Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD00G1181600.v1.1 |
| pyrus_communis | pycom14g16560 |
| rosa_chinensis | RchiOBHm_Chr1g0328861 RchiOBHm_Chr1g0329111 RchiOBHm_Chr3g0457841 RchiOBHm_Chr4g0386501 RchiOBHm_Chr4g0388071 RchiOBHm_Chr4g0394521 |
| rosa_laevigata | RLG00000010088 RLG00000023351 RLG00000023354 |
| rosa_multiflora | Rmu_co7995176.1_g000001 Rmu_sc0001942.1_g000035 Rmu_sc0006648.1_g000002 Rmu_sc0008380.1_g000004 Rmu_sc0014755.1_g000005 |
| rosa_roxburghii | Rroxscaffold_5G00333990 Rroxscaffold_5G00334610 |
| rosa_rugosa | Rorug03G0307400 Rorug03G0307700 Rorug03G0364900.1 |
| rosa_samantha | Rh4BG050700 Rh4DG010700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 15 |
| AccB1I | GGYRCC | 1 cut(s) | 15 |
| AclWI | GGATC | 2 cut(s) | 17, 30 |
| AfaI | GTAC | 1 cut(s) | 17 |
| AgsI | TTSAA | 1 cut(s) | 37 |
| AlwI | GGATC | 2 cut(s) | 17, 30 |
| Asp718I | GGTACC | 1 cut(s) | 15 |
| AsuC2I | CCSGG | 1 cut(s) | 20 |
| AsuHPI | GGTGA | 1 cut(s) | 74 |
| BamHI | GGATCC | 1 cut(s) | 22 |
| BanI | GGYRCC | 1 cut(s) | 15 |
| BcnI | CCSGG | 1 cut(s) | 20 |
| Bme1390I | CCNGG | 1 cut(s) | 20 |
| BmiI | GGNNCC | 2 cut(s) | 17, 24 |
| BmrFI | CCNGG | 1 cut(s) | 20 |
| BmsI | GCATC | 1 cut(s) | 124 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 38, 70 |
| BpuMI | CCSGG | 1 cut(s) | 20 |
| BsaWI | WCCGGW | 1 cut(s) | 56 |
| Bse3DI | GCAATG | 1 cut(s) | 93 |
| BseMI | GCAATG | 1 cut(s) | 93 |
| BshNI | GGYRCC | 1 cut(s) | 15 |
| BsiSI | CCGG | 2 cut(s) | 20, 57 |
| Bsp143I | GATC | 1 cut(s) | 22 |
| BspLI | GGNNCC | 2 cut(s) | 17, 24 |
| BspPI | GGATC | 2 cut(s) | 17, 30 |
| BspQI | GCTCTTC | 1 cut(s) | 80 |
| BspT107I | GGYRCC | 1 cut(s) | 15 |
| BsrDI | GCAATG | 1 cut(s) | 93 |
| BssMI | GATC | 1 cut(s) | 22 |
| Bst6I | CTCTTC | 1 cut(s) | 80 |
| BstKTI | GATC | 1 cut(s) | 25 |
| BstMBI | GATC | 1 cut(s) | 22 |
| BstSCI | CCNGG | 1 cut(s) | 18 |
| BstX2I | RGATCY | 1 cut(s) | 22 |
| BstYI | RGATCY | 1 cut(s) | 22 |
| Csp6I | GTAC | 1 cut(s) | 16 |
| CviJI | RGCY | 1 cut(s) | 90 |
| CviKI_1 | RGCY | 1 cut(s) | 90 |
| CviQI | GTAC | 1 cut(s) | 16 |
| DpnI | GATC | 1 cut(s) | 24 |
| DpnII | GATC | 1 cut(s) | 22 |
| Eam1104I | CTCTTC | 1 cut(s) | 80 |
| EarI | CTCTTC | 1 cut(s) | 80 |
| HapII | CCGG | 2 cut(s) | 20, 57 |
| HinfI | GANTC | 1 cut(s) | 6 |
| HpaII | CCGG | 2 cut(s) | 20, 57 |
| HphI | GGTGA | 1 cut(s) | 74 |
| Hpy188I | TCNGA | 1 cut(s) | 11 |
| Hpy188III | TCNNGA | 2 cut(s) | 26, 149 |
| HpyAV | CCTTC | 2 cut(s) | 6, 178 |
| HpyCH4V | TGCA | 1 cut(s) | 109 |
| KpnI | GGTACC | 1 cut(s) | 19 |
| Kzo9I | GATC | 1 cut(s) | 22 |
| LguI | GCTCTTC | 1 cut(s) | 80 |
| LpnPI | CCDG | 6 cut(s) | 33, 39, 70, 123, 162, 179 |
| LweI | GCATC | 1 cut(s) | 124 |
| MaeIII | GTNAC | 1 cut(s) | 140 |
| MalI | GATC | 1 cut(s) | 24 |
| MboI | GATC | 1 cut(s) | 22 |
| MboII | GAAGA | 1 cut(s) | 97 |
| MflI | RGATCY | 1 cut(s) | 22 |
| MnlI | CCTC | 1 cut(s) | 64 |
| MseI | TTAA | 1 cut(s) | 41 |
| MslI | CAYNNNNRTG | 1 cut(s) | 132 |
| MspI | CCGG | 2 cut(s) | 20, 57 |
| MspR9I | CCNGG | 1 cut(s) | 20 |
| NciI | CCSGG | 1 cut(s) | 20 |
| NdeII | GATC | 1 cut(s) | 22 |
| NlaIV | GGNNCC | 2 cut(s) | 17, 24 |
| NmuCI | GTSAC | 1 cut(s) | 140 |
| PciSI | GCTCTTC | 1 cut(s) | 80 |
| PfeI | GAWTC | 1 cut(s) | 6 |
| PflFI | GACNNNGTC | 1 cut(s) | 161 |
| PspN4I | GGNNCC | 2 cut(s) | 17, 24 |
| PsuI | RGATCY | 1 cut(s) | 22 |
| PsyI | GACNNNGTC | 1 cut(s) | 161 |
| RsaI | GTAC | 1 cut(s) | 17 |
| RsaNI | GTAC | 1 cut(s) | 16 |
| RseI | CAYNNNNRTG | 1 cut(s) | 132 |
| SapI | GCTCTTC | 1 cut(s) | 80 |
| SaqAI | TTAA | 1 cut(s) | 41 |
| Sau3AI | GATC | 1 cut(s) | 22 |
| ScrFI | CCNGG | 1 cut(s) | 20 |
| SetI | ASST | 1 cut(s) | 17 |
| SfaNI | GCATC | 1 cut(s) | 124 |
| SgeI | CNNG | 9 cut(s) | 31, 32, 38, 69, 122, 150, 161, 178, 182 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 132 |
| StyD4I | CCNGG | 1 cut(s) | 18 |
| TfiI | GAWTC | 1 cut(s) | 6 |
| Tru1I | TTAA | 1 cut(s) | 41 |
| Tru9I | TTAA | 1 cut(s) | 41 |
| TseFI | GTSAC | 1 cut(s) | 140 |
| Tsp45I | GTSAC | 1 cut(s) | 140 |
| Tth111I | GACNNNGTC | 1 cut(s) | 161 |