Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002156

Physical Location & Seq

Genomic Coordinates Reverse (-)

32637351 .. 32641280

Gene Structure 3930 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0307400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1491 bp

ATGGCTCTGAAGCTTCTGCTTTTACTTTTAGCTATTTCAGTAGCTACTGCTGATGAAGATGTATTTATTGGTGTGAATATAGGAACATCCCTCTCCGAAATGCCACACCCAACTCAAGTAGTAGCGCTTTTAAAAGCCCAGCAAATTCGACATGTCCGGTTATATGATGCAGATCGTGCAATGCTTGTGGCACTTGCAAATACAGGCATAAAAGTCATTATTTCTGTGCCTAATGATCAGATCCTTGGAATTGGTCAATCTAATTCCACTGCAGCTAATTGGGTATCCCAGAATGTAGTAGCACATTACCCAGCTACAAACATCACAGCCATATCTGTTGGCTCAGAGGTCCTTACTGCCCTCCCAAATGCTGCAAAAATCCTCGTCAGTGCACTCAAGTACATTCACTCAGCCCTTGTGGCTTCCAATCTTGACAGCCAAATCAAAGTTTCTACTCCTCTTTCTTCCTCTATAATCCTTGATTCATTCCCACCTTCCCAAGCCTTCTTTAACCGCTCACTGAATCCAGTTTTGGTCCCCATGCTTAGTTTCTTGCAGTCCACGGGCTCGTTTCTGATGCTTAATGTATACCCATACTATGACTACATGCAATCAAATGGTGTTATTGCATTGGATTATGCACTGCTCAACCCTCTCCAGGCAAACAAAGAAGCTGTTGATTCCAATACGCTTCTCCATTATTCTAATGTTTTTGATGCTGTGGTTGATGCAGCATATTATGCCATGGCTTTTCTTAACTTCACCAATGTTCCAGTAGTAGTGACAGAATCAGGCTGGCCCTCTAAAGGTGATTCTAATGAGCCAGAAGCAACATTAGAAAATGCGAACACTTACAACAGCAATTTAATAAGGCACGTGTTGAACAAGACTGGAACTCCCAAACATCCTGGACTTGCTGTTAGTACTTTCATTTATGAACTCTATAATGAGGATACAAAACCTGGGCCTGTCTCAGAGAAGAACTGGGGATTGTTTGATGCAAATGGAACACCTATCTACATATTACGGTTGACGGGATCAGGAGCAGTATTAGCAAATGATACTACAAATCAAACTTTCTGTACAGTAAAGGATGGCACTGATACAAAGATGCTTCAGGCTGCACTAGATTGGGCTTGTGGACCTGGCAAGGTGGATTGCTCACCATTATTGCAGGGAGAACCCTGCTATGAACCAGATAATGTGATTTCACACGCAACGTATGCATTTGACACTTATTATCATCAGATGGAGAAGACGCCTGCAGCATGTGACTTCAATGGAGTGGCTGCAATCACCACTACCGATCCAAGCCATGGTTCCTGTATATTTCCAGGAAGTCTTGGCAAGAATGGAACCTTGTTCAACATCACAGCTCCATCTTTGAATTCCACAAGTGCAGATTCTTCTTCTGCTTACAACTTTCACAGCAATGCTTTTGCAAGCATAGTACTCATTCATGTTCTCATCAGCTGTGCAGTTTTCTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

496

Amino Acids

53.19

Weight (kDa)

5.04

Isoelectric Point (pI)

39.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_17	PF00332	23 - 342	1.6e-78	Glycosyl hydrolases family 17
X8	PF07983	360 - 430	3.2e-18	X8 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002156)

Species	Orthologous Gene IDs
malus_domestica	MD04G1086800.v1.1 MD15G1179900.v1.1
rosa_chinensis	RchiOBHm_Chr1g0319101 RchiOBHm_Chr1g0328871 RchiOBHm_Chr1g0329071 RchiOBHm_Chr1g0329121 RchiOBHm_Chr1g0329131 RchiOBHm_Chr3g0482401 RchiOBHm_Chr4g0386521 RchiOBHm_Chr4g0386661 RchiOBHm_Chr4g0386761 RchiOBHm_Chr4g0386771 RchiOBHm_Chr4g0386901 RchiOBHm_Chr4g0387051 RchiOBHm_Chr4g0387251 RchiOBHm_Chr4g0387261 RchiOBHm_Chr4g0389041 RchiOBHm_Chr4g0389121 RchiOBHm_Chr4g0389181 RchiOBHm_Chr4g0389271 RchiOBHm_Chr4g0389371 RchiOBHm_Chr4g0394511
rosa_laevigata	RLG00000009193 RLG00000009989 RLG00000009995 RLG00000010148 RLG00000010150 RLG00000010159
rosa_multiflora	Rmu_co8024538.1_g000001 Rmu_sc0002221.1_g000001 Rmu_sc0005233.1_g000001 Rmu_sc0006648.1_g000009 Rmu_sc0008380.1_g000013 Rmu_sc0018886.1_g000001 Rmu_sc0040950.1_g000001
rosa_roxburghii	Rroxscaffold_5G00335380
rosa_rugosa	Rorug03G0307400 Rorug03G0308300 Rorug03G0322800 Rorug03G0365000.1 Rorug03G0365100.1 Rorug05G0232600
rosa_samantha	Rh4CG016200
rosa_wichuraiana	Rw4G000010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1316
AccBSI	CCGCTC	1 cut(s)	516
AccI	GTMKAC	1 cut(s)	588
AciI	CCGC	1 cut(s)	514
AclWI	GGATC	3 cut(s)	235, 1045, 1301
AcsI	RAATTY	2 cut(s)	144, 1387
AcuI	CTGAAG	2 cut(s)	29, 1100
AcvI	CACGTG	1 cut(s)	877
AcyI	GRCGYC	1 cut(s)	1259
AfaI	GTAC	4 cut(s)	401, 925, 1084, 1452
AfeI	AGCGCT	1 cut(s)	126
AfiI	CCNNNNNNNGG	3 cut(s)	658, 806, 1316
AflIII	ACRYGT	2 cut(s)	151, 876
AgsI	TTSAA	4 cut(s)	883, 1279, 1366, 1387
AjnI	CCWGG	5 cut(s)	657, 907, 961, 1144, 1333
AjuI	GAANNNNNNNTTGG	4 cut(s)	515, 547, 1303, 1335
AluBI	AGCT	8 cut(s)	13, 32, 44, 275, 314, 674, 1376, 1473
AluI	AGCT	8 cut(s)	13, 32, 44, 275, 314, 674, 1376, 1473
Alw21I	GWGCWC	1 cut(s)	394
Alw26I	GTCTC	1 cut(s)	976
Alw44I	GTGCAC	1 cut(s)	390
AlwI	GGATC	3 cut(s)	235, 1045, 1301
Aor51HI	AGCGCT	1 cut(s)	126
AoxI	GGCC	2 cut(s)	797, 965
ApaLI	GTGCAC	1 cut(s)	390
ApeKI	GCWGC	6 cut(s)	272, 371, 731, 1121, 1265, 1289
ApoI	RAATTY	2 cut(s)	144, 1387
AspLEI	GCGC	1 cut(s)	127
AspS9I	GGNCC	5 cut(s)	349, 535, 798, 965, 1142
AsuHPI	GGTGA	4 cut(s)	754, 821, 1155, 1288
AvaII	GGWCC	3 cut(s)	349, 535, 1142
BaeGI	GKGCMC	1 cut(s)	394
BanII	GRGCYC	1 cut(s)	569
BbrPI	CACGTG	1 cut(s)	877
BbsI	GAAGAC	1 cut(s)	1262
Bbv12I	GWGCWC	1 cut(s)	394
BbvI	GCAGC	6 cut(s)	284, 358, 743, 1108, 1276, 1277
BccI	CCATC	3 cut(s)	1088, 1243, 1387
BciT130I	CCWGG	5 cut(s)	659, 909, 963, 1146, 1335
BciVI	GTATCC	2 cut(s)	295, 946
BclI	TGATCA	1 cut(s)	235
BcoDI	GTCTC	1 cut(s)	976
BfaI	CTAG	1 cut(s)	1127
BfmI	CTRYAG	2 cut(s)	270, 1263
BfoI	RGCGCY	1 cut(s)	128
BfuI	GTATCC	2 cut(s)	295, 946
BglI	GCCNNNNNGGC	1 cut(s)	419
BisI	GCNGC	6 cut(s)	273, 372, 732, 1122, 1266, 1290
BlsI	GCNGC	6 cut(s)	274, 373, 733, 1123, 1267, 1291
BmcAI	AGTACT	2 cut(s)	925, 1452
Bme1390I	CCNGG	5 cut(s)	659, 909, 963, 1146, 1335
Bme18I	GGWCC	3 cut(s)	349, 535, 1142
BmgT120I	GGNCC	5 cut(s)	349, 535, 798, 965, 1142
BmiI	GGNNCC	3 cut(s)	537, 1321, 1357
BmrFI	CCNGG	5 cut(s)	659, 909, 963, 1146, 1335
BmrI	ACTGGG	1 cut(s)	994
BmsI	GCATC	6 cut(s)	157, 567, 706, 718, 988, 1101
BmuI	ACTGGG	1 cut(s)	994
BpiI	GAAGAC	1 cut(s)	1262
BpmI	CTGGAG	1 cut(s)	641
BpuEI	CTTGAG	2 cut(s)	99, 380
BsaAI	YACGTR	1 cut(s)	877
BsaBI	GATNNNNATC	1 cut(s)	171
BsaHI	GRCGYC	1 cut(s)	1259
BsaJI	CCNNGG	5 cut(s)	244, 561, 744, 962, 1315
BsaWI	WCCGGW	1 cut(s)	156
BsaXI	ACNNNNNCTCC	2 cut(s)	880, 910
Bsc4I	CCNNNNNNNGG	3 cut(s)	658, 806, 1316
Bse1I	ACTGG	4 cut(s)	527, 773, 895, 989
Bse3DI	GCAATG	2 cut(s)	186, 1438
Bse8I	GATNNNNATC	1 cut(s)	171
BseBI	CCWGG	5 cut(s)	659, 909, 963, 1146, 1335
BseDI	CCNNGG	5 cut(s)	244, 561, 744, 962, 1315
BseGI	GGATG	3 cut(s)	86, 904, 1099
BseJI	GATNNNNATC	1 cut(s)	171
BseLI	CCNNNNNNNGG	3 cut(s)	658, 806, 1316
BseMI	GCAATG	2 cut(s)	186, 1438
BseMII	CTCAG	3 cut(s)	357, 423, 987
BseNI	ACTGG	4 cut(s)	527, 773, 895, 989
BseRI	GAGGAG	1 cut(s)	447
BseSI	GKGCMC	1 cut(s)	394
BseXI	GCAGC	6 cut(s)	284, 358, 743, 1108, 1276, 1277
BseYI	CCCAGC	2 cut(s)	138, 310
BsgI	GTGCAG	2 cut(s)	1107, 1419
BshFI	GGCC	2 cut(s)	799, 967
BsiHKAI	GWGCWC	1 cut(s)	394
BsiSI	CCGG	1 cut(s)	157
BslFI	GGGAC	1 cut(s)	521
BslI	CCNNNNNNNGG	3 cut(s)	658, 806, 1316
BsmAI	GTCTC	1 cut(s)	976
BsmFI	GGGAC	1 cut(s)	521
BsnI	GGCC	2 cut(s)	799, 967
Bsp1286I	GDGCHC	2 cut(s)	394, 569
Bsp1407I	TGTACA	1 cut(s)	1082
Bsp143I	GATC	5 cut(s)	172, 235, 240, 1037, 1306
Bsp19I	CCATGG	2 cut(s)	744, 1315
BspACI	CCGC	1 cut(s)	514
BspANI	GGCC	2 cut(s)	799, 967
BspCNI	CTCAG	3 cut(s)	356, 422, 986
BspLI	GGNNCC	3 cut(s)	537, 1321, 1357
BspMAI	CTGCAG	2 cut(s)	274, 1267
BspPI	GGATC	3 cut(s)	235, 1045, 1301
BsrBI	CCGCTC	1 cut(s)	516
BsrDI	GCAATG	2 cut(s)	186, 1438
BsrGI	TGTACA	1 cut(s)	1082
BsrI	ACTGG	4 cut(s)	527, 773, 895, 989
BssECI	CCNNGG	5 cut(s)	244, 561, 744, 962, 1315
BssMI	GATC	5 cut(s)	172, 235, 240, 1037, 1306
BssNAI	GTATAC	1 cut(s)	589
BssNI	GRCGYC	1 cut(s)	1259
BssT1I	CCWWGG	3 cut(s)	244, 744, 1315
Bst1107I	GTATAC	1 cut(s)	589
Bst2UI	CCWGG	5 cut(s)	659, 909, 963, 1146, 1335
Bst4CI	ACNGT	2 cut(s)	1029, 1087
BstACI	GRCGYC	1 cut(s)	1259
BstAPI	GCANNNNNTGC	3 cut(s)	176, 740, 1223
BstAUI	TGTACA	1 cut(s)	1082
BstBAI	YACGTR	1 cut(s)	877
BstC8I	GCNNGC	3 cut(s)	797, 1263, 1444
BstDEI	CTNAG	4 cut(s)	343, 409, 545, 973
BstDSI	CCRYGG	3 cut(s)	561, 744, 1315
BstF5I	GGATG	3 cut(s)	86, 904, 1099
BstH2I	RGCGCY	1 cut(s)	128
BstHHI	GCGC	1 cut(s)	127
BstKTI	GATC	5 cut(s)	175, 238, 243, 1040, 1309
BstMAI	GTCTC	1 cut(s)	976
BstMBI	GATC	5 cut(s)	172, 235, 240, 1037, 1306
BstMWI	GCNNNNNNNGC	5 cut(s)	176, 419, 740, 1052, 1223
BstNI	CCWGG	5 cut(s)	659, 909, 963, 1146, 1335
BstNSI	RCATGY	3 cut(s)	155, 610, 1272
BstSCI	CCNGG	5 cut(s)	657, 907, 961, 1144, 1333
BstSFI	CTRYAG	2 cut(s)	270, 1263
BstSLI	GKGCMC	1 cut(s)	394
BstV1I	GCAGC	6 cut(s)	284, 358, 743, 1108, 1276, 1277
BstV2I	GAAGAC	1 cut(s)	1262
BstX2I	RGATCY	1 cut(s)	240
BstYI	RGATCY	1 cut(s)	240
BstZ17I	GTATAC	1 cut(s)	589
BsuI	GTATCC	2 cut(s)	295, 946
BsuRI	GGCC	2 cut(s)	799, 967
BtgI	CCRYGG	3 cut(s)	561, 744, 1315
BtsCI	GGATG	3 cut(s)	86, 904, 1099
BtsI	GCAGTG	2 cut(s)	267, 641
BtsIMutI	CAGTG	5 cut(s)	267, 394, 518, 641, 1098
Cac8I	GCNNGC	3 cut(s)	797, 1263, 1444
CfoI	GCGC	1 cut(s)	127
Cfr13I	GGNCC	5 cut(s)	349, 535, 798, 965, 1142
CseI	GACGC	1 cut(s)	1267
Csp6I	GTAC	4 cut(s)	400, 924, 1083, 1451
CspCI	CAANNNNNGTGG	2 cut(s)	168, 203
CviAII	CATG	7 cut(s)	152, 541, 607, 745, 1269, 1316, 1460
CviQI	GTAC	4 cut(s)	400, 924, 1083, 1451
DdeI	CTNAG	4 cut(s)	343, 409, 545, 973
DpnI	GATC	5 cut(s)	174, 237, 242, 1039, 1308
DpnII	GATC	5 cut(s)	172, 235, 240, 1037, 1306
DraI	TTTAAA	1 cut(s)	132
Eco130I	CCWWGG	3 cut(s)	244, 744, 1315
Eco24I	GRGCYC	1 cut(s)	569
Eco47I	GGWCC	3 cut(s)	349, 535, 1142
Eco47III	AGCGCT	1 cut(s)	126
Eco57I	CTGAAG	2 cut(s)	29, 1100
Eco72I	CACGTG	1 cut(s)	877
EcoO109I	RGGNCCY	1 cut(s)	349
EcoRI	GAATTC	1 cut(s)	1387
EcoRII	CCWGG	5 cut(s)	657, 907, 961, 1144, 1333
EcoT14I	CCWWGG	3 cut(s)	244, 744, 1315
EcoT22I	ATGCAT	1 cut(s)	1228
EcoT38I	GRGCYC	1 cut(s)	569
ErhI	CCWWGG	3 cut(s)	244, 744, 1315
FaeI	CATG	7 cut(s)	155, 544, 610, 748, 1272, 1319, 1463
FaqI	GGGAC	1 cut(s)	521
FatI	CATG	7 cut(s)	151, 540, 606, 744, 1268, 1315, 1459
FbaI	TGATCA	1 cut(s)	235
FblI	GTMKAC	1 cut(s)	588
Fnu4HI	GCNGC	6 cut(s)	273, 372, 732, 1122, 1266, 1290
FokI	GGATG	3 cut(s)	73, 891, 1106
FriOI	GRGCYC	1 cut(s)	569
Fsp4HI	GCNGC	6 cut(s)	273, 372, 732, 1122, 1266, 1290
FspBI	CTAG	1 cut(s)	1127
GlaI	GCGC	1 cut(s)	126
GluI	GCNGC	6 cut(s)	273, 372, 732, 1122, 1266, 1290
GsaI	CCCAGC	2 cut(s)	142, 314
GsuI	CTGGAG	1 cut(s)	641
HaeII	RGCGCY	1 cut(s)	128
HaeIII	GGCC	2 cut(s)	799, 967
HapII	CCGG	1 cut(s)	157
HgaI	GACGC	1 cut(s)	1267
HhaI	GCGC	1 cut(s)	127
Hin1I	GRCGYC	1 cut(s)	1259
Hin1II	CATG	7 cut(s)	155, 544, 610, 748, 1272, 1319, 1463
Hin6I	GCGC	1 cut(s)	125
HinP1I	GCGC	1 cut(s)	125
HincII	GTYRAC	1 cut(s)	1032
HindII	GTYRAC	1 cut(s)	1032
HindIII	AAGCTT	1 cut(s)	11
HinfI	GANTC	6 cut(s)	482, 523, 680, 788, 812, 1403
HpaII	CCGG	1 cut(s)	157
HphI	GGTGA	4 cut(s)	754, 821, 1155, 1288
Hpy166II	GTNNAC	5 cut(s)	392, 561, 589, 1032, 1142
Hpy188I	TCNGA	7 cut(s)	9, 97, 240, 346, 576, 976, 1248
Hpy188III	TCNNGA	2 cut(s)	431, 1041
Hpy8I	GTNNAC	5 cut(s)	392, 561, 589, 1032, 1142
HpyAV	CCTTC	2 cut(s)	504, 514
HpyCH4III	ACNGT	2 cut(s)	1029, 1087
HpyCH4IV	ACGT	2 cut(s)	876, 1220
HpyF10VI	GCNNNNNNNGC	5 cut(s)	176, 419, 740, 1052, 1223
HpyF3I	CTNAG	4 cut(s)	343, 409, 545, 973
HpySE526I	ACGT	2 cut(s)	876, 1220
Hsp92I	GRCGYC	1 cut(s)	1259
Hsp92II	CATG	7 cut(s)	155, 544, 610, 748, 1272, 1319, 1463
HspAI	GCGC	1 cut(s)	125
Ksp22I	TGATCA	1 cut(s)	235
Kzo9I	GATC	5 cut(s)	172, 235, 240, 1037, 1306
LmnI	GCTCC	2 cut(s)	1043, 1381
Lsp1109I	GCAGC	6 cut(s)	284, 358, 743, 1108, 1276, 1277
LweI	GCATC	6 cut(s)	157, 567, 706, 718, 988, 1101
MaeI	CTAG	1 cut(s)	1127
MaeII	ACGT	2 cut(s)	876, 1220
MaeIII	GTNAC	2 cut(s)	781, 1271
MalI	GATC	5 cut(s)	174, 237, 242, 1039, 1308
MbiI	CCGCTC	1 cut(s)	516
MboI	GATC	5 cut(s)	172, 235, 240, 1037, 1306
MboII	GAAGA	6 cut(s)	68, 456, 991, 1267, 1398, 1401
MflI	RGATCY	1 cut(s)	240
MhlI	GDGCHC	2 cut(s)	394, 569
MluCI	AATT	6 cut(s)	144, 249, 262, 277, 862, 1387
MnlI	CCTC	9 cut(s)	101, 340, 371, 392, 468, 478, 663, 811, 943
Mph1103I	ATGCAT	1 cut(s)	1228
MseI	TTAA	5 cut(s)	131, 510, 582, 756, 866
MslI	CAYNNNNRTG	1 cut(s)	1431
MspA1I	CMGCKG	1 cut(s)	1473
MspI	CCGG	1 cut(s)	157
MspR9I	CCNGG	5 cut(s)	659, 909, 963, 1146, 1335
MvaI	CCWGG	5 cut(s)	659, 909, 963, 1146, 1335
MwoI	GCNNNNNNNGC	5 cut(s)	176, 419, 740, 1052, 1223
NcoI	CCATGG	2 cut(s)	744, 1315
NdeII	GATC	5 cut(s)	172, 235, 240, 1037, 1306
NlaIII	CATG	7 cut(s)	155, 544, 610, 748, 1272, 1319, 1463
NlaIV	GGNNCC	3 cut(s)	537, 1321, 1357
NmuCI	GTSAC	2 cut(s)	781, 1271
NsiI	ATGCAT	1 cut(s)	1228
NspI	RCATGY	3 cut(s)	155, 610, 1272
PciI	ACATGT	1 cut(s)	151
PfeI	GAWTC	6 cut(s)	482, 523, 680, 788, 812, 1403
PflMI	CCANNNNNTGG	1 cut(s)	1316
PfoI	TCCNGGA	2 cut(s)	907, 1333
PkrI	GCNGC	6 cut(s)	274, 373, 733, 1123, 1267, 1291
PmaCI	CACGTG	1 cut(s)	877
PmlI	CACGTG	1 cut(s)	877
Ppu21I	YACGTR	1 cut(s)	877
PpuMI	RGGWCCY	1 cut(s)	349
PscI	ACATGT	1 cut(s)	151
Psp5II	RGGWCCY	1 cut(s)	349
Psp6I	CCWGG	5 cut(s)	657, 907, 961, 1144, 1333
PspCI	CACGTG	1 cut(s)	877
PspFI	CCCAGC	2 cut(s)	138, 310
PspGI	CCWGG	5 cut(s)	657, 907, 961, 1144, 1333
PspN4I	GGNNCC	3 cut(s)	537, 1321, 1357
PspPI	GGNCC	5 cut(s)	349, 535, 798, 965, 1142
PspPPI	RGGWCCY	1 cut(s)	349
PstI	CTGCAG	2 cut(s)	274, 1267
PsuI	RGATCY	1 cut(s)	240
PvuII	CAGCTG	1 cut(s)	1473
RsaI	GTAC	4 cut(s)	401, 925, 1084, 1452
RsaNI	GTAC	4 cut(s)	400, 924, 1083, 1451
RseI	CAYNNNNRTG	1 cut(s)	1431
SaqAI	TTAA	5 cut(s)	131, 510, 582, 756, 866
SatI	GCNGC	6 cut(s)	273, 372, 732, 1122, 1266, 1290
Sau3AI	GATC	5 cut(s)	172, 235, 240, 1037, 1306
Sau96I	GGNCC	5 cut(s)	349, 535, 798, 965, 1142
ScaI	AGTACT	2 cut(s)	925, 1452
ScrFI	CCNGG	5 cut(s)	659, 909, 963, 1146, 1335
SduI	GDGCHC	2 cut(s)	394, 569
SfaNI	GCATC	6 cut(s)	157, 567, 706, 718, 988, 1101
SfcI	CTRYAG	2 cut(s)	270, 1263
SinI	GGWCC	3 cut(s)	349, 535, 1142
SmiMI	CAYNNNNRTG	1 cut(s)	1431
SmlI	CTYRAG	2 cut(s)	114, 395
SmoI	CTYRAG	2 cut(s)	114, 395
Sse9I	AATT	6 cut(s)	144, 249, 262, 277, 862, 1387
SsiI	CCGC	1 cut(s)	514
SspMI	CTAG	1 cut(s)	1127
StyD4I	CCNGG	5 cut(s)	657, 907, 961, 1144, 1333
StyI	CCWWGG	3 cut(s)	244, 744, 1315
TaaI	ACNGT	2 cut(s)	1029, 1087
TaiI	ACGT	2 cut(s)	879, 1223
TaqI	TCGA	1 cut(s)	148
TasI	AATT	6 cut(s)	144, 249, 262, 277, 862, 1387
TatI	WGTACW	4 cut(s)	399, 923, 1082, 1450
TfiI	GAWTC	6 cut(s)	482, 523, 680, 788, 812, 1403
Tru1I	TTAA	5 cut(s)	131, 510, 582, 756, 866
Tru9I	TTAA	5 cut(s)	131, 510, 582, 756, 866
TscAI	CASTG	5 cut(s)	274, 394, 525, 648, 1105
TseFI	GTSAC	2 cut(s)	781, 1271
TseI	GCWGC	6 cut(s)	272, 371, 731, 1121, 1265, 1289
Tsp45I	GTSAC	2 cut(s)	781, 1271
TspDTI	ATGAA	6 cut(s)	69, 474, 919, 951, 1206, 1448
TspRI	CASTG	5 cut(s)	274, 394, 525, 648, 1105
Van91I	CCANNNNNTGG	1 cut(s)	1316
VneI	GTGCAC	1 cut(s)	390
VpaK11BI	GGWCC	3 cut(s)	349, 535, 1142
XapI	RAATTY	2 cut(s)	144, 1387
XceI	RCATGY	3 cut(s)	155, 610, 1272
XmiI	GTMKAC	1 cut(s)	588
XspI	CTAG	1 cut(s)	1127
ZrmI	AGTACT	2 cut(s)	925, 1452
Zsp2I	ATGCAT	1 cut(s)	1228

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.