cut(s) 235, 1120
Bsp119I TTCGAA 1 cut(s) 618
Bsp1286I GDGCHC 1 cut(s) 1486
Bsp143I GATC 9 cut(s) 74, 213, 340, 352, 646, 822, 880, 1176, 1326
Bsp19I CCATGG 2 cut(s) 539, 1544
BspACI CCGC 5 cut(s) 333, 735, 860, 1024, 1282
BspANI GGCC 4 cut(s) 337, 851, 1493, 1599
BspCNI CTCAG 2 cut(s) 628, 1116
BspFNI CGCG 1 cut(s) 7
BspLI GGNNCC 3 cut(s) 141, 648, 1516
BspPI GGATC 3 cut(s) 641, 654, 817
BspT104I TTCGAA 1 cut(s) 618
BspT107I GGYRCC 2 cut(s) 139, 1514
BspTNI GGTCTC 2 cut(s) 235, 1120
BsrBI CCGCTC 1 cut(s) 862
BsrDI GCAATG 1 cut(s) 978
BsrI ACTGG 2 cut(s) 911, 1108
BssECI CCNNGG 6 cut(s) 160, 250, 539, 692, 1485, 1544
BssMI GATC 9 cut(s) 74, 213, 340, 352, 646, 822, 880, 1176, 1326
BssNI GRCGYC 2 cut(s) 411, 1344
BssT1I CCWWGG 3 cut(s) 539, 692, 1544
Bst2UI CCWGG 3 cut(s) 162, 848, 1487
Bst4CI ACNGT 6 cut(s) 28, 55, 843, 1240, 1606, 1650
Bst6I CTCTTC 1 cut(s) 1074
BstACI GRCGYC 2 cut(s) 411, 1344
BstBI TTCGAA 1 cut(s) 618
BstC8I GCNNGC 1 cut(s) 335
BstDEI CTNAG 5 cut(s) 347, 636, 899, 1124, 1171
BstDSI CCRYGG 3 cut(s) 250, 539, 1544
BstENI CCTNNNNNAGG 1 cut(s) 691
BstF5I GGATG 5 cut(s) 464, 703, 1090, 1203, 1575
BstFNI CGCG 1 cut(s) 7
BstHHI GCGC 1 cut(s) 7
BstKTI GATC 9 cut(s) 77, 216, 343, 355, 649, 825, 883, 1179, 1329
BstMAI GTCTC 5 cut(s) 44, 235, 319, 1120, 1335
BstMBI GATC 9 cut(s) 74, 213, 340, 352, 646, 822, 880, 1176, 1326
BstMCI CGRYCG 1 cut(s) 216
BstMWI GCNNNNNNNGC 4 cut(s) 171, 662, 1290, 1490
BstNI CCWGG 3 cut(s) 162, 848, 1487
BstNSI RCATGY 1 cut(s) 421
BstSCI CCNGG 3 cut(s) 160, 846, 1485
BstSFI CTRYAG 2 cut(s) 78, 760
BstUI CGCG 1 cut(s) 7
BstV1I GCAGC 2 cut(s) 70, 814
BstX2I RGATCY 2 cut(s) 352, 646
BstYI RGATCY 2 cut(s) 352, 646
BsuI GTATCC 1 cut(s) 1016
BsuRI GGCC 4 cut(s) 337, 851, 1493, 1599
BtgI CCRYGG 3 cut(s) 250, 539, 1544
BtsCI GGATG 5 cut(s) 464, 703, 1090, 1203, 1575
BtsI GCAGTG 1 cut(s) 630
BtsIMutI CAGTG 2 cut(s) 60, 630
Cac8I GCNNGC 1 cut(s) 335
CaiI CAGNNNCTG 2 cut(s) 768, 805
CfoI GCGC 1 cut(s) 7
Cfr13I GGNCC 4 cut(s) 239, 335, 1096, 1548
Csp6I GTAC 6 cut(s) 9, 140, 368, 904, 1273, 1515
CviAII CATG 4 cut(s) 329, 418, 540, 1545
CviQI GTAC 6 cut(s) 9, 140, 368, 904, 1273, 1515
DdeI CTNAG 5 cut(s) 347, 636, 899, 1124, 1171
DpnI GATC 9 cut(s) 76, 215, 342, 354, 648, 824, 882, 1178, 1328
DpnII GATC 9 cut(s) 74, 213, 340, 352, 646, 822, 880, 1176, 1326
Eam1104I CTCTTC 1 cut(s) 1074
EarI CTCTTC 1 cut(s) 1074
EciI GGCGGA 1 cut(s) 1271
Eco130I CCWWGG 3 cut(s) 539, 692, 1544
Eco147I AGGCCT 1 cut(s) 1493
Eco24I GRGCYC 1 cut(s) 1486
Eco31I GGTCTC 2 cut(s) 235, 1120
Eco47I GGWCC 3 cut(s) 239, 1096, 1548
Eco57I CTGAAG 2 cut(s) 1098, 1383
EcoNI CCTNNNNNAGG 1 cut(s) 691
EcoRI GAATTC 1 cut(s) 1475
EcoRII CCWGG 3 cut(s) 160, 846, 1485
EcoT14I CCWWGG 3 cut(s) 539, 692, 1544
EcoT22I ATGCAT 1 cut(s) 154
EcoT38I GRGCYC 1 cut(s) 1486
ErhI CCWWGG 3 cut(s) 539, 692, 1544
Esp3I CGTCTC 1 cut(s) 1335
FaeI CATG 4 cut(s) 332, 421, 543, 1548
FaqI GGGAC 1 cut(s) 756
FatI CATG 4 cut(s) 328, 417, 539, 1544
FauI CCCGC 1 cut(s) 326
FbaI TGATCA 1 cut(s) 1326
FblI GTMKAC 3 cut(s) 100, 895, 1112
Fnu4HI GCNGC 2 cut(s) 84, 803
FokI GGATG 5 cut(s) 471, 710, 1077, 1190, 1562
FriOI GRGCYC 1 cut(s) 1486
Fsp4HI GCNGC 2 cut(s) 84, 803
FspBI CTAG 7 cut(s) 561, 653, 693, 719, 1256, 1338, 1377
GlaI GCGC 1 cut(s) 6
GluI GCNGC 2 cut(s) 84, 803
GsaI CCCAGC 1 cut(s) 830
GsuI CTGGAG 2 cut(s) 928, 1508
HaeIII GGCC 4 cut(s) 337, 851, 1493, 1599
HapII CCGG 5 cut(s) 104, 143, 817, 1094, 1593
HhaI GCGC 1 cut(s) 7
Hin1I GRCGYC 2 cut(s) 411, 1344
Hin1II CATG 4 cut(s) 332, 421, 543, 1548
Hin6I GCGC 1 cut(s) 5
HinP1I GCGC 1 cut(s) 5
HindIII AAGCTT 2 cut(s) 575, 943
HinfI GANTC 3 cut(s) 547, 888, 993
HpaII CCGG 5 cut(s) 104, 143, 817, 1094, 1593
HphI GGTGA 7 cut(s) 29, 70, 875, 1222, 1288, 1326, 1582
Hpy166II GTNNAC 4 cut(s) 101, 415, 896, 1113
Hpy188I TCNGA 5 cut(s) 239, 1078, 1187, 1326, 1481
Hpy188III TCNNGA 4 cut(s) 168, 221, 315, 1315
Hpy8I GTNNAC 4 cut(s) 101, 415, 896, 1113
Hpy99I CGWCG 1 cut(s) 1349
HpyAV CCTTC 5 cut(s) 862, 1321, 1358, 1561, 1589
HpyCH4III ACNGT 6 cut(s) 28, 55, 843, 1240, 1606, 1650
HpyCH4IV ACGT 2 cut(s) 411, 1344
HpyCH4V TGCA 3 cut(s) 152, 983, 1046
HpyF10VI GCNNNNNNNGC 4 cut(s) 171, 662, 1290, 1490
HpyF3I CTNAG 5 cut(s) 347, 636, 899, 1124, 1171
HpySE526I ACGT 2 cut(s) 411, 1344
Hsp92I GRCGYC 2 cut(s) 411, 1344
Hsp92II CATG 4 cut(s) 332, 421, 543, 1548
HspAI GCGC 1 cut(s) 5
KpnI GGTACC 2 cut(s) 143, 1518
Ksp22I TGATCA 1 cut(s) 1326
Kzo9I GATC 9 cut(s) 74, 213, 340, 352, 646, 822, 880, 1176, 1326
LmnI GCTCC 6 cut(s) 223, 287, 867, 909, 975, 1029
Lsp1109I GCAGC 2 cut(s) 70, 814
LweI GCATC 2 cut(s) 139, 449
MaeI CTAG 7 cut(s) 561, 653, 693, 719, 1256, 1338, 1377
MaeII ACGT 2 cut(s) 411, 1344
MaeIII GTNAC 6 cut(s) 261, 563, 622, 807, 1286, 1379
MalI GATC 9 cut(s) 76, 215, 342, 354, 648, 824, 882, 1178, 1328
MbiI CCGCTC 1 cut(s) 862
MboI GATC 9 cut(s) 74, 213, 340, 352, 646, 822, 880, 1176, 1326
MboII GAAGA 6 cut(s) 158, 512, 620, 667, 890, 1091
MflI RGATCY 2 cut(s) 352, 646
MhlI GDGCHC 1 cut(s) 1486
MluCI AATT 9 cut(s) 272, 374, 552, 611, 984, 1180, 1330, 1421, 1475
MlyI GAGTC 2 cut(s) 897, 987
Mph1103I ATGCAT 1 cut(s) 154
MroXI GAANNNNTTC 2 cut(s) 674, 1434
MseI TTAA 5 cut(s) 300, 711, 935, 989, 1146
MspA1I CMGCKG 2 cut(s) 268, 805
MspI CCGG 5 cut(s) 104, 143, 817, 1094, 1593
MspR9I CCNGG 3 cut(s) 162, 848, 1487
Mva1269I GAATGC 3 cut(s) 152, 395, 1349
MvaI CCWGG 3 cut(s) 162, 848, 1487
MvnI CGCG 1 cut(s) 7
MwoI GCNNNNNNNGC 4 cut(s) 171, 662, 1290, 1490
NcoI CCATGG 2 cut(s) 539, 1544
NdeII GATC 9 cut(s) 74, 213, 340, 352, 646, 822, 880, 1176, 1326
NlaIII CATG 4 cut(s) 332, 421, 543, 1548
NlaIV GGNNCC 3 cut(s) 141, 648, 1516
NmuCI GTSAC 2 cut(s) 563, 807
NsiI ATGCAT 1 cut(s) 154
NspI RCATGY 1 cut(s) 421
NspV TTCGAA 1 cut(s) 618
PceI AGGCCT 1 cut(s) 1493
PciI ACATGT 1 cut(s) 417
PctI GAATGC 3 cut(s) 152, 395, 1349
PdmI GAANNNNTTC 2 cut(s) 674, 1434
PfeI GAWTC 1 cut(s) 547
PflMI CCANNNNNTGG 2 cut(s) 291, 540
PkrI GCNGC 2 cut(s) 85, 804
Ple19I CGATCG 1 cut(s) 216
PleI GAGTC 2 cut(s) 896, 987
PpsI GAGTC 2 cut(s) 896, 987
PscI ACATGT 1 cut(s) 417
PsiI TTATAA 1 cut(s) 1500
Psp6I CCWGG 3 cut(s) 160, 846, 1485
PspFI CCCAGC 1 cut(s) 826
PspGI CCWGG 3 cut(s) 160, 846, 1485
PspN4I GGNNCC 3 cut(s) 141, 648, 1516
PspPI GGNCC 4 cut(s) 239, 335, 1096, 1548
PstNI CAGNNNCTG 2 cut(s) 768, 805
PsuI RGATCY 2 cut(s) 352, 646
PvuI CGATCG 1 cut(s) 216
PvuII CAGCTG 2 cut(s) 268, 805
RgaI GCGATCGC 1 cut(s) 216
RsaI GTAC 6 cut(s) 10, 141, 369, 905, 1274, 1516
RsaNI GTAC 6 cut(s) 9, 140, 368, 904, 1273, 1515
SaqAI TTAA 5 cut(s) 300, 711, 935, 989, 1146
SatI GCNGC 2 cut(s) 84, 803
Sau3AI GATC 9 cut(s) 74, 213, 340, 352, 646, 822, 880, 1176, 1326
Sau96I GGNCC 4 cut(s) 239, 335, 1096, 1548
SchI GAGTC 2 cut(s) 897, 987
ScrFI CCNGG 3 cut(s) 162, 848, 1487
SduI GDGCHC 1 cut(s) 1486
SfaAI GCGATCGC 1 cut(s) 216
SfaNI GCATC 2 cut(s) 139, 449
SfcI CTRYAG 2 cut(s) 78, 760
SfuI TTCGAA 1 cut(s) 618
SgfI GCGATCGC 1 cut(s) 216
SinI GGWCC 3 cut(s) 239, 1096, 1548
SmlI CTYRAG 3 cut(s) 166, 572, 1315
SmoI CTYRAG 3 cut(s) 166, 572, 1315
SpeI ACTAGT 1 cut(s) 560
Sse9I AATT 9 cut(s) 272, 374, 552, 611, 984, 1180, 1330, 1421, 1475
SseBI AGGCCT 1 cut(s) 1493
SsiI CCGC 5 cut(s) 333, 735, 860, 1024, 1282
SspMI CTAG 7 cut(s) 561, 653, 693, 719, 1256, 1338, 1377
StuI AGGCCT 1 cut(s) 1493
StyD4I CCNGG 3 cut(s) 160, 846, 1485
StyI CCWWGG 3 cut(s) 539, 692, 1544
TaaI ACNGT 6 cut(s) 28, 55, 843, 1240, 1606, 1650
TaiI ACGT 2 cut(s) 414, 1347
TaqI TCGA 7 cut(s) 316, 438, 481, 516, 618, 778, 1629
TaqII GACCGA 1 cut(s) 87
TasI AATT 9 cut(s) 272, 374, 552, 611, 984, 1180, 1330, 1421, 1475
TfiI GAWTC 1 cut(s) 547
Tru1I TTAA 5 cut(s) 300, 711, 935, 989, 1146
Tru9I TTAA 5 cut(s) 300, 711, 935, 989, 1146
TscAI CASTG 2 cut(s) 60, 637
TseFI GTSAC 2 cut(s) 563, 807
TseI GCWGC 2 cut(s) 83, 802
Tsp45I GTSAC 2 cut(s) 563, 807
TspDTI ATGAA 5 cut(s) 513, 717, 1278, 1427, 1543
TspGWI ACGGA 1 cut(s) 267
TspRI CASTG 2 cut(s) 60, 637
Van91I CCANNNNNTGG 2 cut(s) 291, 540
VpaK11BI GGWCC 3 cut(s) 239, 1096, 1548
XagI CCTNNNNNAGG 1 cut(s) 691
XapI RAATTY 2 cut(s) 272, 1475
XceI RCATGY 1 cut(s) 421
XmaJI CCTAGG 1 cut(s) 692
XmiI GTMKAC 3 cut(s) 100, 895, 1112
XmnI GAANNNNTTC 2 cut(s) 674, 1434
XspI CTAG 7 cut(s) 561, 653, 693, 719, 1256, 1338, 1377
ZraI GACGTC 2 cut(s) 412, 1345
Zsp2I ATGCAT 1 cut(s) 154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.