Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD00G1181600.v1.1 |
| pyrus_communis | pycom14g16560 |
| rosa_chinensis | RchiOBHm_Chr1g0328861 RchiOBHm_Chr1g0329111 RchiOBHm_Chr3g0457841 RchiOBHm_Chr4g0386501 RchiOBHm_Chr4g0388071 RchiOBHm_Chr4g0394521 |
| rosa_laevigata | RLG00000010088 RLG00000023351 RLG00000023354 |
| rosa_multiflora | Rmu_co7995176.1_g000001 Rmu_sc0001942.1_g000035 Rmu_sc0006648.1_g000002 Rmu_sc0008380.1_g000004 Rmu_sc0014755.1_g000005 |
| rosa_roxburghii | Rroxscaffold_5G00333990 Rroxscaffold_5G00334610 |
| rosa_rugosa | Rorug03G0307400 Rorug03G0307700 Rorug03G0364900.1 |
| rosa_samantha | Rh4BG050700 Rh4DG010700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 2 cut(s) | 143, 183 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 167 |
| AgsI | TTSAA | 1 cut(s) | 70 |
| AluBI | AGCT | 1 cut(s) | 167 |
| AluI | AGCT | 1 cut(s) | 167 |
| ApeKI | GCWGC | 1 cut(s) | 8 |
| AsuC2I | CCSGG | 1 cut(s) | 13 |
| AsuHPI | GGTGA | 2 cut(s) | 43, 176 |
| BccI | CCATC | 3 cut(s) | 31, 153, 234 |
| BcnI | CCSGG | 1 cut(s) | 13 |
| BfaI | CTAG | 1 cut(s) | 188 |
| BisI | GCNGC | 1 cut(s) | 9 |
| BlsI | GCNGC | 1 cut(s) | 10 |
| Bme1390I | CCNGG | 1 cut(s) | 13 |
| BmrFI | CCNGG | 1 cut(s) | 13 |
| BmsI | GCATC | 1 cut(s) | 64 |
| BpuMI | CCSGG | 1 cut(s) | 13 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 82, 112 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 167 |
| BseGI | GGATG | 2 cut(s) | 79, 226 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 167 |
| BsgI | GTGCAG | 1 cut(s) | 81 |
| BsiSI | CCGG | 1 cut(s) | 12 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 167 |
| Bst4CI | ACNGT | 1 cut(s) | 178 |
| Bst6I | CTCTTC | 1 cut(s) | 119 |
| BstF5I | GGATG | 2 cut(s) | 79, 226 |
| BstSCI | CCNGG | 1 cut(s) | 11 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 203 |
| BtsCI | GGATG | 2 cut(s) | 79, 226 |
| CseI | GACGC | 1 cut(s) | 34 |
| CviJI | RGCY | 5 cut(s) | 8, 22, 152, 160, 167 |
| CviKI_1 | RGCY | 5 cut(s) | 8, 22, 152, 160, 167 |
| Eam1104I | CTCTTC | 1 cut(s) | 119 |
| EarI | CTCTTC | 1 cut(s) | 119 |
| Eco32I | GATATC | 1 cut(s) | 209 |
| Eco57I | CTGAAG | 2 cut(s) | 143, 183 |
| EcoRV | GATATC | 1 cut(s) | 209 |
| FaiI | YATR | 5 cut(s) | 134, 140, 193, 201, 221 |
| Fnu4HI | GCNGC | 1 cut(s) | 9 |
| FokI | GGATG | 2 cut(s) | 86, 213 |
| Fsp4HI | GCNGC | 1 cut(s) | 9 |
| FspBI | CTAG | 1 cut(s) | 188 |
| GluI | GCNGC | 1 cut(s) | 9 |
| HapII | CCGG | 1 cut(s) | 12 |
| HgaI | GACGC | 1 cut(s) | 34 |
| HinfI | GANTC | 1 cut(s) | 113 |
| HpaII | CCGG | 1 cut(s) | 12 |
| HphI | GGTGA | 2 cut(s) | 43, 176 |
| Hpy166II | GTNNAC | 1 cut(s) | 184 |
| Hpy188I | TCNGA | 1 cut(s) | 118 |
| Hpy8I | GTNNAC | 1 cut(s) | 184 |
| HpyAV | CCTTC | 1 cut(s) | 64 |
| HpyCH4III | ACNGT | 1 cut(s) | 178 |
| HpyCH4V | TGCA | 1 cut(s) | 62 |
| LpnPI | CCDG | 4 cut(s) | 25, 134, 153, 174 |
| LweI | GCATC | 1 cut(s) | 64 |
| MaeI | CTAG | 1 cut(s) | 188 |
| MaeIII | GTNAC | 1 cut(s) | 31 |
| MboII | GAAGA | 1 cut(s) | 136 |
| MluCI | AATT | 1 cut(s) | 25 |
| MlyI | GAGTC | 1 cut(s) | 122 |
| MnlI | CCTC | 1 cut(s) | 84 |
| MseI | TTAA | 1 cut(s) | 18 |
| MspI | CCGG | 1 cut(s) | 12 |
| MspR9I | CCNGG | 1 cut(s) | 13 |
| NciI | CCSGG | 1 cut(s) | 13 |
| NmuCI | GTSAC | 1 cut(s) | 31 |
| PkrI | GCNGC | 1 cut(s) | 10 |
| PleI | GAGTC | 1 cut(s) | 121 |
| PpsI | GAGTC | 1 cut(s) | 121 |
| SaqAI | TTAA | 1 cut(s) | 18 |
| SatI | GCNGC | 1 cut(s) | 9 |
| SchI | GAGTC | 1 cut(s) | 122 |
| ScrFI | CCNGG | 1 cut(s) | 13 |
| SetI | ASST | 3 cut(s) | 123, 169, 189 |
| SfaNI | GCATC | 1 cut(s) | 64 |
| SgeI | CNNG | 8 cut(s) | 24, 25, 69, 133, 161, 173, 180, 200 |
| Sse9I | AATT | 1 cut(s) | 25 |
| SspMI | CTAG | 1 cut(s) | 188 |
| StyD4I | CCNGG | 1 cut(s) | 11 |
| TaaI | ACNGT | 1 cut(s) | 178 |
| TasI | AATT | 1 cut(s) | 25 |
| Tru1I | TTAA | 1 cut(s) | 18 |
| Tru9I | TTAA | 1 cut(s) | 18 |
| TseFI | GTSAC | 1 cut(s) | 31 |
| TseI | GCWGC | 1 cut(s) | 8 |
| Tsp45I | GTSAC | 1 cut(s) | 31 |
| TspDTI | ATGAA | 1 cut(s) | 155 |
| XspI | CTAG | 1 cut(s) | 188 |