Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD00G1181600.v1.1 |
| pyrus_communis | pycom14g16560 |
| rosa_chinensis | RchiOBHm_Chr1g0328861 RchiOBHm_Chr1g0329111 RchiOBHm_Chr3g0457841 RchiOBHm_Chr4g0386501 RchiOBHm_Chr4g0388071 RchiOBHm_Chr4g0394521 |
| rosa_laevigata | RLG00000010088 RLG00000023351 RLG00000023354 |
| rosa_multiflora | Rmu_co7995176.1_g000001 Rmu_sc0001942.1_g000035 Rmu_sc0006648.1_g000002 Rmu_sc0008380.1_g000004 Rmu_sc0014755.1_g000005 |
| rosa_roxburghii | Rroxscaffold_5G00333990 Rroxscaffold_5G00334610 |
| rosa_rugosa | Rorug03G0307400 Rorug03G0307700 Rorug03G0364900.1 |
| rosa_samantha | Rh4BG050700 Rh4DG010700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 169 |
| AcoI | YGGCCR | 1 cut(s) | 186 |
| AfaI | GTAC | 1 cut(s) | 158 |
| AoxI | GGCC | 1 cut(s) | 186 |
| AsuHPI | GGTGA | 1 cut(s) | 230 |
| BalI | TGGCCA | 1 cut(s) | 188 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 140, 172 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 194 |
| BmcAI | AGTACT | 1 cut(s) | 158 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 27 |
| BsaWI | WCCGGW | 1 cut(s) | 13 |
| BseMII | CTCAG | 3 cut(s) | 103, 178, 219 |
| BshFI | GGCC | 1 cut(s) | 188 |
| BsiSI | CCGG | 1 cut(s) | 14 |
| BsnI | GGCC | 1 cut(s) | 188 |
| BspANI | GGCC | 1 cut(s) | 188 |
| BspCNI | CTCAG | 3 cut(s) | 102, 177, 220 |
| BspQI | GCTCTTC | 1 cut(s) | 41 |
| Bst6I | CTCTTC | 1 cut(s) | 41 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 203 |
| BstDEI | CTNAG | 3 cut(s) | 89, 164, 228 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 194, 203 |
| BsuRI | GGCC | 1 cut(s) | 188 |
| Csp6I | GTAC | 1 cut(s) | 157 |
| CviAII | CATG | 1 cut(s) | 215 |
| CviJI | RGCY | 2 cut(s) | 51, 188 |
| CviKI_1 | RGCY | 2 cut(s) | 51, 188 |
| CviQI | GTAC | 1 cut(s) | 157 |
| DdeI | CTNAG | 3 cut(s) | 89, 164, 228 |
| EaeI | YGGCCR | 1 cut(s) | 186 |
| Eam1104I | CTCTTC | 1 cut(s) | 41 |
| EarI | CTCTTC | 1 cut(s) | 41 |
| FaeI | CATG | 1 cut(s) | 218 |
| FaiI | YATR | 3 cut(s) | 54, 174, 216 |
| FatI | CATG | 1 cut(s) | 214 |
| FblI | GTMKAC | 1 cut(s) | 169 |
| HaeIII | GGCC | 1 cut(s) | 188 |
| HapII | CCGG | 1 cut(s) | 14 |
| Hin1II | CATG | 1 cut(s) | 218 |
| HincII | GTYRAC | 1 cut(s) | 170 |
| HindII | GTYRAC | 1 cut(s) | 170 |
| HinfI | GANTC | 2 cut(s) | 87, 224 |
| HpaII | CCGG | 1 cut(s) | 14 |
| HphI | GGTGA | 1 cut(s) | 230 |
| Hpy166II | GTNNAC | 2 cut(s) | 8, 170 |
| Hpy188I | TCNGA | 2 cut(s) | 92, 229 |
| Hpy188III | TCNNGA | 1 cut(s) | 110 |
| Hpy8I | GTNNAC | 2 cut(s) | 8, 170 |
| HpyCH4IV | ACGT | 1 cut(s) | 105 |
| HpyCH4V | TGCA | 3 cut(s) | 59, 70, 214 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 194, 203 |
| HpyF3I | CTNAG | 3 cut(s) | 89, 164, 228 |
| HpySE526I | ACGT | 1 cut(s) | 105 |
| Hsp92II | CATG | 1 cut(s) | 218 |
| LguI | GCTCTTC | 1 cut(s) | 41 |
| LpnPI | CCDG | 2 cut(s) | 27, 123 |
| MaeII | ACGT | 1 cut(s) | 105 |
| MaeIII | GTNAC | 1 cut(s) | 101 |
| MboII | GAAGA | 4 cut(s) | 58, 157, 160, 233 |
| MlsI | TGGCCA | 1 cut(s) | 188 |
| MluCI | AATT | 1 cut(s) | 208 |
| MluNI | TGGCCA | 1 cut(s) | 188 |
| MlyI | GAGTC | 1 cut(s) | 81 |
| MnlI | CCTC | 3 cut(s) | 21, 137, 186 |
| Mox20I | TGGCCA | 1 cut(s) | 188 |
| MscI | TGGCCA | 1 cut(s) | 188 |
| Msp20I | TGGCCA | 1 cut(s) | 188 |
| MspI | CCGG | 1 cut(s) | 14 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 194, 203 |
| NlaIII | CATG | 1 cut(s) | 218 |
| NmuCI | GTSAC | 1 cut(s) | 101 |
| PciSI | GCTCTTC | 1 cut(s) | 41 |
| PfeI | GAWTC | 1 cut(s) | 224 |
| PflFI | GACNNNGTC | 1 cut(s) | 122 |
| PleI | GAGTC | 1 cut(s) | 81 |
| PpsI | GAGTC | 1 cut(s) | 81 |
| PsyI | GACNNNGTC | 1 cut(s) | 122 |
| RsaI | GTAC | 1 cut(s) | 158 |
| RsaNI | GTAC | 1 cut(s) | 157 |
| SalI | GTCGAC | 1 cut(s) | 168 |
| SapI | GCTCTTC | 1 cut(s) | 41 |
| ScaI | AGTACT | 1 cut(s) | 158 |
| SchI | GAGTC | 1 cut(s) | 81 |
| SetI | ASST | 3 cut(s) | 13, 108, 203 |
| SgeI | CNNG | 9 cut(s) | 26, 83, 116, 122, 143, 172, 202, 210, 227 |
| Sse9I | AATT | 1 cut(s) | 208 |
| TaiI | ACGT | 1 cut(s) | 108 |
| TaqI | TCGA | 1 cut(s) | 169 |
| TasI | AATT | 1 cut(s) | 208 |
| TatI | WGTACW | 1 cut(s) | 156 |
| TfiI | GAWTC | 1 cut(s) | 224 |
| TseFI | GTSAC | 1 cut(s) | 101 |
| Tsp45I | GTSAC | 1 cut(s) | 101 |
| Tth111I | GACNNNGTC | 1 cut(s) | 122 |
| XmiI | GTMKAC | 1 cut(s) | 169 |
| ZrmI | AGTACT | 1 cut(s) | 158 |